RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 ACKR2O00590 384 aa13.6□□□□□ -0.23
TRAPPC9-204ENST00000518723 PRKCBP05771 671 aa13.6□□□□□ -0.23
TRAPPC9-204ENST00000518723 COL4A2P08572 1712 aa13.6□□□□□ -0.23
TRAPPC9-204ENST00000518723 CHRNB1P11230 501 aa13.6□□□□□ -0.23
TRAPPC9-204ENST00000518723 ATF2P15336 505 aa13.6□□□□□ -0.23
TRAPPC9-204ENST00000518723 PSMC3P17980 439 aa13.6□□□□□ -0.23
TRAPPC9-204ENST00000518723 ELF1P32519 619 aa13.6□□□□□ -0.23
TRAPPC9-204ENST00000518723 CCR2P41597 374 aa13.6□□□□□ -0.23
TRAPPC9-204ENST00000518723 CXCL12P48061 93 aa13.6□□□□□ -0.23
TRAPPC9-204ENST00000518723 SATB1Q01826 763 aa13.6□□□□□ -0.23
TRAPPC9-204ENST00000518723 STK3Q13188 491 aa13.6□□□□□ -0.23
TRAPPC9-204ENST00000518723 SIM2Q14190 667 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC9-204ENST00000518723 DCAF4L1Q3SXM0 396 aa13.6□□□□□ -0.23
TRAPPC9-204ENST00000518723 VITQ6UXI7 678 aa13.6□□□□□ -0.23
TRAPPC9-204ENST00000518723 SPEM1Q8N4L4 309 aa13.6□□□□□ -0.23
TRAPPC9-204ENST00000518723 C3orf58Q8NDZ4 430 aa13.6□□□□□ -0.23
TRAPPC9-204ENST00000518723 SMARCD2Q92925 531 aa13.6□□□□□ -0.23
TRAPPC9-204ENST00000518723 MSANTD3Q96H12 275 aa13.6□□□□□ -0.23
TRAPPC9-204ENST00000518723 CHAMP1Q96JM3 812 aa13.6□□□□□ -0.23
TRAPPC9-204ENST00000518723 CORO1BQ9BR76 489 aa13.6□□□□□ -0.23
TRAPPC9-204ENST00000518723 TTC12Q9H892 705 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC9-204ENST00000518723 TRPV4Q9HBA0 871 aa13.6□□□□□ -0.23
TRAPPC9-204ENST00000518723 FAM208BQ5VWN6 2430 aa13.59□□□□□ -0.23
TRAPPC9-204ENST00000518723 FAM205CA6NFA0 338 aa13.59□□□□□ -0.23
TRAPPC9-204ENST00000518723 NRG2O14511 850 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC9-204ENST00000518723 PRRG1O14668 218 aa13.59□□□□□ -0.23
TRAPPC9-204ENST00000518723 EPB41L2O43491 1005 aaKnown RBP13.59□□□□□ -0.23
TRAPPC9-204ENST00000518723 HRO43593 1189 aa13.59□□□□□ -0.23
TRAPPC9-204ENST00000518723 REC8O95072 547 aa13.59□□□□□ -0.23
TRAPPC9-204ENST00000518723 GDI1P31150 447 aa13.59□□□□□ -0.23
TRAPPC9-204ENST00000518723 GAS6Q14393 721 aa13.59□□□□□ -0.23
TRAPPC9-204ENST00000518723 CALCRLQ16602 461 aa13.59□□□□□ -0.23
TRAPPC9-204ENST00000518723 TMEM132AQ24JP5 1023 aa13.59□□□□□ -0.23
TRAPPC9-204ENST00000518723 GLRA4Q5JXX5 417 aa13.59□□□□□ -0.23
TRAPPC9-204ENST00000518723 EEF1DP3Q658K8 133 aa13.59□□□□□ -0.23
TRAPPC9-204ENST00000518723 C1orf228Q6PIY5 440 aa13.59□□□□□ -0.23
TRAPPC9-204ENST00000518723 PDZD4Q76G19 769 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC9-204ENST00000518723 MAEAQ7L5Y9 396 aa13.59□□□□□ -0.23
TRAPPC9-204ENST00000518723 BSNDQ8WZ55 320 aa13.59□□□□□ -0.23
TRAPPC9-204ENST00000518723 TNFRSF25Q93038 417 aa13.59□□□□□ -0.23
TRAPPC9-204ENST00000518723 LARP6Q9BRS8 491 aaKnown RBP13.59□□□□□ -0.23
TRAPPC9-204ENST00000518723 TM6SF1Q9BZW5 370 aa13.59□□□□□ -0.23
TRAPPC9-204ENST00000518723 GJB4Q9NTQ9 266 aa13.59□□□□□ -0.23
TRAPPC9-204ENST00000518723 GDAQ9Y2T3 454 aa13.59□□□□□ -0.23
TRAPPC9-204ENST00000518723 INSL5Q9Y5Q6 135 aa13.59□□□□□ -0.23
TRAPPC9-204ENST00000518723 ATRXP46100 2492 aa13.59□□□□□ -0.23
TRAPPC9-204ENST00000518723 A0A087WWV3 80 aa13.58□□□□□ -0.24
TRAPPC9-204ENST00000518723 I3L4J1 428 aa13.58□□□□□ -0.24
TRAPPC9-204ENST00000518723 ARNTLO00327 626 aa13.58□□□□□ -0.24
TRAPPC9-204ENST00000518723 SYN3O14994 580 aa13.58□□□□□ -0.24
TRAPPC9-204ENST00000518723 GDF9O60383 454 aa13.58□□□□□ -0.24
TRAPPC9-204ENST00000518723 EDN1P05305 212 aa13.58□□□□□ -0.24
TRAPPC9-204ENST00000518723 SPATA31C1P0DKV0 1188 aa13.58□□□□□ -0.24
TRAPPC9-204ENST00000518723 ATP2B1P20020 1258 aa13.58□□□□□ -0.24
TRAPPC9-204ENST00000518723 NAMPTP43490 491 aa13.58□□□□□ -0.24
TRAPPC9-204ENST00000518723 BRCC3P46736 316 aa13.58□□□□□ -0.24
TRAPPC9-204ENST00000518723 EPHA5P54756 1037 aa13.58□□□□□ -0.24
TRAPPC9-204ENST00000518723 SCRN1Q12765 414 aa13.58□□□□□ -0.24
TRAPPC9-204ENST00000518723 PTGDRQ13258 359 aa13.58□□□□□ -0.24
TRAPPC9-204ENST00000518723 NR5A1Q13285 461 aa13.58□□□□□ -0.24
TRAPPC9-204ENST00000518723 MRPL58Q14197 206 aaKnown RBP13.58□□□□□ -0.24
TRAPPC9-204ENST00000518723 CYP4A22Q5TCH4 519 aa13.58□□□□□ -0.24
TRAPPC9-204ENST00000518723 TPGS2Q68CL5 300 aa13.58□□□□□ -0.24
TRAPPC9-204ENST00000518723 CENPQQ7L2Z9 268 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC9-204ENST00000518723 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC9-204ENST00000518723 LONP2Q86WA8 852 aa13.58□□□□□ -0.24
TRAPPC9-204ENST00000518723 MFSD6LQ8IWD5 586 aa13.58□□□□□ -0.24
TRAPPC9-204ENST00000518723 LEMD2Q8NC56 503 aa13.58□□□□□ -0.24
TRAPPC9-204ENST00000518723 ZSWIM3Q96MP5 696 aa13.58□□□□□ -0.24
TRAPPC9-204ENST00000518723 MTMR9Q96QG7 549 aa13.58□□□□□ -0.24
TRAPPC9-204ENST00000518723 CYP4F11Q9HBI6 524 aa13.58□□□□□ -0.24
TRAPPC9-204ENST00000518723 GOLGA2P5Q9HBQ8 144 aa13.58□□□□□ -0.24
TRAPPC9-204ENST00000518723 TUFT1Q9NNX1 390 aa13.58□□□□□ -0.24
TRAPPC9-204ENST00000518723 ANGPTL2Q9UKU9 493 aa13.58□□□□□ -0.24
TRAPPC9-204ENST00000518723 MAFFQ9ULX9 164 aa13.58□□□□□ -0.24
TRAPPC9-204ENST00000518723 USP20Q9Y2K6 914 aa13.58□□□□□ -0.24
TRAPPC9-204ENST00000518723 SMIM28A0A1B0GU29 152 aa13.57□□□□□ -0.24
TRAPPC9-204ENST00000518723 CHURC1-FNTBB4DL54 471 aa13.57□□□□□ -0.24
TRAPPC9-204ENST00000518723 H7C4K7 107 aa13.57□□□□□ -0.24
TRAPPC9-204ENST00000518723 K7ESF4 209 aa13.57□□□□□ -0.24
TRAPPC9-204ENST00000518723 ZNF263O14978 683 aa13.57□□□□□ -0.24
TRAPPC9-204ENST00000518723 NEMFO60524 1076 aa13.57□□□□□ -0.24
TRAPPC9-204ENST00000518723 MOSPD3O75425 235 aa13.57□□□□□ -0.24
TRAPPC9-204ENST00000518723 SEC24AO95486 1093 aa13.57□□□□□ -0.24
TRAPPC9-204ENST00000518723 CCNE1P24864 410 aa13.57□□□□□ -0.24
TRAPPC9-204ENST00000518723 PMLP29590 882 aa13.57□□□□□ -0.24
TRAPPC9-204ENST00000518723 HOXA6P31267 233 aa13.57□□□□□ -0.24
TRAPPC9-204ENST00000518723 KRT2P35908 639 aa13.57□□□□□ -0.24
TRAPPC9-204ENST00000518723 TXKP42681 527 aa13.57□□□□□ -0.24
TRAPPC9-204ENST00000518723 FNTBP49356 437 aa13.57□□□□□ -0.24
TRAPPC9-204ENST00000518723 EFNA5P52803 228 aa13.57□□□□□ -0.24
TRAPPC9-204ENST00000518723 LIMK1P53667 647 aa13.57□□□□□ -0.24
TRAPPC9-204ENST00000518723 SHC2P98077 582 aa13.57□□□□□ -0.24
TRAPPC9-204ENST00000518723 DMWDQ09019 674 aa13.57□□□□□ -0.24
TRAPPC9-204ENST00000518723 LRRC32Q14392 662 aa13.57□□□□□ -0.24
TRAPPC9-204ENST00000518723 XKR4Q5GH76 650 aa13.57□□□□□ -0.24
TRAPPC9-204ENST00000518723 IQCEQ6IPM2 695 aa13.57□□□□□ -0.24
TRAPPC9-204ENST00000518723 APBB1IPQ7Z5R6 666 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC9-204ENST00000518723 ELMOD1Q8N336 334 aa13.57□□□□□ -0.24
TRAPPC9-204ENST00000518723 DEPTORQ8TB45 409 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms