RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-210	ENST00000519362	SLC45A1	Q9Y2W3	748 aa		13.25	□□□□□ -0.29
SPIDR-210	ENST00000519362	PCDHA3	Q9Y5H8	950 aa		13.25	□□□□□ -0.29
SPIDR-210	ENST00000519362	UMODL1	Q5DID0	1318 aa		13.24	□□□□□ -0.29
SPIDR-210	ENST00000519362	CCDC66	A2RUB6	948 aa		13.24	□□□□□ -0.29
SPIDR-210	ENST00000519362	TMEM110-MUSTN1	A8MSY1	372 aa		13.24	□□□□□ -0.29
SPIDR-210	ENST00000519362	ACKR2	O00590	384 aa		13.24	□□□□□ -0.29
SPIDR-210	ENST00000519362	ASS1	P00966	412 aa	Known RBP	13.24	□□□□□ -0.29
SPIDR-210	ENST00000519362	MYBL1	P10243	752 aa		13.24	□□□□□ -0.29
SPIDR-210	ENST00000519362	SCARA3	Q6AZY7	606 aa		13.24	□□□□□ -0.29
SPIDR-210	ENST00000519362	MAMDC4	Q6UXC1	1216 aa		13.24	□□□□□ -0.29
SPIDR-210	ENST00000519362	ZBTB33	Q86T24	672 aa		13.24	□□□□□ -0.29
SPIDR-210	ENST00000519362	PNMA8A	Q86V59	439 aa	Predicted RBP	13.24	□□□□□ -0.29
SPIDR-210	ENST00000519362	IQCK	Q8N0W5	287 aa		13.24	□□□□□ -0.29
SPIDR-210	ENST00000519362	TCHP	Q9BT92	498 aa		13.24	□□□□□ -0.29
SPIDR-210	ENST00000519362	NFKBIZ	Q9BYH8	718 aa		13.24	□□□□□ -0.29
SPIDR-210	ENST00000519362	RNPEP	Q9H4A4	650 aa		13.24	□□□□□ -0.29
SPIDR-210	ENST00000519362	ERVK-5	Q9HDB9	667 aa		13.24	□□□□□ -0.29
SPIDR-210	ENST00000519362	ERAP1	Q9NZ08	941 aa		13.24	□□□□□ -0.29
SPIDR-210	ENST00000519362	GOLGA6L10	A0A0M3HER8	536 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	RBM47	A0AV96	593 aa	Known RBP	13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	ASAP2	O43150	1006 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	TTI1	O43156	1089 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	C22orf31	O95567	290 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	CST3	P01034	146 aa	Predicted RBP	13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	HSPA6	P17066	643 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	HSPA9	P38646	679 aa	Known RBP	13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	ZNF132	P52740	706 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	CCNA1	P78396	465 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	LAMC2	Q13753	1193 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	TFDP1	Q14186	410 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	SURF1	Q15526	300 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	NAA35	Q5VZE5	725 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	EFCAB12	Q6NXP0	572 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	AADACL2	Q6P093	401 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	MPZL3	Q6UWV2	235 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	TRIM72	Q6ZMU5	477 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	MON1B	Q7L1V2	547 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	CPNE8	Q86YQ8	564 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	ABRA	Q8N0Z2	381 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	CPA5	Q8WXQ8	436 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	TRIM11	Q96F44	468 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	FAM204A	Q9H8W3	233 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	PCDHB4	Q9Y5E5	795 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	PDHX	O00330	501 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	SPOP	O43791	374 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	HSF2BP	O75031	334 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	GJB1	P08034	283 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	PYGM	P11217	842 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	RRM1	P23921	792 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	YY1	P25490	414 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	ADORA2A	P29274	412 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	GUCY2F	P51841	1108 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	MBTD1	Q05BQ5	628 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	SMYD5	Q6GMV2	418 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	TMEM270	Q6UE05	265 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	DDX42	Q86XP3	938 aa	Known RBP eCLIP	13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	ZDHHC14	Q8IZN3	488 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	RBBP8NL	Q8NC74	664 aa	Predicted RBP	13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	PIK3R5	Q8WYR1	880 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	EMID1	Q96A84	441 aa	Predicted RBP	13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	CYFIP2	Q96F07	1278 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	NLRP4	Q96MN2	994 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	ZIM3	Q96PE6	472 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	CELF4	Q9BZC1	486 aa	Known RBP	13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	MTMR12	Q9C0I1	747 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	KATNBL1	Q9H079	304 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	VTA1	Q9NP79	307 aa		13.23	□□□□□ -0.29
SPIDR-210	ENST00000519362	MROH7	Q68CQ1	1323 aa		13.22	□□□□□ -0.29
SPIDR-210	ENST00000519362	PLXNA1	Q9UIW2	1896 aa		13.22	□□□□□ -0.29
SPIDR-210	ENST00000519362	BTBD19	C9JJ37	291 aa		13.22	□□□□□ -0.29
SPIDR-210	ENST00000519362	OPA1	O60313	960 aa		13.22	□□□□□ -0.29
SPIDR-210	ENST00000519362	LGALS2	P05162	132 aa		13.22	□□□□□ -0.29
SPIDR-210	ENST00000519362	CFH	P08603	1231 aa		13.22	□□□□□ -0.29
SPIDR-210	ENST00000519362	HOXC6	P09630	235 aa		13.22	□□□□□ -0.29
SPIDR-210	ENST00000519362	CETP	P11597	493 aa		13.22	□□□□□ -0.29
SPIDR-210	ENST00000519362	GNA15	P30679	374 aa		13.22	□□□□□ -0.29
SPIDR-210	ENST00000519362	NSF	P46459	744 aa	Known RBP	13.22	□□□□□ -0.29
SPIDR-210	ENST00000519362	CLCN3	P51790	818 aa		13.22	□□□□□ -0.29
SPIDR-210	ENST00000519362	NOMO3	P69849	1222 aa		13.22	□□□□□ -0.29
SPIDR-210	ENST00000519362	POU5F1B	Q06416	359 aa		13.22	□□□□□ -0.29
SPIDR-210	ENST00000519362	DHX34	Q14147	1143 aa	Known RBP	13.22	□□□□□ -0.29
SPIDR-210	ENST00000519362	DUOXA2	Q1HG44	320 aa		13.22	□□□□□ -0.29
SPIDR-210	ENST00000519362	ZNF484	Q5JVG2	852 aa		13.22	□□□□□ -0.29
SPIDR-210	ENST00000519362	ATF7IP2	Q5U623	682 aa		13.22	□□□□□ -0.29
SPIDR-210	ENST00000519362	ADAT2	Q7Z6V5	191 aa	Known RBP	13.22	□□□□□ -0.29
SPIDR-210	ENST00000519362	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.22	□□□□□ -0.29
SPIDR-210	ENST00000519362	LINC01465	Q8N7H1	131 aa		13.22	□□□□□ -0.29
SPIDR-210	ENST00000519362	PRELID2	Q8N945	189 aa		13.22	□□□□□ -0.29
SPIDR-210	ENST00000519362	ZBTB10	Q96DT7	871 aa		13.22	□□□□□ -0.29
SPIDR-210	ENST00000519362	VCPIP1	Q96JH7	1222 aa		13.22	□□□□□ -0.29
SPIDR-210	ENST00000519362	IMPG2	Q9BZV3	1241 aa		13.22	□□□□□ -0.29
SPIDR-210	ENST00000519362	NEUROG2	Q9H2A3	272 aa		13.22	□□□□□ -0.29
SPIDR-210	ENST00000519362	MINDY3	Q9H8M7	445 aa		13.22	□□□□□ -0.29
SPIDR-210	ENST00000519362	MORF4L1	Q9UBU8	362 aa		13.22	□□□□□ -0.29
SPIDR-210	ENST00000519362	ANAPC7	Q9UJX3	599 aa		13.22	□□□□□ -0.29
SPIDR-210	ENST00000519362	UTP11	Q9Y3A2	253 aa	Known RBP	13.22	□□□□□ -0.29
SPIDR-210	ENST00000519362	PLXNB2	O15031	1838 aa		13.22	□□□□□ -0.29
SPIDR-210	ENST00000519362	B4GALT5	O43286	388 aa		13.21	□□□□□ -0.29
SPIDR-210	ENST00000519362	DAPK3	O43293	454 aa		13.21	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms