RNA–Protein interactions for RNA: ENST00000519363.1

PABPC1-210, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-210ENST00000519363 KCNE1P15382 129 aa16.09■□□□□ 0.17
PABPC1-210ENST00000519363 ZSCAN20P17040 1043 aaPredicted RBP16.09■□□□□ 0.17
PABPC1-210ENST00000519363 CYLC1P35663 651 aaPredicted RBP16.09■□□□□ 0.17
PABPC1-210ENST00000519363 NOP14P78316 857 aaKnown RBP16.09■□□□□ 0.17
PABPC1-210ENST00000519363 NFX1Q12986 1120 aaKnown RBP16.09■□□□□ 0.17
PABPC1-210ENST00000519363 MBTPS1Q14703 1052 aa16.09■□□□□ 0.17
PABPC1-210ENST00000519363 LRRC8DQ7L1W4 858 aa16.09■□□□□ 0.17
PABPC1-210ENST00000519363 PPM1KQ8N3J5 372 aa16.09■□□□□ 0.17
PABPC1-210ENST00000519363 KREMEN1Q96MU8 473 aa16.09■□□□□ 0.17
PABPC1-210ENST00000519363 CHP1Q99653 195 aa16.09■□□□□ 0.17
PABPC1-210ENST00000519363 UBE2TQ9NPD8 197 aaPredicted RBP16.09■□□□□ 0.17
PABPC1-210ENST00000519363 FAM105AQ9NUU6 356 aa16.09■□□□□ 0.17
PABPC1-210ENST00000519363 SPTLC3Q9NUV7 552 aa16.09■□□□□ 0.17
PABPC1-210ENST00000519363 ITGA11Q9UKX5 1188 aa16.09■□□□□ 0.17
PABPC1-210ENST00000519363 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.09■□□□□ 0.17
PABPC1-210ENST00000519363 ZNF623O75123 536 aa16.08■□□□□ 0.16
PABPC1-210ENST00000519363 NDUFA10O95299 355 aa16.08■□□□□ 0.16
PABPC1-210ENST00000519363 STAU1O95793 577 aaKnown RBP16.08■□□□□ 0.16
PABPC1-210ENST00000519363 TBXAS1P24557 533 aaPredicted RBP16.08■□□□□ 0.16
PABPC1-210ENST00000519363 TRPC3Q13507 836 aa16.08■□□□□ 0.16
PABPC1-210ENST00000519363 MTF1Q14872 753 aa16.08■□□□□ 0.16
PABPC1-210ENST00000519363 SGSM1Q2NKQ1 1148 aa16.08■□□□□ 0.16
PABPC1-210ENST00000519363 SLC39A5Q6ZMH5 540 aa16.08■□□□□ 0.16
PABPC1-210ENST00000519363 IRF2BP2Q7Z5L9 587 aa16.08■□□□□ 0.16
PABPC1-210ENST00000519363 MRPL10Q7Z7H8 261 aaKnown RBP16.08■□□□□ 0.16
PABPC1-210ENST00000519363 CCAR2Q8N163 923 aaKnown RBP16.08■□□□□ 0.16
PABPC1-210ENST00000519363 C1orf127Q8N9H9 656 aa16.08■□□□□ 0.16
PABPC1-210ENST00000519363 CXorf38Q8TB03 319 aa16.08■□□□□ 0.16
PABPC1-210ENST00000519363 VRTNQ9H8Y1 702 aa16.08■□□□□ 0.16
PABPC1-210ENST00000519363 NHEJ1Q9H9Q4 299 aaPredicted RBP16.08■□□□□ 0.16
PABPC1-210ENST00000519363 SIX4Q9UIU6 781 aa16.08■□□□□ 0.16
PABPC1-210ENST00000519363 HES2Q9Y543 173 aa16.08■□□□□ 0.16
PABPC1-210ENST00000519363 PCDHB2Q9Y5E7 798 aa16.08■□□□□ 0.16
PABPC1-210ENST00000519363 EPN1Q9Y6I3 576 aaPredicted RBP16.08■□□□□ 0.16
PABPC1-210ENST00000519363 EIF3CLB5ME19 914 aaKnown RBP16.07■□□□□ 0.16
PABPC1-210ENST00000519363 TULP1O00294 542 aaPredicted RBP16.07■□□□□ 0.16
PABPC1-210ENST00000519363 ZSCAN12O43309 604 aa16.07■□□□□ 0.16
PABPC1-210ENST00000519363 XPOTO43592 962 aaKnown RBP16.07■□□□□ 0.16
PABPC1-210ENST00000519363 EVI5O60447 810 aa16.07■□□□□ 0.16
PABPC1-210ENST00000519363 GFPT2O94808 682 aa16.07■□□□□ 0.16
PABPC1-210ENST00000519363 LCA5LO95447 670 aa16.07■□□□□ 0.16
PABPC1-210ENST00000519363 CCDC175P0C221 793 aa16.07■□□□□ 0.16
PABPC1-210ENST00000519363 SKIP12755 728 aa16.07■□□□□ 0.16
PABPC1-210ENST00000519363 ATICP31939 592 aa16.07■□□□□ 0.16
PABPC1-210ENST00000519363 KLHL30Q0D2K2 578 aa16.07■□□□□ 0.16
PABPC1-210ENST00000519363 CUL2Q13617 745 aa16.07■□□□□ 0.16
PABPC1-210ENST00000519363 ZBTB6Q15916 424 aa16.07■□□□□ 0.16
PABPC1-210ENST00000519363 ASTE1Q2TB18 679 aaPredicted RBP16.07■□□□□ 0.16
PABPC1-210ENST00000519363 TDRD12Q587J7 1177 aaKnown RBP16.07■□□□□ 0.16
PABPC1-210ENST00000519363 TOGARAM2Q6ZUX3 1019 aa16.07■□□□□ 0.16
PABPC1-210ENST00000519363 FAM71AQ8IYT1 594 aa16.07■□□□□ 0.16
PABPC1-210ENST00000519363 KIF12Q96FN5 646 aa16.07■□□□□ 0.16
PABPC1-210ENST00000519363 CCDC42Q96M95 316 aa16.07■□□□□ 0.16
PABPC1-210ENST00000519363 EIF3CQ99613 913 aaKnown RBP16.07■□□□□ 0.16
PABPC1-210ENST00000519363 PI4K2AQ9BTU6 479 aa16.07■□□□□ 0.16
PABPC1-210ENST00000519363 OSBPL7Q9BZF2 842 aa16.07■□□□□ 0.16
PABPC1-210ENST00000519363 NIF3L1Q9GZT8 377 aa16.07■□□□□ 0.16
PABPC1-210ENST00000519363 XYLT2Q9H1B5 865 aa16.07■□□□□ 0.16
PABPC1-210ENST00000519363 APOBEC3GQ9HC16 384 aaKnown RBP16.07■□□□□ 0.16
PABPC1-210ENST00000519363 UBQLN1Q9UMX0 589 aaKnown RBP16.07■□□□□ 0.16
PABPC1-210ENST00000519363 ADGRG1Q9Y653 693 aa16.07■□□□□ 0.16
PABPC1-210ENST00000519363 SCN1AP35498 2009 aa16.06■□□□□ 0.16
PABPC1-210ENST00000519363 TDRD15B5MCY1 1934 aaKnown RBP16.06■□□□□ 0.16
PABPC1-210ENST00000519363 A0A0U1RQF3 1178 aa16.06■□□□□ 0.16
PABPC1-210ENST00000519363 GOLGA6L9A6NEM1 432 aa16.06■□□□□ 0.16
PABPC1-210ENST00000519363 DCDC2CA8MYV0 355 aa16.06■□□□□ 0.16
PABPC1-210ENST00000519363 MGEA5O60502 916 aa16.06■□□□□ 0.16
PABPC1-210ENST00000519363 PQBP1O60828 265 aaKnown RBP16.06■□□□□ 0.16
PABPC1-210ENST00000519363 PARNO95453 639 aaKnown RBP16.06■□□□□ 0.16
PABPC1-210ENST00000519363 CYP3A5P20815 502 aa16.06■□□□□ 0.16
PABPC1-210ENST00000519363 EIF4A3P38919 411 aaKnown RBP16.06■□□□□ 0.16
PABPC1-210ENST00000519363 MYL6P60660 151 aa16.06■□□□□ 0.16
PABPC1-210ENST00000519363 ARHGAP44Q17R89 818 aa16.06■□□□□ 0.16
PABPC1-210ENST00000519363 ZNF699Q32M78 642 aa16.06■□□□□ 0.16
PABPC1-210ENST00000519363 BEST2Q8NFU1 509 aa16.06■□□□□ 0.16
PABPC1-210ENST00000519363 KAT5Q92993 513 aa16.06■□□□□ 0.16
PABPC1-210ENST00000519363 TATDN2Q93075 761 aa16.06■□□□□ 0.16
PABPC1-210ENST00000519363 ZMAT2Q96NC0 199 aaKnown RBP16.06■□□□□ 0.16
PABPC1-210ENST00000519363 FTHL17Q9BXU8 183 aa16.06■□□□□ 0.16
PABPC1-210ENST00000519363 PRDM10Q9NQV6 1147 aa16.06■□□□□ 0.16
PABPC1-210ENST00000519363 DPP3Q9NY33 737 aa16.06■□□□□ 0.16
PABPC1-210ENST00000519363 PPP2R2CQ9Y2T4 447 aa16.06■□□□□ 0.16
PABPC1-210ENST00000519363 GIT1Q9Y2X7 761 aa16.06■□□□□ 0.16
PABPC1-210ENST00000519363 NUB1Q9Y5A7 615 aa16.06■□□□□ 0.16
PABPC1-210ENST00000519363 SCN5AQ14524 2016 aa16.06■□□□□ 0.16
PABPC1-210ENST00000519363 RBAK-RBAKDNI3L0D1 243 aa16.05■□□□□ 0.16
PABPC1-210ENST00000519363 FOXN3O00409 490 aaPredicted RBP16.05■□□□□ 0.16
PABPC1-210ENST00000519363 IPO7O95373 1038 aaKnown RBP16.05■□□□□ 0.16
PABPC1-210ENST00000519363 CST3P01034 146 aaPredicted RBP16.05■□□□□ 0.16
PABPC1-210ENST00000519363 ITGB3P05106 788 aa16.05■□□□□ 0.16
PABPC1-210ENST00000519363 PLEKP08567 350 aaPredicted RBP16.05■□□□□ 0.16
PABPC1-210ENST00000519363 ITGA4P13612 1032 aa16.05■□□□□ 0.16
PABPC1-210ENST00000519363 AKAP5P24588 427 aa16.05■□□□□ 0.16
PABPC1-210ENST00000519363 KIF11P52732 1056 aa16.05■□□□□ 0.16
PABPC1-210ENST00000519363 RBP5P82980 135 aa16.05■□□□□ 0.16
PABPC1-210ENST00000519363 SPOPLQ6IQ16 392 aa16.05■□□□□ 0.16
PABPC1-210ENST00000519363 UBR7Q8N806 425 aa16.05■□□□□ 0.16
PABPC1-210ENST00000519363 DIS3LQ8TF46 1054 aaKnown RBP16.05■□□□□ 0.16
PABPC1-210ENST00000519363 SYT11Q9BT88 431 aa16.05■□□□□ 0.16
PABPC1-210ENST00000519363 APOL6Q9BWW8 343 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms