RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 SYDE2Q5VT97 1194 aa9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 DENND2CQ68D51 928 aa9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 C11orf63Q6NUN7 778 aa9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 RPAINQ86UA6 219 aa9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 CATSPER3Q86XQ3 398 aa9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 CACNA2D3Q8IZS8 1091 aa9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 SH2D3CQ8N5H7 860 aa9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 METTL13Q8N6R0 699 aa9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 ANKS4BQ8N8V4 417 aa9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 ADAMTS19Q8TE59 1207 aa9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 SEC14L1Q92503 715 aa9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 SLC35C1Q96A29 364 aa9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 CENPTQ96BT3 561 aa9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 HES6Q96HZ4 224 aa9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 CCT8L2Q96SF2 557 aa9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 PLVAPQ9BX97 442 aa9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 PACSIN1Q9BY11 444 aa9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 WDR11Q9BZH6 1224 aa9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 UPF3AQ9H1J1 476 aaKnown RBP9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 MTIF3Q9H2K0 278 aaKnown RBP9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 CERS4Q9HA82 394 aa9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 PARVGQ9HBI0 331 aa9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 A1CFQ9NQ94 594 aaKnown RBP9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 FAM153AQ9UHL3 310 aa9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 YBX2Q9Y2T7 364 aaKnown RBP9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 CAPN7Q9Y6W3 813 aa9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 FRMPD4Q14CM0 1322 aa9.27□□□□□ -0.93
CTNNA1-223ENST00000520520 CHD9Q3L8U1 2897 aa9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 NPHP3-ACAD11A0A0J9YXS1 232 aa9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 ASB14A6NK59 587 aa9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 F8VZ95 297 aa9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 PIK3CDO00329 1044 aa9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 PODXLO00592 558 aa9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 ATP2A1O14983 1001 aa9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 NKRFO15226 690 aaKnown RBP eCLIP9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 P4HA2O15460 535 aa9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 EDIL3O43854 480 aa9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 B4GALT4O60513 344 aa9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 SMPD1P17405 629 aa9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 SLC9A1P19634 815 aa9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 TNFAIP3P21580 790 aa9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 ATP5DP30049 168 aa9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 CHRNA3P32297 505 aa9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 HPDP32754 393 aaPredicted RBP9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 MNAT1P51948 309 aa9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 SNRPFP62306 86 aaKnown RBP9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 DR1Q01658 176 aa9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 GUCY1A3Q02108 690 aa9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 ADCY2Q08462 1091 aa9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 SPIRE1Q08AE8 756 aa9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 TCEAL1Q15170 157 aa9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 RAB30Q15771 203 aa9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 ARSHQ5FYA8 562 aa9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 FAM47CQ5HY64 1035 aa9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 PPP2R2DQ66LE6 453 aa9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 TTBK2Q6IQ55 1244 aa9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 TMC3Q7Z5M5 1100 aa9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 DEFB128Q7Z7B8 93 aa9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 NT5DC3Q86UY8 548 aa9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 PIK3R5Q8WYR1 880 aa9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 ZBTB9Q96C00 473 aa9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 CYFIP2Q96F07 1278 aa9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 NECAB3Q96P71 396 aaPredicted RBP9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 ASB2Q96Q27 587 aa9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 UHRF1Q96T88 793 aaPredicted RBP9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 APEX2Q9UBZ4 518 aa9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 MTUS1Q9ULD2 1270 aa9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 PACSIN2Q9UNF0 486 aaPredicted RBP9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 SAMM50Q9Y512 469 aa9.26□□□□□ -0.93
CTNNA1-223ENST00000520520 MYH10P35580 1976 aa9.25□□□□□ -0.93
CTNNA1-223ENST00000520520 ANKRD62A6NC57 917 aa9.25□□□□□ -0.93
CTNNA1-223ENST00000520520 ZSCAN5CA6NGD5 496 aaPredicted RBP9.25□□□□□ -0.93
CTNNA1-223ENST00000520520 RFXAPO00287 272 aa9.25□□□□□ -0.93
CTNNA1-223ENST00000520520 TRAPPC3O43617 180 aa9.25□□□□□ -0.93
CTNNA1-223ENST00000520520 PHF2O75151 1096 aa9.25□□□□□ -0.93
CTNNA1-223ENST00000520520 PPFIA2O75334 1257 aa9.25□□□□□ -0.93
CTNNA1-223ENST00000520520 AKAP3O75969 853 aa9.25□□□□□ -0.93
CTNNA1-223ENST00000520520 CD4P01730 458 aa9.25□□□□□ -0.93
CTNNA1-223ENST00000520520 MYL3P08590 195 aa9.25□□□□□ -0.93
CTNNA1-223ENST00000520520 NUDT7P0C024 238 aa9.25□□□□□ -0.93
CTNNA1-223ENST00000520520 NUDT17P0C025 328 aa9.25□□□□□ -0.93
CTNNA1-223ENST00000520520 GHRP10912 638 aa9.25□□□□□ -0.93
CTNNA1-223ENST00000520520 CYP2C9P11712 490 aa9.25□□□□□ -0.93
CTNNA1-223ENST00000520520 ACTN1P12814 892 aa9.25□□□□□ -0.93
CTNNA1-223ENST00000520520 HOXB1P14653 301 aaPredicted RBP9.25□□□□□ -0.93
CTNNA1-223ENST00000520520 MAN1A1P33908 653 aa9.25□□□□□ -0.93
CTNNA1-223ENST00000520520 SLC16A2P36021 539 aa9.25□□□□□ -0.93
CTNNA1-223ENST00000520520 FMO5P49326 533 aa9.25□□□□□ -0.93
CTNNA1-223ENST00000520520 SMTNP53814 917 aa9.25□□□□□ -0.93
CTNNA1-223ENST00000520520 OAZ1P54368 228 aa9.25□□□□□ -0.93
CTNNA1-223ENST00000520520 GALCP54803 685 aa9.25□□□□□ -0.93
CTNNA1-223ENST00000520520 DRG2P55039 364 aaKnown RBP9.25□□□□□ -0.93
CTNNA1-223ENST00000520520 MRPS25P82663 173 aaKnown RBP9.25□□□□□ -0.93
CTNNA1-223ENST00000520520 MRPS5P82675 430 aaKnown RBP9.25□□□□□ -0.93
CTNNA1-223ENST00000520520 ACTN3Q08043 901 aaPredicted RBP9.25□□□□□ -0.93
CTNNA1-223ENST00000520520 SLMAPQ14BN4 828 aa9.25□□□□□ -0.93
CTNNA1-223ENST00000520520 TTC19Q6DKK2 380 aaPredicted RBP9.25□□□□□ -0.93
CTNNA1-223ENST00000520520 USP17L6PQ6QN14 398 aa9.25□□□□□ -0.93
CTNNA1-223ENST00000520520 CEP128Q6ZU80 1094 aa9.25□□□□□ -0.93
CTNNA1-223ENST00000520520 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms