RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 ACSF2Q96CM8 615 aaPredicted RBP10.81□□□□□ -0.68
MCF2-209ENST00000520602 KREMEN1Q96MU8 473 aa10.81□□□□□ -0.68
MCF2-209ENST00000520602 RUNDC3BQ96NL0 473 aa10.81□□□□□ -0.68
MCF2-209ENST00000520602 HESX1Q9UBX0 185 aa10.81□□□□□ -0.68
MCF2-209ENST00000520602 PYGMP11217 842 aa10.81□□□□□ -0.68
MCF2-209ENST00000520602 JAM2P57087 298 aa10.81□□□□□ -0.68
MCF2-209ENST00000520602 IFT88Q13099 833 aa10.81□□□□□ -0.68
MCF2-209ENST00000520602 FAM47CQ5HY64 1035 aa10.81□□□□□ -0.68
MCF2-209ENST00000520602 ATF7IP2Q5U623 682 aa10.81□□□□□ -0.68
MCF2-209ENST00000520602 CATSPER4Q7RTX7 472 aa10.81□□□□□ -0.68
MCF2-209ENST00000520602 APBB1IPQ7Z5R6 666 aaPredicted RBP10.81□□□□□ -0.68
MCF2-209ENST00000520602 RFX6Q8HWS3 928 aa10.81□□□□□ -0.68
MCF2-209ENST00000520602 RNF169Q8NCN4 708 aa10.81□□□□□ -0.68
MCF2-209ENST00000520602 MORC4Q8TE76 937 aa10.81□□□□□ -0.68
MCF2-209ENST00000520602 ZNF526Q8TF50 670 aaPredicted RBP10.81□□□□□ -0.68
MCF2-209ENST00000520602 NSRP1Q9H0G5 558 aaKnown RBP10.81□□□□□ -0.68
MCF2-209ENST00000520602 INTS9Q9NV88 658 aaKnown RBP10.81□□□□□ -0.68
MCF2-209ENST00000520602 ZMYM2Q9UBW7 1377 aa10.81□□□□□ -0.68
MCF2-209ENST00000520602 SLX4Q8IY92 1834 aa10.81□□□□□ -0.68
MCF2-209ENST00000520602 DDX60LQ5H9U9 1706 aaKnown RBP10.81□□□□□ -0.68
MCF2-209ENST00000520602 SPATA31C2B4DYI2 1134 aa10.81□□□□□ -0.68
MCF2-209ENST00000520602 KIAA0391O15091 583 aaKnown RBP10.81□□□□□ -0.68
MCF2-209ENST00000520602 SLC25A27O95847 323 aa10.81□□□□□ -0.68
MCF2-209ENST00000520602 IRAK1P51617 712 aa10.81□□□□□ -0.68
MCF2-209ENST00000520602 MYL6P60660 151 aa10.81□□□□□ -0.68
MCF2-209ENST00000520602 PSMC1P62191 440 aaKnown RBP10.81□□□□□ -0.68
MCF2-209ENST00000520602 SLMAPQ14BN4 828 aa10.81□□□□□ -0.68
MCF2-209ENST00000520602 CCDC38Q502W7 563 aa10.81□□□□□ -0.68
MCF2-209ENST00000520602 METTL7BQ6UX53 244 aa10.81□□□□□ -0.68
MCF2-209ENST00000520602 ATP8B4Q8TF62 1192 aa10.81□□□□□ -0.68
MCF2-209ENST00000520602 KIAA1551Q9HCM1 1747 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 SYNJ2BP-COX16A0A087WUM0 186 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 GJB6O95452 261 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 SYF2O95926 243 aaKnown RBP10.8□□□□□ -0.68
MCF2-209ENST00000520602 CYP2C8P10632 490 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 ADSSP30520 456 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 KRT81Q14533 505 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 GPAT2Q6NUI2 795 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 CROCCP2Q86T23 111 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 FAM71AQ8IYT1 594 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 FBXO25Q8TCJ0 367 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 HSPH1Q92598 858 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 OPTNQ96CV9 577 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 MCEEQ96PE7 176 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 PCDHB18PQ96TA0 734 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 PARVAQ9NVD7 372 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 COX16Q9P0S2 106 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 MED7O43513 233 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 TOM1L1O75674 476 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 GJB1P08034 283 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 ATP5DP30049 168 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 MAN1A1P33908 653 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 LAMTOR4Q0VGL1 99 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 CYP4A22Q5TCH4 519 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 KCNV1Q6PIU1 500 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 TRIM72Q6ZMU5 477 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 KCTD6Q8NC69 237 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 C1orf131Q8NDD1 294 aaKnown RBP10.8□□□□□ -0.68
MCF2-209ENST00000520602 SCFD2Q8WU76 684 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 ALG3Q92685 438 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 EFCC1Q9HA90 598 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 MLXIPLQ9NP71 852 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 ASB14A6NK59 587 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 GOLGA8MH3BSY2 632 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 CALB1P05937 261 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 RALAP11233 206 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 EIF3BP55884 814 aaKnown RBP10.8□□□□□ -0.68
MCF2-209ENST00000520602 SGSM1Q2NKQ1 1148 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 GJC2Q5T442 439 aaPredicted RBP10.8□□□□□ -0.68
MCF2-209ENST00000520602 DAB2IPQ5VWQ8 1189 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 LLGL2Q6P1M3 1020 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 ABHD15Q6UXT9 468 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 CCDC13Q8IYE1 715 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 SHC3Q92529 594 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 PORCNQ9H237 461 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 NGRNQ9NPE2 291 aaKnown RBP10.8□□□□□ -0.68
MCF2-209ENST00000520602 PPP2R3BQ9Y5P8 575 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 MAST2Q6P0Q8 1798 aa10.8□□□□□ -0.68
MCF2-209ENST00000520602 OGTO15294 1046 aa10.79□□□□□ -0.68
MCF2-209ENST00000520602 MYBL1P10243 752 aa10.79□□□□□ -0.68
MCF2-209ENST00000520602 SEC24CP53992 1094 aa10.79□□□□□ -0.68
MCF2-209ENST00000520602 RPS6KC1Q96S38 1066 aa10.79□□□□□ -0.68
MCF2-209ENST00000520602 GDF3Q9NR23 364 aa10.79□□□□□ -0.68
MCF2-209ENST00000520602 HOMER3Q9NSC5 361 aa10.79□□□□□ -0.68
MCF2-209ENST00000520602 AGAP1Q9UPQ3 857 aa10.79□□□□□ -0.68
MCF2-209ENST00000520602 TELO2Q9Y4R8 837 aa10.79□□□□□ -0.68
MCF2-209ENST00000520602 H7C0C1 242 aa10.79□□□□□ -0.68
MCF2-209ENST00000520602 M0QYV0 167 aa10.79□□□□□ -0.68
MCF2-209ENST00000520602 USP2O75604 605 aaPredicted RBP10.79□□□□□ -0.68
MCF2-209ENST00000520602 ATP5OP48047 213 aa10.79□□□□□ -0.68
MCF2-209ENST00000520602 FMO1Q01740 532 aa10.79□□□□□ -0.68
MCF2-209ENST00000520602 SNAPC2Q13487 334 aa10.79□□□□□ -0.68
MCF2-209ENST00000520602 CAVIN3Q969G5 261 aa10.79□□□□□ -0.68
MCF2-209ENST00000520602 XPNPEP1Q9NQW7 623 aa10.79□□□□□ -0.68
MCF2-209ENST00000520602 SLC5A4Q9NY91 659 aa10.79□□□□□ -0.68
MCF2-209ENST00000520602 ERAP1Q9NZ08 941 aa10.79□□□□□ -0.68
MCF2-209ENST00000520602 IP6K2Q9UHH9 426 aa10.79□□□□□ -0.68
MCF2-209ENST00000520602 ADCY3O60266 1144 aa10.79□□□□□ -0.68
MCF2-209ENST00000520602 TJP3O95049 919 aa10.79□□□□□ -0.68
MCF2-209ENST00000520602 STX2P32856 288 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms