RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 PGBD4Q96DM1 585 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 KLHDC7BQ96G42 594 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 ZNF333Q96JL9 665 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 ZSCAN31Q96LW9 406 aaPredicted RBP3.09□□□□□ -1.91
SKP1-204ENST00000517691 TBC1D32Q96NH3 1257 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 DEFB118Q96PH6 123 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 TAAR1Q96RJ0 339 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 KIF2CQ99661 725 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 AGXT2Q9BYV1 514 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.09□□□□□ -1.91
SKP1-204ENST00000517691 ANLNQ9NQW6 1124 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 FAM184BQ9ULE4 1060 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 PCDHA4Q9UN74 947 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 DMTF1Q9Y222 760 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 LUC7L2Q9Y383 392 aaKnown RBP3.09□□□□□ -1.91
SKP1-204ENST00000517691 RPTORQ8N122 1335 aa3.09□□□□□ -1.91
SKP1-204ENST00000517691 DNAJC25-GNG10A0A024R161 153 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 ANO9A1A5B4 782 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 F5H423 210 aaPredicted RBP3.09□□□□□ -1.92
SKP1-204ENST00000517691 M0R082 166 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 STXBP3O00186 592 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 FSCN2O14926 492 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 RFPL3O75679 317 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 DEXIO95424 95 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 LARGE1O95461 756 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 SNAI1O95863 264 aaPredicted RBP3.09□□□□□ -1.92
SKP1-204ENST00000517691 DLGAP3O95886 979 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 XBP1P17861 261 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 EN2P19622 333 aaPredicted RBP3.09□□□□□ -1.92
SKP1-204ENST00000517691 ID4P47928 161 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 ALDH5A1P51649 535 aaPredicted RBP3.09□□□□□ -1.92
SKP1-204ENST00000517691 HSD17B4P51659 736 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 ACVR2BQ13705 512 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 POU4F3Q15319 338 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 STXBP2Q15833 593 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 PTPN21Q16825 1174 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 PFKFB3Q16875 520 aaPredicted RBP3.09□□□□□ -1.92
SKP1-204ENST00000517691 MZT2AQ6P582 158 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 IGF2-ASQ6U949 168 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 SEPT14Q6ZU15 432 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 ARMCX2Q7L311 632 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 CYFIP1Q7L576 1253 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 FBXO16Q8IX29 292 aaPredicted RBP3.09□□□□□ -1.92
SKP1-204ENST00000517691 OR8H2Q8N162 312 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 MSL3Q8N5Y2 521 aaKnown RBP3.09□□□□□ -1.92
SKP1-204ENST00000517691 FAM133AQ8N9E0 248 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 TRPV1Q8NER1 839 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 ST13P5Q8NFI4 369 aaPredicted RBP3.09□□□□□ -1.92
SKP1-204ENST00000517691 DNERQ8NFT8 737 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 ZNF417Q8TAU3 575 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 U2AF1L4Q8WU68 220 aaKnown RBP3.09□□□□□ -1.92
SKP1-204ENST00000517691 CCDC12Q8WUD4 166 aaPredicted RBP3.09□□□□□ -1.92
SKP1-204ENST00000517691 POF1BQ8WVV4 589 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 TMEM40Q8WWA1 233 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 WASF1Q92558 559 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 WNT8BQ93098 351 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 GTF3C6Q969F1 213 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 EXOC2Q96KP1 924 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 LRGUKQ96M69 825 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 ZNF587Q96SQ5 575 aaPredicted RBP3.09□□□□□ -1.92
SKP1-204ENST00000517691 IWS1Q96ST2 819 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 SSBP4Q9BWG4 385 aaPredicted RBP3.09□□□□□ -1.92
SKP1-204ENST00000517691 SPATA9Q9BWV2 254 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 RNF26Q9BY78 433 aaPredicted RBP3.09□□□□□ -1.92
SKP1-204ENST00000517691 C6orf50Q9HD87 102 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 JPH1Q9HDC5 661 aaPredicted RBP3.09□□□□□ -1.92
SKP1-204ENST00000517691 RIC8AQ9NPQ8 531 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 PXMP2Q9NR77 195 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 KRT82Q9NSB4 513 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 BARHL2Q9NY43 387 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 RTEL1Q9NZ71 1219 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 VPS54Q9P1Q0 977 aa3.09□□□□□ -1.92
SKP1-204ENST00000517691 ORC3Q9UBD5 711 aaPredicted RBP3.09□□□□□ -1.92
SKP1-204ENST00000517691 SYNGAP1Q96PV0 1343 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 GREB1LQ9C091 1923 aaPredicted RBP3.08□□□□□ -1.92
SKP1-204ENST00000517691 CASP8AP2Q9UKL3 1982 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 LAMA4Q16363 1823 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 ABHD14A-ACY1A0A1B0GW23 586 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 MEIS2O14770 477 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 SEPT4O43236 478 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 DYNC1LI2O43237 492 aaPredicted RBP3.08□□□□□ -1.92
SKP1-204ENST00000517691 JAK2O60674 1132 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 MSCO60682 206 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 MTA2O94776 668 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 SGPL1O95470 568 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 CTDNEP1O95476 244 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 CYP11A1P05108 521 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 GJB1P08034 283 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 RARBP10826 455 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 CYBAP13498 195 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 AKR1A1P14550 325 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 GNA11P29992 359 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 CCND2P30279 289 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 ADCYAP1R1P41586 468 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 MCM2P49736 904 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 TMPRSS15P98073 1019 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 TNFAIP2Q03169 654 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 RING1Q06587 406 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 TRIM29Q14134 588 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 TRIM14Q14142 442 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms