RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 CD69Q07108 199 aa8.65□□□□□ -1.02
SDCBP-208ENST00000520228 MCL1Q07820 350 aa8.65□□□□□ -1.02
SDCBP-208ENST00000520228 ADAM15Q13444 863 aa8.65□□□□□ -1.02
SDCBP-208ENST00000520228 NFYCQ13952 458 aa8.65□□□□□ -1.02
SDCBP-208ENST00000520228 MAN2A1Q16706 1144 aa8.65□□□□□ -1.02
SDCBP-208ENST00000520228 ANO4Q32M45 955 aa8.65□□□□□ -1.02
SDCBP-208ENST00000520228 ZMAT1Q5H9K5 638 aa8.65□□□□□ -1.02
SDCBP-208ENST00000520228 CLEC14AQ86T13 490 aa8.65□□□□□ -1.02
SDCBP-208ENST00000520228 AMOTL1Q8IY63 956 aa8.65□□□□□ -1.02
SDCBP-208ENST00000520228 FEZF2Q8TBJ5 459 aa8.65□□□□□ -1.02
SDCBP-208ENST00000520228 SSH1Q8WYL5 1049 aa8.65□□□□□ -1.02
SDCBP-208ENST00000520228 CHMP4CQ96CF2 233 aa8.65□□□□□ -1.02
SDCBP-208ENST00000520228 MKS1Q9NXB0 559 aa8.65□□□□□ -1.02
SDCBP-208ENST00000520228 IL16Q14005 1332 aa8.64□□□□□ -1.03
SDCBP-208ENST00000520228 TJP1Q07157 1748 aa8.64□□□□□ -1.03
SDCBP-208ENST00000520228 A0A1W2PR48 441 aa8.64□□□□□ -1.03
SDCBP-208ENST00000520228 C2orf78A6NCI8 922 aa8.64□□□□□ -1.03
SDCBP-208ENST00000520228 SASH1O94885 1247 aa8.64□□□□□ -1.03
SDCBP-208ENST00000520228 LY86O95711 162 aa8.64□□□□□ -1.03
SDCBP-208ENST00000520228 HOXB7P09629 217 aa8.64□□□□□ -1.03
SDCBP-208ENST00000520228 HGFACQ04756 655 aa8.64□□□□□ -1.03
SDCBP-208ENST00000520228 GPR162Q16538 588 aa8.64□□□□□ -1.03
SDCBP-208ENST00000520228 TBC1D9BQ66K14 1250 aa8.64□□□□□ -1.03
SDCBP-208ENST00000520228 BORAQ6PGQ7 559 aa8.64□□□□□ -1.03
SDCBP-208ENST00000520228 CLEC4GQ6UXB4 293 aa8.64□□□□□ -1.03
SDCBP-208ENST00000520228 KIF6Q6ZMV9 814 aa8.64□□□□□ -1.03
SDCBP-208ENST00000520228 USP30Q70CQ3 517 aa8.64□□□□□ -1.03
SDCBP-208ENST00000520228 WDR63Q8IWG1 891 aa8.64□□□□□ -1.03
SDCBP-208ENST00000520228 JADE3Q92613 823 aa8.64□□□□□ -1.03
SDCBP-208ENST00000520228 LPPQ93052 612 aa8.64□□□□□ -1.03
SDCBP-208ENST00000520228 KRTAP9-2Q9BYQ4 174 aa8.64□□□□□ -1.03
SDCBP-208ENST00000520228 IFT122Q9HBG6 1241 aa8.64□□□□□ -1.03
SDCBP-208ENST00000520228 DUSP10Q9Y6W6 482 aa8.64□□□□□ -1.03
SDCBP-208ENST00000520228 CICQ96RK0 1608 aaPredicted RBP8.64□□□□□ -1.03
SDCBP-208ENST00000520228 TAF1LQ8IZX4 1826 aa8.64□□□□□ -1.03
SDCBP-208ENST00000520228 QSER1Q2KHR3 1735 aa8.63□□□□□ -1.03
SDCBP-208ENST00000520228 B4GALT4O60513 344 aa8.63□□□□□ -1.03
SDCBP-208ENST00000520228 FSBPO95073 299 aa8.63□□□□□ -1.03
SDCBP-208ENST00000520228 CNOT4O95628 575 aaKnown RBP8.63□□□□□ -1.03
SDCBP-208ENST00000520228 SERPINB2P05120 415 aa8.63□□□□□ -1.03
SDCBP-208ENST00000520228 GAAP10253 952 aa8.63□□□□□ -1.03
SDCBP-208ENST00000520228 OSMP13725 252 aa8.63□□□□□ -1.03
SDCBP-208ENST00000520228 XPAP23025 273 aaPredicted RBP8.63□□□□□ -1.03
SDCBP-208ENST00000520228 TGFB2P61812 414 aa8.63□□□□□ -1.03
SDCBP-208ENST00000520228 ODF1Q14990 250 aa8.63□□□□□ -1.03
SDCBP-208ENST00000520228 RNF151Q2KHN1 245 aa8.63□□□□□ -1.03
SDCBP-208ENST00000520228 PROSER3Q2NL68 480 aa8.63□□□□□ -1.03
SDCBP-208ENST00000520228 ODR4Q5SWX8 454 aa8.63□□□□□ -1.03
SDCBP-208ENST00000520228 GLB1L2Q8IW92 636 aa8.63□□□□□ -1.03
SDCBP-208ENST00000520228 UNC5BQ8IZJ1 945 aa8.63□□□□□ -1.03
SDCBP-208ENST00000520228 LGI4Q8N135 537 aa8.63□□□□□ -1.03
SDCBP-208ENST00000520228 SCOCQ9UIL1 159 aa8.63□□□□□ -1.03
SDCBP-208ENST00000520228 UBR2Q8IWV8 1755 aa8.63□□□□□ -1.03
SDCBP-208ENST00000520228 COL5A3P25940 1745 aaPredicted RBP8.63□□□□□ -1.03
SDCBP-208ENST00000520228 UBR3Q6ZT12 1888 aa8.62□□□□□ -1.03
SDCBP-208ENST00000520228 A0A0G2JLW4 131 aa8.62□□□□□ -1.03
SDCBP-208ENST00000520228 KLHL33A6NCF5 533 aa8.62□□□□□ -1.03
SDCBP-208ENST00000520228 OTOL1A6NHN0 477 aaPredicted RBP8.62□□□□□ -1.03
SDCBP-208ENST00000520228 ERVV-1B6SEH8 477 aa8.62□□□□□ -1.03
SDCBP-208ENST00000520228 NPHP1O15259 732 aa8.62□□□□□ -1.03
SDCBP-208ENST00000520228 TMEM127O75204 238 aa8.62□□□□□ -1.03
SDCBP-208ENST00000520228 ANXA1P04083 346 aa8.62□□□□□ -1.03
SDCBP-208ENST00000520228 SLC5A3P53794 718 aa8.62□□□□□ -1.03
SDCBP-208ENST00000520228 NRG3P56975 720 aa8.62□□□□□ -1.03
SDCBP-208ENST00000520228 CDK17Q00537 523 aa8.62□□□□□ -1.03
SDCBP-208ENST00000520228 HLFQ16534 295 aa8.62□□□□□ -1.03
SDCBP-208ENST00000520228 C8orf58Q8NAV2 365 aa8.62□□□□□ -1.03
SDCBP-208ENST00000520228 PIK3C3Q8NEB9 887 aa8.62□□□□□ -1.03
SDCBP-208ENST00000520228 CFHR4Q92496 578 aa8.62□□□□□ -1.03
SDCBP-208ENST00000520228 TSR2Q969E8 191 aaKnown RBP8.62□□□□□ -1.03
SDCBP-208ENST00000520228 CHMP4AQ9BY43 222 aa8.62□□□□□ -1.03
SDCBP-208ENST00000520228 PARD6AQ9NPB6 346 aa8.62□□□□□ -1.03
SDCBP-208ENST00000520228 DDX21Q9NR30 783 aaKnown RBP eCLIP8.62□□□□□ -1.03
SDCBP-208ENST00000520228 CHPF2Q9P2E5 772 aa8.62□□□□□ -1.03
SDCBP-208ENST00000520228 DBF4Q9UBU7 674 aaPredicted RBP8.62□□□□□ -1.03
SDCBP-208ENST00000520228 INVSQ9Y283 1065 aa8.62□□□□□ -1.03
SDCBP-208ENST00000520228 SIPA1L3O60292 1781 aaPredicted RBP8.62□□□□□ -1.03
SDCBP-208ENST00000520228 MAP3K15Q6ZN16 1313 aa8.61□□□□□ -1.03
SDCBP-208ENST00000520228 MATN2O00339 956 aa8.61□□□□□ -1.03
SDCBP-208ENST00000520228 ARHGAP6O43182 974 aa8.61□□□□□ -1.03
SDCBP-208ENST00000520228 S100BP04271 92 aaPredicted RBP8.61□□□□□ -1.03
SDCBP-208ENST00000520228 DPEP1P16444 411 aa8.61□□□□□ -1.03
SDCBP-208ENST00000520228 ADAM8P78325 824 aa8.61□□□□□ -1.03
SDCBP-208ENST00000520228 MGAT5Q09328 741 aa8.61□□□□□ -1.03
SDCBP-208ENST00000520228 AIMP1Q12904 312 aaKnown RBP8.61□□□□□ -1.03
SDCBP-208ENST00000520228 ADRM1Q16186 407 aa8.61□□□□□ -1.03
SDCBP-208ENST00000520228 MBNL2Q5VZF2 373 aaKnown RBP8.61□□□□□ -1.03
SDCBP-208ENST00000520228 LMBR1LQ6UX01 489 aa8.61□□□□□ -1.03
SDCBP-208ENST00000520228 SPOCD1Q6ZMY3 1216 aa8.61□□□□□ -1.03
SDCBP-208ENST00000520228 COPS6Q7L5N1 327 aa8.61□□□□□ -1.03
SDCBP-208ENST00000520228 FRMD5Q7Z6J6 570 aa8.61□□□□□ -1.03
SDCBP-208ENST00000520228 ZBTB46Q86UZ6 589 aa8.61□□□□□ -1.03
SDCBP-208ENST00000520228 NBPF5PQ86XG9 351 aaPredicted RBP8.61□□□□□ -1.03
SDCBP-208ENST00000520228 PLA2G15Q8NCC3 412 aa8.61□□□□□ -1.03
SDCBP-208ENST00000520228 SLC7A6OSQ96CW6 309 aaPredicted RBP8.61□□□□□ -1.03
SDCBP-208ENST00000520228 USP40Q9NVE5 1235 aa8.61□□□□□ -1.03
SDCBP-208ENST00000520228 HYPKQ9NX55 129 aa8.61□□□□□ -1.03
SDCBP-208ENST00000520228 FAM184BQ9ULE4 1060 aa8.61□□□□□ -1.03
SDCBP-208ENST00000520228 NIP7Q9Y221 180 aaKnown RBP eCLIP8.61□□□□□ -1.03
SDCBP-208ENST00000520228 C10orf71Q711Q0 1435 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms