RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 TAF4BQ92750 862 aa9.21□□□□□ -0.94
SHPRH-208ENST00000520752 FERMT2Q96AC1 680 aa9.21□□□□□ -0.94
SHPRH-208ENST00000520752 CCDC42Q96M95 316 aa9.21□□□□□ -0.94
SHPRH-208ENST00000520752 SLC39A3Q9BRY0 314 aa9.21□□□□□ -0.94
SHPRH-208ENST00000520752 SPON2Q9BUD6 331 aa9.21□□□□□ -0.94
SHPRH-208ENST00000520752 TMEM109Q9BVC6 243 aa9.21□□□□□ -0.94
SHPRH-208ENST00000520752 AGXT2Q9BYV1 514 aa9.21□□□□□ -0.94
SHPRH-208ENST00000520752 UNKQ9C0B0 810 aaKnown RBP9.21□□□□□ -0.94
SHPRH-208ENST00000520752 CCDC68Q9H2F9 335 aa9.21□□□□□ -0.94
SHPRH-208ENST00000520752 DPH5Q9H2P9 285 aa9.21□□□□□ -0.94
SHPRH-208ENST00000520752 TLE6Q9H808 572 aa9.21□□□□□ -0.94
SHPRH-208ENST00000520752 SEL1LQ9UBV2 794 aa9.21□□□□□ -0.94
SHPRH-208ENST00000520752 DNAJB4Q9UDY4 337 aa9.21□□□□□ -0.94
SHPRH-208ENST00000520752 NFU1Q9UMS0 254 aa9.21□□□□□ -0.94
SHPRH-208ENST00000520752 PCDHA4Q9UN74 947 aa9.21□□□□□ -0.94
SHPRH-208ENST00000520752 KIF20BQ96Q89 1820 aa9.2□□□□□ -0.94
SHPRH-208ENST00000520752 A0A0U1RQJ8 604 aa9.2□□□□□ -0.94
SHPRH-208ENST00000520752 ARHGAP10A1A4S6 786 aa9.2□□□□□ -0.94
SHPRH-208ENST00000520752 SH3PXD2BA1X283 911 aa9.2□□□□□ -0.94
SHPRH-208ENST00000520752 SRGAP2O75044 1071 aa9.2□□□□□ -0.94
SHPRH-208ENST00000520752 CILPO75339 1184 aa9.2□□□□□ -0.94
SHPRH-208ENST00000520752 BBOX1O75936 387 aa9.2□□□□□ -0.94
SHPRH-208ENST00000520752 HEXIM1O94992 359 aaKnown RBP9.2□□□□□ -0.94
SHPRH-208ENST00000520752 ZBED1O96006 694 aa9.2□□□□□ -0.94
SHPRH-208ENST00000520752 MYCLP1P12525 358 aaPredicted RBP9.2□□□□□ -0.94
SHPRH-208ENST00000520752 SERPINB3P29508 390 aa9.2□□□□□ -0.94
SHPRH-208ENST00000520752 PRKAR2BP31323 418 aa9.2□□□□□ -0.94
SHPRH-208ENST00000520752 CTNNA1P35221 906 aaKnown RBP9.2□□□□□ -0.94
SHPRH-208ENST00000520752 FXR1P51114 621 aaKnown RBP eCLIP9.2□□□□□ -0.94
SHPRH-208ENST00000520752 HERVK_113P62684 666 aa9.2□□□□□ -0.94
SHPRH-208ENST00000520752 SLC34A1Q06495 639 aa9.2□□□□□ -0.94
SHPRH-208ENST00000520752 MSLNQ13421 630 aaPredicted RBP9.2□□□□□ -0.94
SHPRH-208ENST00000520752 CCDC6Q16204 474 aa9.2□□□□□ -0.94
SHPRH-208ENST00000520752 KRT24Q2M2I5 525 aa9.2□□□□□ -0.94
SHPRH-208ENST00000520752 TCERG1LQ5VWI1 586 aa9.2□□□□□ -0.94
SHPRH-208ENST00000520752 TSHZ3Q63HK5 1081 aa9.2□□□□□ -0.94
SHPRH-208ENST00000520752 BTNL9Q6UXG8 535 aa9.2□□□□□ -0.94
SHPRH-208ENST00000520752 PPP1R42Q7Z4L9 355 aa9.2□□□□□ -0.94
SHPRH-208ENST00000520752 PATL1Q86TB9 770 aaKnown RBP9.2□□□□□ -0.94
SHPRH-208ENST00000520752 DDX42Q86XP3 938 aaKnown RBP eCLIP9.2□□□□□ -0.94
SHPRH-208ENST00000520752 SLC7A5P1Q8MH63 180 aa9.2□□□□□ -0.94
SHPRH-208ENST00000520752 SPATA20Q8TB22 786 aa9.2□□□□□ -0.94
SHPRH-208ENST00000520752 TBC1D16Q8TBP0 767 aa9.2□□□□□ -0.94
SHPRH-208ENST00000520752 ABTB1Q969K4 478 aaPredicted RBP9.2□□□□□ -0.94
SHPRH-208ENST00000520752 SNF8Q96H20 258 aa9.2□□□□□ -0.94
SHPRH-208ENST00000520752 ANKRD36BP1Q96IX9 119 aa9.2□□□□□ -0.94
SHPRH-208ENST00000520752 NUP88Q99567 741 aaPredicted RBP9.2□□□□□ -0.94
SHPRH-208ENST00000520752 ELAC2Q9BQ52 826 aaKnown RBP9.2□□□□□ -0.94
SHPRH-208ENST00000520752 NT5C1AQ9BXI3 368 aa9.2□□□□□ -0.94
SHPRH-208ENST00000520752 SLC12A5Q9H2X9 1139 aa9.2□□□□□ -0.94
SHPRH-208ENST00000520752 PARVGQ9HBI0 331 aa9.2□□□□□ -0.94
SHPRH-208ENST00000520752 EPB41L5Q9HCM4 733 aa9.2□□□□□ -0.94
SHPRH-208ENST00000520752 ECHDC1Q9NTX5 307 aa9.2□□□□□ -0.94
SHPRH-208ENST00000520752 ABCF3Q9NUQ8 709 aa9.2□□□□□ -0.94
SHPRH-208ENST00000520752 NMRK1Q9NWW6 199 aa9.2□□□□□ -0.94
SHPRH-208ENST00000520752 STK32BQ9NY57 414 aa9.2□□□□□ -0.94
SHPRH-208ENST00000520752 C6orf203Q9P0P8 240 aaPredicted RBP9.2□□□□□ -0.94
SHPRH-208ENST00000520752 ZMAT5Q9UDW3 170 aaKnown RBP9.2□□□□□ -0.94
SHPRH-208ENST00000520752 CNOT8Q9UFF9 292 aaKnown RBP9.2□□□□□ -0.94
SHPRH-208ENST00000520752 CCPG1Q9ULG6 757 aa9.2□□□□□ -0.94
SHPRH-208ENST00000520752 STK38LQ9Y2H1 464 aa9.2□□□□□ -0.94
SHPRH-208ENST00000520752 STXBP5LQ9Y2K9 1186 aa9.2□□□□□ -0.94
SHPRH-208ENST00000520752 SNCAIPQ9Y6H5 919 aa9.2□□□□□ -0.94
SHPRH-208ENST00000520752 CACNA1FO60840 1977 aa9.2□□□□□ -0.94
SHPRH-208ENST00000520752 MED23Q9ULK4 1368 aa9.2□□□□□ -0.94
SHPRH-208ENST00000520752 MLH3Q9UHC1 1453 aa9.2□□□□□ -0.94
SHPRH-208ENST00000520752 AGLP35573 1532 aa9.2□□□□□ -0.94
SHPRH-208ENST00000520752 CCDC169A6NNP5 214 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 NDC80O14777 642 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 TEX33O43247 280 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 STK10O94804 968 aaKnown RBP9.19□□□□□ -0.94
SHPRH-208ENST00000520752 GDF11O95390 407 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 AGTP01019 485 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 GSTT2P0CG29 244 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 GSTT2BP0CG30 244 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 CYP2C9P11712 490 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 RPL17P18621 184 aaKnown RBP9.19□□□□□ -0.94
SHPRH-208ENST00000520752 KRT4P19013 534 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 NFKBIAP25963 317 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 S100A5P33763 92 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 CARSP49589 748 aaKnown RBP9.19□□□□□ -0.94
SHPRH-208ENST00000520752 TMED10P49755 219 aaKnown RBP9.19□□□□□ -0.94
SHPRH-208ENST00000520752 MAGOHP61326 146 aaKnown RBP9.19□□□□□ -0.94
SHPRH-208ENST00000520752 CTAG1AP78358 180 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 XIAPP98170 497 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 RPL6Q02878 288 aaKnown RBP9.19□□□□□ -0.94
SHPRH-208ENST00000520752 RELAQ04206 551 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 DMPKQ09013 629 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 TUBA3CQ13748 450 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 RASGRF1Q13972 1273 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 ZCWPW2Q504Y3 356 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 AKAP4Q5JQC9 854 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 FDX2Q6P4F2 183 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 BORAQ6PGQ7 559 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 TMTC3Q6ZXV5 915 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 ZNF804AQ7Z570 1209 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 LRRC34Q8IZ02 419 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 TMEM151AQ8N4L1 468 aa9.19□□□□□ -0.94
SHPRH-208ENST00000520752 C12orf50Q8NA57 414 aaPredicted RBP9.19□□□□□ -0.94
SHPRH-208ENST00000520752 MAGOHBQ96A72 148 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms