RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 XKR4Q5GH76 650 aa11.41□□□□□ -0.58
PABPC1-203ENST00000517921 E4F1Q66K89 784 aaPredicted RBP11.41□□□□□ -0.58
PABPC1-203ENST00000517921 SCARA3Q6AZY7 606 aa11.41□□□□□ -0.58
PABPC1-203ENST00000517921 PHLDB3Q6NSJ2 640 aa11.41□□□□□ -0.58
PABPC1-203ENST00000517921 TRAPPC11Q7Z392 1133 aa11.41□□□□□ -0.58
PABPC1-203ENST00000517921 CACNA2D4Q7Z3S7 1137 aa11.41□□□□□ -0.58
PABPC1-203ENST00000517921 MRPL10Q7Z7H8 261 aaKnown RBP11.41□□□□□ -0.58
PABPC1-203ENST00000517921 NT5DC4Q86YG4 428 aa11.41□□□□□ -0.58
PABPC1-203ENST00000517921 ARHGEF19Q8IW93 802 aa11.41□□□□□ -0.58
PABPC1-203ENST00000517921 TMEM130Q8N3G9 435 aa11.41□□□□□ -0.58
PABPC1-203ENST00000517921 C1orf127Q8N9H9 656 aa11.41□□□□□ -0.58
PABPC1-203ENST00000517921 CCDC112Q8NEF3 446 aa11.41□□□□□ -0.58
PABPC1-203ENST00000517921 OR8K1Q8NGG5 319 aa11.41□□□□□ -0.58
PABPC1-203ENST00000517921 KIF12Q96FN5 646 aa11.41□□□□□ -0.58
PABPC1-203ENST00000517921 ZMAT2Q96NC0 199 aaKnown RBP11.41□□□□□ -0.58
PABPC1-203ENST00000517921 NT5C1BQ96P26 610 aa11.41□□□□□ -0.58
PABPC1-203ENST00000517921 ADAM2Q99965 735 aa11.41□□□□□ -0.58
PABPC1-203ENST00000517921 PI4K2AQ9BTU6 479 aa11.41□□□□□ -0.58
PABPC1-203ENST00000517921 SIX4Q9UIU6 781 aa11.41□□□□□ -0.58
PABPC1-203ENST00000517921 ZMYND8Q9ULU4 1186 aaPredicted RBP11.41□□□□□ -0.58
PABPC1-203ENST00000517921 DERAQ9Y315 318 aa11.41□□□□□ -0.58
PABPC1-203ENST00000517921 A0A0U1RQF3 1178 aa11.4□□□□□ -0.58
PABPC1-203ENST00000517921 LRRC53A6NM62 1247 aa11.4□□□□□ -0.58
PABPC1-203ENST00000517921 ZC3H11AO75152 810 aaKnown RBP eCLIP11.4□□□□□ -0.58
PABPC1-203ENST00000517921 PHACTR2O75167 634 aa11.4□□□□□ -0.58
PABPC1-203ENST00000517921 CLTBP09497 229 aa11.4□□□□□ -0.58
PABPC1-203ENST00000517921 KCNE1P15382 129 aa11.4□□□□□ -0.58
PABPC1-203ENST00000517921 HNRNPH3P31942 346 aaKnown RBP11.4□□□□□ -0.58
PABPC1-203ENST00000517921 GUCY2FP51841 1108 aa11.4□□□□□ -0.58
PABPC1-203ENST00000517921 ZBTB6Q15916 424 aa11.4□□□□□ -0.58
PABPC1-203ENST00000517921 MEA1Q16626 185 aa11.4□□□□□ -0.58
PABPC1-203ENST00000517921 GLRA4Q5JXX5 417 aa11.4□□□□□ -0.58
PABPC1-203ENST00000517921 AGMOQ6ZNB7 445 aa11.4□□□□□ -0.58
PABPC1-203ENST00000517921 RRAGAQ7L523 313 aa11.4□□□□□ -0.58
PABPC1-203ENST00000517921 HACE1Q8IYU2 909 aa11.4□□□□□ -0.58
PABPC1-203ENST00000517921 ZNF397Q8NF99 534 aaPredicted RBP11.4□□□□□ -0.58
PABPC1-203ENST00000517921 CXorf38Q8TB03 319 aa11.4□□□□□ -0.58
PABPC1-203ENST00000517921 HELQQ8TDG4 1101 aa11.4□□□□□ -0.58
PABPC1-203ENST00000517921 ELMO3Q96BJ8 720 aa11.4□□□□□ -0.58
PABPC1-203ENST00000517921 SCLYQ96I15 445 aa11.4□□□□□ -0.58
PABPC1-203ENST00000517921 KREMEN1Q96MU8 473 aa11.4□□□□□ -0.58
PABPC1-203ENST00000517921 PPP1R12CQ9BZL4 782 aa11.4□□□□□ -0.58
PABPC1-203ENST00000517921 GPR88Q9GZN0 384 aa11.4□□□□□ -0.58
PABPC1-203ENST00000517921 APOBEC3GQ9HC16 384 aaKnown RBP11.4□□□□□ -0.58
PABPC1-203ENST00000517921 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.4□□□□□ -0.58
PABPC1-203ENST00000517921 KLK14Q9P0G3 267 aa11.4□□□□□ -0.58
PABPC1-203ENST00000517921 PARP2Q9UGN5 583 aa11.4□□□□□ -0.58
PABPC1-203ENST00000517921 DNAJC12Q9UKB3 198 aa11.4□□□□□ -0.58
PABPC1-203ENST00000517921 MYO6Q9UM54 1294 aa11.4□□□□□ -0.58
PABPC1-203ENST00000517921 VWA8A3KMH1 1905 aa11.4□□□□□ -0.58
PABPC1-203ENST00000517921 TRIOBPQ9H2D6 2365 aa11.39□□□□□ -0.59
PABPC1-203ENST00000517921 C9IYK1 514 aa11.39□□□□□ -0.59
PABPC1-203ENST00000517921 PTGESO14684 152 aa11.39□□□□□ -0.59
PABPC1-203ENST00000517921 PARNO95453 639 aaKnown RBP11.39□□□□□ -0.59
PABPC1-203ENST00000517921 ASS1P00966 412 aaKnown RBP11.39□□□□□ -0.59
PABPC1-203ENST00000517921 CST3P01034 146 aaPredicted RBP11.39□□□□□ -0.59
PABPC1-203ENST00000517921 CXCL10P02778 98 aa11.39□□□□□ -0.59
PABPC1-203ENST00000517921 SKIP12755 728 aa11.39□□□□□ -0.59
PABPC1-203ENST00000517921 ITGA4P13612 1032 aa11.39□□□□□ -0.59
PABPC1-203ENST00000517921 SYN1P17600 705 aa11.39□□□□□ -0.59
PABPC1-203ENST00000517921 CYP2C18P33260 490 aa11.39□□□□□ -0.59
PABPC1-203ENST00000517921 CCL23P55773 120 aa11.39□□□□□ -0.59
PABPC1-203ENST00000517921 NOP14P78316 857 aaKnown RBP11.39□□□□□ -0.59
PABPC1-203ENST00000517921 RAPGEF1Q13905 1077 aa11.39□□□□□ -0.59
PABPC1-203ENST00000517921 TCTN1Q2MV58 587 aa11.39□□□□□ -0.59
PABPC1-203ENST00000517921 SPOPLQ6IQ16 392 aa11.39□□□□□ -0.59
PABPC1-203ENST00000517921 WDR59Q6PJI9 974 aa11.39□□□□□ -0.59
PABPC1-203ENST00000517921 ZNF598Q86UK7 904 aaKnown RBP11.39□□□□□ -0.59
PABPC1-203ENST00000517921 RTN4RL1Q86UN2 441 aaPredicted RBP11.39□□□□□ -0.59
PABPC1-203ENST00000517921 ECHDC2Q86YB7 292 aa11.39□□□□□ -0.59
PABPC1-203ENST00000517921 DBF4BQ8NFT6 615 aa11.39□□□□□ -0.59
PABPC1-203ENST00000517921 APBB2Q92870 758 aa11.39□□□□□ -0.59
PABPC1-203ENST00000517921 KAT5Q92993 513 aa11.39□□□□□ -0.59
PABPC1-203ENST00000517921 LPPQ93052 612 aa11.39□□□□□ -0.59
PABPC1-203ENST00000517921 TATDN2Q93075 761 aa11.39□□□□□ -0.59
PABPC1-203ENST00000517921 C18orf25Q96B23 403 aaPredicted RBP11.39□□□□□ -0.59
PABPC1-203ENST00000517921 TSPAN18Q96SJ8 248 aa11.39□□□□□ -0.59
PABPC1-203ENST00000517921 BAG1Q99933 345 aaPredicted RBP11.39□□□□□ -0.59
PABPC1-203ENST00000517921 FTHL17Q9BXU8 183 aa11.39□□□□□ -0.59
PABPC1-203ENST00000517921 TSPYL2Q9H2G4 693 aaPredicted RBP11.39□□□□□ -0.59
PABPC1-203ENST00000517921 UBE2TQ9NPD8 197 aaPredicted RBP11.39□□□□□ -0.59
PABPC1-203ENST00000517921 RGS18Q9NS28 235 aa11.39□□□□□ -0.59
PABPC1-203ENST00000517921 C1orf112Q9NSG2 853 aa11.39□□□□□ -0.59
PABPC1-203ENST00000517921 TMEM39AQ9NV64 488 aa11.39□□□□□ -0.59
PABPC1-203ENST00000517921 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.39□□□□□ -0.59
PABPC1-203ENST00000517921 TUBGCP4Q9UGJ1 667 aa11.39□□□□□ -0.59
PABPC1-203ENST00000517921 PYCARDQ9ULZ3 195 aa11.39□□□□□ -0.59
PABPC1-203ENST00000517921 PLAGL2Q9UPG8 496 aa11.39□□□□□ -0.59
PABPC1-203ENST00000517921 GIT1Q9Y2X7 761 aa11.39□□□□□ -0.59
PABPC1-203ENST00000517921 COL4A6Q14031 1691 aa11.39□□□□□ -0.59
PABPC1-203ENST00000517921 SMIM28A0A1B0GU29 152 aa11.38□□□□□ -0.59
PABPC1-203ENST00000517921 F8VZ95 297 aa11.38□□□□□ -0.59
PABPC1-203ENST00000517921 ITGB3P05106 788 aa11.38□□□□□ -0.59
PABPC1-203ENST00000517921 PNMA6AP0CW24 399 aaPredicted RBP11.38□□□□□ -0.59
PABPC1-203ENST00000517921 SKILP12757 684 aa11.38□□□□□ -0.59
PABPC1-203ENST00000517921 POLR2BP30876 1174 aaKnown RBP11.38□□□□□ -0.59
PABPC1-203ENST00000517921 MLH1P40692 756 aa11.38□□□□□ -0.59
PABPC1-203ENST00000517921 MYL6P60660 151 aa11.38□□□□□ -0.59
PABPC1-203ENST00000517921 GCNT1Q02742 428 aa11.38□□□□□ -0.59
PABPC1-203ENST00000517921 TRPC3Q13507 836 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms