RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 LDAHQ9H6V9 325 aa6.96□□□□□ -1.3
SQLE-203ENST00000518931 ISY1Q9ULR0 285 aaKnown RBP6.96□□□□□ -1.3
SQLE-203ENST00000518931 TESMINQ9Y4I5 508 aa6.96□□□□□ -1.3
SQLE-203ENST00000518931 FAM171A2A8MVW0 826 aa6.95□□□□□ -1.3
SQLE-203ENST00000518931 IPO13O94829 963 aaKnown RBP6.95□□□□□ -1.3
SQLE-203ENST00000518931 SRGNP10124 158 aa6.95□□□□□ -1.3
SQLE-203ENST00000518931 TRIM27P14373 513 aa6.95□□□□□ -1.3
SQLE-203ENST00000518931 WASP42768 502 aa6.95□□□□□ -1.3
SQLE-203ENST00000518931 PIN1Q13526 163 aaPredicted RBP6.95□□□□□ -1.3
SQLE-203ENST00000518931 PDXDC1Q6P996 788 aa6.95□□□□□ -1.3
SQLE-203ENST00000518931 MDGA1Q8NFP4 955 aa6.95□□□□□ -1.3
SQLE-203ENST00000518931 ATXN2LQ8WWM7 1075 aaKnown RBP6.95□□□□□ -1.3
SQLE-203ENST00000518931 COA7Q96BR5 231 aa6.95□□□□□ -1.3
SQLE-203ENST00000518931 HOOK2Q96ED9 719 aa6.95□□□□□ -1.3
SQLE-203ENST00000518931 CEP95Q96GE4 821 aa6.95□□□□□ -1.3
SQLE-203ENST00000518931 MYCBPQ99417 103 aaPredicted RBP6.95□□□□□ -1.3
SQLE-203ENST00000518931 PDCD2LQ9BRP1 358 aa6.95□□□□□ -1.3
SQLE-203ENST00000518931 LSM14BQ9BX40 385 aaKnown RBP6.95□□□□□ -1.3
SQLE-203ENST00000518931 ACAD8Q9UKU7 415 aa6.95□□□□□ -1.3
SQLE-203ENST00000518931 LIMCH1Q9UPQ0 1083 aa6.95□□□□□ -1.3
SQLE-203ENST00000518931 SIK3Q9Y2K2 1263 aa6.95□□□□□ -1.3
SQLE-203ENST00000518931 GIT1Q9Y2X7 761 aa6.95□□□□□ -1.3
SQLE-203ENST00000518931 TSC22D4Q9Y3Q8 395 aa6.95□□□□□ -1.3
SQLE-203ENST00000518931 WNT10BO00744 389 aa6.94□□□□□ -1.3
SQLE-203ENST00000518931 CYP27B1O15528 508 aa6.94□□□□□ -1.3
SQLE-203ENST00000518931 ORC4O43929 436 aa6.94□□□□□ -1.3
SQLE-203ENST00000518931 ADRB1P08588 477 aa6.94□□□□□ -1.3
SQLE-203ENST00000518931 HK1P19367 917 aa6.94□□□□□ -1.3
SQLE-203ENST00000518931 HALP42357 657 aa6.94□□□□□ -1.3
SQLE-203ENST00000518931 SLC6A9P48067 706 aa6.94□□□□□ -1.3
SQLE-203ENST00000518931 UAP1L1Q3KQV9 507 aa6.94□□□□□ -1.3
SQLE-203ENST00000518931 FAM47AQ5JRC9 791 aa6.94□□□□□ -1.3
SQLE-203ENST00000518931 SPDYAQ5MJ70 313 aa6.94□□□□□ -1.3
SQLE-203ENST00000518931 ANKS6Q68DC2 871 aa6.94□□□□□ -1.3
SQLE-203ENST00000518931 Q6ZRM9 215 aa6.94□□□□□ -1.3
SQLE-203ENST00000518931 MORC1Q86VD1 984 aa6.94□□□□□ -1.3
SQLE-203ENST00000518931 RHOT1Q8IXI2 618 aa6.94□□□□□ -1.3
SQLE-203ENST00000518931 CHCHD4Q8N4Q1 142 aa6.94□□□□□ -1.3
SQLE-203ENST00000518931 CPA6Q8N4T0 437 aa6.94□□□□□ -1.3
SQLE-203ENST00000518931 OTUD6BQ8N6M0 293 aa6.94□□□□□ -1.3
SQLE-203ENST00000518931 MAGEB6Q8N7X4 407 aa6.94□□□□□ -1.3
SQLE-203ENST00000518931 CCHCR1Q8TD31 782 aa6.94□□□□□ -1.3
SQLE-203ENST00000518931 SENP6Q9GZR1 1112 aaPredicted RBP6.94□□□□□ -1.3
SQLE-203ENST00000518931 IP6K2Q9UHH9 426 aa6.94□□□□□ -1.3
SQLE-203ENST00000518931 PCDHA13Q9Y5I0 950 aa6.94□□□□□ -1.3
SQLE-203ENST00000518931 CCDC154A6NI56 674 aa6.93□□□□□ -1.3
SQLE-203ENST00000518931 PLSCR1O15162 318 aa6.93□□□□□ -1.3
SQLE-203ENST00000518931 HTRA2O43464 458 aaPredicted RBP6.93□□□□□ -1.3
SQLE-203ENST00000518931 HMMRO75330 724 aa6.93□□□□□ -1.3
SQLE-203ENST00000518931 U2AF1L5P0DN76 240 aaPredicted RBP6.93□□□□□ -1.3
SQLE-203ENST00000518931 EDNRBP24530 442 aa6.93□□□□□ -1.3
SQLE-203ENST00000518931 SCNN1GP51170 649 aa6.93□□□□□ -1.3
SQLE-203ENST00000518931 ADKP55263 362 aaKnown RBP6.93□□□□□ -1.3
SQLE-203ENST00000518931 U2AF1Q01081 240 aaKnown RBP eCLIP6.93□□□□□ -1.3
SQLE-203ENST00000518931 CRHR2Q13324 411 aa6.93□□□□□ -1.3
SQLE-203ENST00000518931 RRP1BQ14684 758 aaKnown RBP6.93□□□□□ -1.3
SQLE-203ENST00000518931 ZNF572Q7Z3I7 529 aaPredicted RBP6.93□□□□□ -1.3
SQLE-203ENST00000518931 MIER2Q8N344 545 aa6.93□□□□□ -1.3
SQLE-203ENST00000518931 VPS37AQ8NEZ2 397 aa6.93□□□□□ -1.3
SQLE-203ENST00000518931 EXTL1Q92935 676 aa6.93□□□□□ -1.3
SQLE-203ENST00000518931 PGBD4Q96DM1 585 aa6.93□□□□□ -1.3
SQLE-203ENST00000518931 MNTQ99583 582 aa6.93□□□□□ -1.3
SQLE-203ENST00000518931 GPR87Q9BY21 358 aa6.93□□□□□ -1.3
SQLE-203ENST00000518931 SPON1Q9HCB6 807 aa6.93□□□□□ -1.3
SQLE-203ENST00000518931 PRDM11Q9NQV5 511 aa6.93□□□□□ -1.3
SQLE-203ENST00000518931 LANCL2Q9NS86 450 aa6.93□□□□□ -1.3
SQLE-203ENST00000518931 C9orf78Q9NZ63 289 aaPredicted RBP6.93□□□□□ -1.3
SQLE-203ENST00000518931 SERPINB13Q9UIV8 391 aa6.93□□□□□ -1.3
SQLE-203ENST00000518931 AJAP1Q9UKB5 411 aaPredicted RBP6.93□□□□□ -1.3
SQLE-203ENST00000518931 IPPQ9Y573 584 aa6.93□□□□□ -1.3
SQLE-203ENST00000518931 FAM170AA1A519 330 aa6.92□□□□□ -1.3
SQLE-203ENST00000518931 TBKBP1A7MCY6 615 aa6.92□□□□□ -1.3
SQLE-203ENST00000518931 IL2RBP14784 551 aa6.92□□□□□ -1.3
SQLE-203ENST00000518931 FLT3LGP49771 235 aa6.92□□□□□ -1.3
SQLE-203ENST00000518931 RABGGTBP53611 331 aa6.92□□□□□ -1.3
SQLE-203ENST00000518931 DDX10Q13206 875 aaKnown RBP6.92□□□□□ -1.3
SQLE-203ENST00000518931 BIRC3Q13489 604 aa6.92□□□□□ -1.3
SQLE-203ENST00000518931 IL10RAQ13651 578 aa6.92□□□□□ -1.3
SQLE-203ENST00000518931 TOMM20Q15388 145 aa6.92□□□□□ -1.3
SQLE-203ENST00000518931 TAF11Q15544 211 aa6.92□□□□□ -1.3
SQLE-203ENST00000518931 USP39Q53GS9 565 aaKnown RBP6.92□□□□□ -1.3
SQLE-203ENST00000518931 IL31Q6EBC2 164 aa6.92□□□□□ -1.3
SQLE-203ENST00000518931 PPP4R3AQ6IN85 833 aa6.92□□□□□ -1.3
SQLE-203ENST00000518931 MIGA2Q7L4E1 593 aa6.92□□□□□ -1.3
SQLE-203ENST00000518931 DOK3Q7L591 496 aa6.92□□□□□ -1.3
SQLE-203ENST00000518931 CMTR2Q8IYT2 770 aaKnown RBP6.92□□□□□ -1.3
SQLE-203ENST00000518931 SLC35B2Q8TB61 432 aa6.92□□□□□ -1.3
SQLE-203ENST00000518931 SH3RF3Q8TEJ3 882 aaPredicted RBP6.92□□□□□ -1.3
SQLE-203ENST00000518931 GOLGA1Q92805 767 aa6.92□□□□□ -1.3
SQLE-203ENST00000518931 HDAC10Q969S8 669 aa6.92□□□□□ -1.3
SQLE-203ENST00000518931 CYFIP2Q96F07 1278 aa6.92□□□□□ -1.3
SQLE-203ENST00000518931 CDK5RAP3Q96JB5 506 aa6.92□□□□□ -1.3
SQLE-203ENST00000518931 ELAC2Q9BQ52 826 aaKnown RBP6.92□□□□□ -1.3
SQLE-203ENST00000518931 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.92□□□□□ -1.3
SQLE-203ENST00000518931 KCNH6Q9H252 994 aa6.92□□□□□ -1.3
SQLE-203ENST00000518931 MANSC1Q9H8J5 431 aa6.92□□□□□ -1.3
SQLE-203ENST00000518931 TMEM140Q9NV12 185 aa6.92□□□□□ -1.3
SQLE-203ENST00000518931 ODF2LQ9ULJ1 636 aa6.92□□□□□ -1.3
SQLE-203ENST00000518931 SLC45A1Q9Y2W3 748 aa6.92□□□□□ -1.3
SQLE-203ENST00000518931 XDHP47989 1333 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms