RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 RFX1P22670 979 aa9.2□□□□□ -0.94
VAPB-206ENST00000520497 HNRNPH3P31942 346 aaKnown RBP9.2□□□□□ -0.94
VAPB-206ENST00000520497 RAB27AP51159 221 aa9.2□□□□□ -0.94
VAPB-206ENST00000520497 JAM2P57087 298 aa9.2□□□□□ -0.94
VAPB-206ENST00000520497 POLR2FP61218 127 aaKnown RBP9.2□□□□□ -0.94
VAPB-206ENST00000520497 TLE2Q04725 743 aa9.2□□□□□ -0.94
VAPB-206ENST00000520497 GPNMBQ14956 572 aa9.2□□□□□ -0.94
VAPB-206ENST00000520497 MEA1Q16626 185 aa9.2□□□□□ -0.94
VAPB-206ENST00000520497 DUOXA2Q1HG44 320 aa9.2□□□□□ -0.94
VAPB-206ENST00000520497 XKR4Q5GH76 650 aa9.2□□□□□ -0.94
VAPB-206ENST00000520497 JADE1Q6IE81 842 aa9.2□□□□□ -0.94
VAPB-206ENST00000520497 PHLDB3Q6NSJ2 640 aa9.2□□□□□ -0.94
VAPB-206ENST00000520497 CYP26C1Q6V0L0 522 aa9.2□□□□□ -0.94
VAPB-206ENST00000520497 FAM43BQ6ZT52 329 aaPredicted RBP9.2□□□□□ -0.94
VAPB-206ENST00000520497 CACNA2D4Q7Z3S7 1137 aa9.2□□□□□ -0.94
VAPB-206ENST00000520497 MRPL10Q7Z7H8 261 aaKnown RBP9.2□□□□□ -0.94
VAPB-206ENST00000520497 TXLNBQ8N3L3 684 aa9.2□□□□□ -0.94
VAPB-206ENST00000520497 CXorf38Q8TB03 319 aa9.2□□□□□ -0.94
VAPB-206ENST00000520497 CPLX3Q8WVH0 158 aa9.2□□□□□ -0.94
VAPB-206ENST00000520497 LRCH3Q96II8 777 aa9.2□□□□□ -0.94
VAPB-206ENST00000520497 HTATIP2Q9BUP3 242 aa9.2□□□□□ -0.94
VAPB-206ENST00000520497 TRIM6Q9C030 488 aaPredicted RBP9.2□□□□□ -0.94
VAPB-206ENST00000520497 FAM105AQ9NUU6 356 aa9.2□□□□□ -0.94
VAPB-206ENST00000520497 RAB20Q9NX57 234 aa9.2□□□□□ -0.94
VAPB-206ENST00000520497 SNTG2Q9NY99 539 aa9.2□□□□□ -0.94
VAPB-206ENST00000520497 CNTN3Q9P232 1028 aa9.2□□□□□ -0.94
VAPB-206ENST00000520497 APEX2Q9UBZ4 518 aa9.2□□□□□ -0.94
VAPB-206ENST00000520497 TBX21Q9UL17 535 aa9.2□□□□□ -0.94
VAPB-206ENST00000520497 MYO6Q9UM54 1294 aa9.2□□□□□ -0.94
VAPB-206ENST00000520497 PLAGL2Q9UPG8 496 aa9.2□□□□□ -0.94
VAPB-206ENST00000520497 DERAQ9Y315 318 aa9.2□□□□□ -0.94
VAPB-206ENST00000520497 FHOD1Q9Y613 1164 aa9.2□□□□□ -0.94
VAPB-206ENST00000520497 PTPRDP23468 1912 aa9.2□□□□□ -0.94
VAPB-206ENST00000520497 UMODL1Q5DID0 1318 aa9.2□□□□□ -0.94
VAPB-206ENST00000520497 TRIOBPQ9H2D6 2365 aa9.19□□□□□ -0.94
VAPB-206ENST00000520497 NBNO60934 754 aa9.19□□□□□ -0.94
VAPB-206ENST00000520497 CXCL10P02778 98 aa9.19□□□□□ -0.94
VAPB-206ENST00000520497 TMEM191BP0C7N4 346 aa9.19□□□□□ -0.94
VAPB-206ENST00000520497 ZSCAN20P17040 1043 aaPredicted RBP9.19□□□□□ -0.94
VAPB-206ENST00000520497 ATF7P17544 494 aaPredicted RBP9.19□□□□□ -0.94
VAPB-206ENST00000520497 YARSP54577 528 aaKnown RBP9.19□□□□□ -0.94
VAPB-206ENST00000520497 ZBTB6Q15916 424 aa9.19□□□□□ -0.94
VAPB-206ENST00000520497 LRRC26Q2I0M4 334 aa9.19□□□□□ -0.94
VAPB-206ENST00000520497 PLEKHG4Q58EX7 1191 aa9.19□□□□□ -0.94
VAPB-206ENST00000520497 E4F1Q66K89 784 aaPredicted RBP9.19□□□□□ -0.94
VAPB-206ENST00000520497 IQCEQ6IPM2 695 aa9.19□□□□□ -0.94
VAPB-206ENST00000520497 PDXDC1Q6P996 788 aa9.19□□□□□ -0.94
VAPB-206ENST00000520497 GJB7Q6PEY0 223 aa9.19□□□□□ -0.94
VAPB-206ENST00000520497 WDR59Q6PJI9 974 aa9.19□□□□□ -0.94
VAPB-206ENST00000520497 TRAPPC11Q7Z392 1133 aa9.19□□□□□ -0.94
VAPB-206ENST00000520497 NECAB2Q7Z6G3 386 aa9.19□□□□□ -0.94
VAPB-206ENST00000520497 ARHGEF19Q8IW93 802 aa9.19□□□□□ -0.94
VAPB-206ENST00000520497 C1orf127Q8N9H9 656 aa9.19□□□□□ -0.94
VAPB-206ENST00000520497 OR8K1Q8NGG5 319 aa9.19□□□□□ -0.94
VAPB-206ENST00000520497 LINC01599Q8WXQ3 324 aa9.19□□□□□ -0.94
VAPB-206ENST00000520497 SYN2Q92777 582 aaPredicted RBP9.19□□□□□ -0.94
VAPB-206ENST00000520497 FAM212AQ96EL1 285 aa9.19□□□□□ -0.94
VAPB-206ENST00000520497 ANKRD36BP1Q96IX9 119 aa9.19□□□□□ -0.94
VAPB-206ENST00000520497 ZMAT2Q96NC0 199 aaKnown RBP9.19□□□□□ -0.94
VAPB-206ENST00000520497 TSPAN18Q96SJ8 248 aa9.19□□□□□ -0.94
VAPB-206ENST00000520497 IFIH1Q9BYX4 1025 aaKnown RBP9.19□□□□□ -0.94
VAPB-206ENST00000520497 WNT8AQ9H1J5 351 aa9.19□□□□□ -0.94
VAPB-206ENST00000520497 CXCL16Q9H2A7 254 aa9.19□□□□□ -0.94
VAPB-206ENST00000520497 HIPK3Q9H422 1215 aa9.19□□□□□ -0.94
VAPB-206ENST00000520497 NLRC4Q9NPP4 1024 aa9.19□□□□□ -0.94
VAPB-206ENST00000520497 KCND1Q9NSA2 647 aa9.19□□□□□ -0.94
VAPB-206ENST00000520497 SPTLC3Q9NUV7 552 aa9.19□□□□□ -0.94
VAPB-206ENST00000520497 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.19□□□□□ -0.94
VAPB-206ENST00000520497 AJAP1Q9UKB5 411 aaPredicted RBP9.19□□□□□ -0.94
VAPB-206ENST00000520497 PYCARDQ9ULZ3 195 aa9.19□□□□□ -0.94
VAPB-206ENST00000520497 PCDHB2Q9Y5E7 798 aa9.19□□□□□ -0.94
VAPB-206ENST00000520497 COL4A6Q14031 1691 aa9.19□□□□□ -0.94
VAPB-206ENST00000520497 A0A0U1RQF3 1178 aa9.18□□□□□ -0.94
VAPB-206ENST00000520497 LRRC53A6NM62 1247 aa9.18□□□□□ -0.94
VAPB-206ENST00000520497 PARNO95453 639 aaKnown RBP9.18□□□□□ -0.94
VAPB-206ENST00000520497 ASS1P00966 412 aaKnown RBP9.18□□□□□ -0.94
VAPB-206ENST00000520497 TNNC2P02585 160 aa9.18□□□□□ -0.94
VAPB-206ENST00000520497 CLTBP09497 229 aa9.18□□□□□ -0.94
VAPB-206ENST00000520497 CCDC175P0C221 793 aa9.18□□□□□ -0.94
VAPB-206ENST00000520497 KCNE1P15382 129 aa9.18□□□□□ -0.94
VAPB-206ENST00000520497 AKAP5P24588 427 aa9.18□□□□□ -0.94
VAPB-206ENST00000520497 CYLC1P35663 651 aaPredicted RBP9.18□□□□□ -0.94
VAPB-206ENST00000520497 PIK3CAP42336 1068 aa9.18□□□□□ -0.94
VAPB-206ENST00000520497 TFAMQ00059 246 aaKnown RBP9.18□□□□□ -0.94
VAPB-206ENST00000520497 CDK17Q00537 523 aa9.18□□□□□ -0.94
VAPB-206ENST00000520497 GCNT1Q02742 428 aa9.18□□□□□ -0.94
VAPB-206ENST00000520497 BIRC3Q13489 604 aa9.18□□□□□ -0.94
VAPB-206ENST00000520497 NCOA4Q13772 614 aa9.18□□□□□ -0.94
VAPB-206ENST00000520497 TMEM132DQ14C87 1099 aa9.18□□□□□ -0.94
VAPB-206ENST00000520497 SCARA3Q6AZY7 606 aa9.18□□□□□ -0.94
VAPB-206ENST00000520497 AGMOQ6ZNB7 445 aa9.18□□□□□ -0.94
VAPB-206ENST00000520497 RRAGAQ7L523 313 aa9.18□□□□□ -0.94
VAPB-206ENST00000520497 ZNF598Q86UK7 904 aaKnown RBP9.18□□□□□ -0.94
VAPB-206ENST00000520497 RTN4RL1Q86UN2 441 aaPredicted RBP9.18□□□□□ -0.94
VAPB-206ENST00000520497 NLRC5Q86WI3 1866 aa9.18□□□□□ -0.94
VAPB-206ENST00000520497 PLCD3Q8N3E9 789 aa9.18□□□□□ -0.94
VAPB-206ENST00000520497 HELQQ8TDG4 1101 aa9.18□□□□□ -0.94
VAPB-206ENST00000520497 GBF1Q92538 1859 aa9.18□□□□□ -0.94
VAPB-206ENST00000520497 NT5C1BQ96P26 610 aa9.18□□□□□ -0.94
VAPB-206ENST00000520497 ADAM2Q99965 735 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms