RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 PTPRJQ12913 1337 aa15.27■□□□□ 0.04
SDC2-203ENST00000519587 P4HA2O15460 535 aa15.27■□□□□ 0.04
SDC2-203ENST00000519587 MEFVO15553 781 aaPredicted RBP15.27■□□□□ 0.04
SDC2-203ENST00000519587 CBFA2T2O43439 604 aa15.27■□□□□ 0.04
SDC2-203ENST00000519587 POMCP01189 267 aa15.27■□□□□ 0.04
SDC2-203ENST00000519587 PIK3CAP42336 1068 aa15.27■□□□□ 0.04
SDC2-203ENST00000519587 FMO5P49326 533 aa15.27■□□□□ 0.04
SDC2-203ENST00000519587 COPB1P53618 953 aaKnown RBP15.27■□□□□ 0.04
SDC2-203ENST00000519587 DLG4P78352 724 aa15.27■□□□□ 0.04
SDC2-203ENST00000519587 KCNH2Q12809 1159 aa15.27■□□□□ 0.04
SDC2-203ENST00000519587 UVSSAQ2YD98 709 aa15.27■□□□□ 0.04
SDC2-203ENST00000519587 VWA3BQ502W6 1294 aa15.27■□□□□ 0.04
SDC2-203ENST00000519587 KRT39Q6A163 491 aa15.27■□□□□ 0.04
SDC2-203ENST00000519587 CCDC150Q8NCX0 1101 aa15.27■□□□□ 0.04
SDC2-203ENST00000519587 PLEKHO2Q8TD55 490 aa15.27■□□□□ 0.04
SDC2-203ENST00000519587 DDX27Q96GQ7 796 aaKnown RBP15.27■□□□□ 0.04
SDC2-203ENST00000519587 ZMAT2Q96NC0 199 aaKnown RBP15.27■□□□□ 0.04
SDC2-203ENST00000519587 CASD1Q96PB1 797 aa15.27■□□□□ 0.04
SDC2-203ENST00000519587 NDST4Q9H3R1 872 aa15.27■□□□□ 0.04
SDC2-203ENST00000519587 MMRN2Q9H8L6 949 aa15.27■□□□□ 0.04
SDC2-203ENST00000519587 DPP3Q9NY33 737 aa15.27■□□□□ 0.04
SDC2-203ENST00000519587 INSL6Q9Y581 213 aa15.27■□□□□ 0.04
SDC2-203ENST00000519587 GOLGA6L3A6NEY3 463 aa15.26■□□□□ 0.03
SDC2-203ENST00000519587 LGALS16A8MUM7 142 aa15.26■□□□□ 0.03
SDC2-203ENST00000519587 RBAK-RBAKDNI3L0D1 243 aa15.26■□□□□ 0.03
SDC2-203ENST00000519587 TLL1O43897 1013 aa15.26■□□□□ 0.03
SDC2-203ENST00000519587 CLSTN1O94985 981 aa15.26■□□□□ 0.03
SDC2-203ENST00000519587 RPL9P32969 192 aaKnown RBP15.26■□□□□ 0.03
SDC2-203ENST00000519587 GCLMP48507 274 aa15.26■□□□□ 0.03
SDC2-203ENST00000519587 WNT7BP56706 349 aa15.26■□□□□ 0.03
SDC2-203ENST00000519587 TRPC3Q13507 836 aa15.26■□□□□ 0.03
SDC2-203ENST00000519587 BTG3Q14201 252 aaPredicted RBP15.26■□□□□ 0.03
SDC2-203ENST00000519587 SHHQ15465 462 aa15.26■□□□□ 0.03
SDC2-203ENST00000519587 ZACNQ401N2 412 aa15.26■□□□□ 0.03
SDC2-203ENST00000519587 PAN2Q504Q3 1202 aaKnown RBP15.26■□□□□ 0.03
SDC2-203ENST00000519587 C9orf50Q5SZB4 431 aa15.26■□□□□ 0.03
SDC2-203ENST00000519587 LMBRD2Q68DH5 695 aaPredicted RBP15.26■□□□□ 0.03
SDC2-203ENST00000519587 GSTCDQ8NEC7 633 aa15.26■□□□□ 0.03
SDC2-203ENST00000519587 OR5B17Q8NGF7 314 aa15.26■□□□□ 0.03
SDC2-203ENST00000519587 ZNF560Q96MR9 790 aa15.26■□□□□ 0.03
SDC2-203ENST00000519587 POP1Q99575 1024 aaKnown RBP15.26■□□□□ 0.03
SDC2-203ENST00000519587 RAD9AQ99638 391 aa15.26■□□□□ 0.03
SDC2-203ENST00000519587 RC3H2Q9HBD1 1191 aaKnown RBP15.26■□□□□ 0.03
SDC2-203ENST00000519587 TUBGCP4Q9UGJ1 667 aa15.26■□□□□ 0.03
SDC2-203ENST00000519587 VCANP13611 3396 aa15.25■□□□□ 0.03
SDC2-203ENST00000519587 GBF1Q92538 1859 aa15.25■□□□□ 0.03
SDC2-203ENST00000519587 SPTBN5Q9NRC6 3674 aaKnown RBP15.25■□□□□ 0.03
SDC2-203ENST00000519587 KIAA1671Q9BY89 1806 aa15.25■□□□□ 0.03
SDC2-203ENST00000519587 GTPBP10A4D1E9 387 aaKnown RBP15.25■□□□□ 0.03
SDC2-203ENST00000519587 LRRC10BA6NIK2 292 aa15.25■□□□□ 0.03
SDC2-203ENST00000519587 PMM2O15305 246 aa15.25■□□□□ 0.03
SDC2-203ENST00000519587 KRT19P08727 400 aa15.25■□□□□ 0.03
SDC2-203ENST00000519587 PAX3P23760 479 aa15.25■□□□□ 0.03
SDC2-203ENST00000519587 PNPLA4P41247 253 aa15.25■□□□□ 0.03
SDC2-203ENST00000519587 GATMP50440 423 aa15.25■□□□□ 0.03
SDC2-203ENST00000519587 RBP5P82980 135 aa15.25■□□□□ 0.03
SDC2-203ENST00000519587 HTRA4P83105 476 aaPredicted RBP15.25■□□□□ 0.03
SDC2-203ENST00000519587 FANCCQ00597 558 aa15.25■□□□□ 0.03
SDC2-203ENST00000519587 PLCB2Q00722 1185 aa15.25■□□□□ 0.03
SDC2-203ENST00000519587 PPP3CAQ08209 521 aa15.25■□□□□ 0.03
SDC2-203ENST00000519587 DSC1Q08554 894 aa15.25■□□□□ 0.03
SDC2-203ENST00000519587 ZBTB6Q15916 424 aa15.25■□□□□ 0.03
SDC2-203ENST00000519587 MIIPQ5JXC2 388 aa15.25■□□□□ 0.03
SDC2-203ENST00000519587 C1orf220Q5T0J3 134 aa15.25■□□□□ 0.03
SDC2-203ENST00000519587 SV2AQ7L0J3 742 aa15.25■□□□□ 0.03
SDC2-203ENST00000519587 TRAPPC11Q7Z392 1133 aa15.25■□□□□ 0.03
SDC2-203ENST00000519587 FBXL13Q8NEE6 735 aa15.25■□□□□ 0.03
SDC2-203ENST00000519587 C18orf25Q96B23 403 aaPredicted RBP15.25■□□□□ 0.03
SDC2-203ENST00000519587 ZNF689Q96CS4 500 aaPredicted RBP15.25■□□□□ 0.03
SDC2-203ENST00000519587 GUCD1Q96NT3 240 aa15.25■□□□□ 0.03
SDC2-203ENST00000519587 VPS16Q9H269 839 aa15.25■□□□□ 0.03
SDC2-203ENST00000519587 PLAGL2Q9UPG8 496 aa15.25■□□□□ 0.03
SDC2-203ENST00000519587 ZC3H11AO75152 810 aaKnown RBP eCLIP15.24■□□□□ 0.038e-7■■□□□ 13.7
SDC2-203ENST00000519587 ITGB3P05106 788 aa15.24■□□□□ 0.03
SDC2-203ENST00000519587 LAG3P18627 525 aa15.24■□□□□ 0.03
SDC2-203ENST00000519587 LRPAP1P30533 357 aa15.24■□□□□ 0.03
SDC2-203ENST00000519587 UBASH3AP57075 661 aa15.24■□□□□ 0.03
SDC2-203ENST00000519587 MYO1EQ12965 1108 aa15.24■□□□□ 0.03
SDC2-203ENST00000519587 NCOA4Q13772 614 aa15.24■□□□□ 0.03
SDC2-203ENST00000519587 SPOUT1Q5T280 376 aaKnown RBP15.24■□□□□ 0.03
SDC2-203ENST00000519587 TDRD10Q5VZ19 366 aaKnown RBP15.24■□□□□ 0.03
SDC2-203ENST00000519587 SARM1Q6SZW1 724 aa15.24■□□□□ 0.03
SDC2-203ENST00000519587 GBP6Q6ZN66 633 aa15.24■□□□□ 0.03
SDC2-203ENST00000519587 TMCO2Q7Z6W1 182 aaPredicted RBP15.24■□□□□ 0.03
SDC2-203ENST00000519587 FIBCD1Q8N539 461 aa15.24■□□□□ 0.03
SDC2-203ENST00000519587 LRRC52Q8N7C0 313 aa15.24■□□□□ 0.03
SDC2-203ENST00000519587 C1orf127Q8N9H9 656 aa15.24■□□□□ 0.03
SDC2-203ENST00000519587 TAF4BQ92750 862 aa15.24■□□□□ 0.03
SDC2-203ENST00000519587 TMEM175Q9BSA9 504 aa15.24■□□□□ 0.03
SDC2-203ENST00000519587 AAASQ9NRG9 546 aa15.24■□□□□ 0.03
SDC2-203ENST00000519587 GCNT4Q9P109 453 aa15.24■□□□□ 0.03
SDC2-203ENST00000519587 NLRC5Q86WI3 1866 aa15.24■□□□□ 0.03
SDC2-203ENST00000519587 A0A1B0GTH6 734 aa15.23■□□□□ 0.03
SDC2-203ENST00000519587 CASTOR2A6NHX0 329 aa15.23■□□□□ 0.03
SDC2-203ENST00000519587 PODXLO00592 558 aa15.23■□□□□ 0.03
SDC2-203ENST00000519587 HLA-DRAP01903 254 aa15.23■□□□□ 0.03
SDC2-203ENST00000519587 C4BPAP04003 597 aaKnown RBP15.23■□□□□ 0.03
SDC2-203ENST00000519587 POLR2BP30876 1174 aaKnown RBP15.23■□□□□ 0.03
SDC2-203ENST00000519587 ATICP31939 592 aa15.23■□□□□ 0.03
SDC2-203ENST00000519587 PPM1AP35813 382 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms