RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 FPR1P21462 350 aa4.04□□□□□ -1.76
RNU4-49P-201ENST00000516080 SLC6A2P23975 617 aa4.04□□□□□ -1.76
RNU4-49P-201ENST00000516080 PCSK1P29120 753 aa4.04□□□□□ -1.76
RNU4-49P-201ENST00000516080 SLC6A9P48067 706 aa4.04□□□□□ -1.76
RNU4-49P-201ENST00000516080 RARRES1P49788 294 aa4.04□□□□□ -1.76
RNU4-49P-201ENST00000516080 VAV2P52735 878 aa4.04□□□□□ -1.76
RNU4-49P-201ENST00000516080 SIM1P81133 766 aaPredicted RBP4.04□□□□□ -1.76
RNU4-49P-201ENST00000516080 SEPT2Q15019 361 aa4.04□□□□□ -1.76
RNU4-49P-201ENST00000516080 CYP2A13Q16696 494 aa4.04□□□□□ -1.76
RNU4-49P-201ENST00000516080 RNF219Q5W0B1 726 aaPredicted RBP4.04□□□□□ -1.76
RNU4-49P-201ENST00000516080 SDE2Q6IQ49 451 aa4.04□□□□□ -1.76
RNU4-49P-201ENST00000516080 UBE3BQ7Z3V4 1068 aa4.04□□□□□ -1.76
RNU4-49P-201ENST00000516080 KRT26Q7Z3Y9 468 aa4.04□□□□□ -1.76
RNU4-49P-201ENST00000516080 SPATS2Q86XZ4 545 aaKnown RBP4.04□□□□□ -1.76
RNU4-49P-201ENST00000516080 FITM2Q8N6M3 262 aa4.04□□□□□ -1.76
RNU4-49P-201ENST00000516080 FAM98AQ8NCA5 519 aaKnown RBP4.04□□□□□ -1.76
RNU4-49P-201ENST00000516080 WDR66Q8TBY9 1149 aa4.04□□□□□ -1.76
RNU4-49P-201ENST00000516080 NUP133Q8WUM0 1156 aa4.04□□□□□ -1.76
RNU4-49P-201ENST00000516080 NACC2Q96BF6 587 aa4.04□□□□□ -1.76
RNU4-49P-201ENST00000516080 PTCD3Q96EY7 689 aaKnown RBP4.04□□□□□ -1.76
RNU4-49P-201ENST00000516080 PNKPQ96T60 521 aa4.04□□□□□ -1.76
RNU4-49P-201ENST00000516080 LRFN3Q9BTN0 628 aa4.04□□□□□ -1.76
RNU4-49P-201ENST00000516080 TMX1Q9H3N1 280 aa4.04□□□□□ -1.76
RNU4-49P-201ENST00000516080 FBXO34Q9NWN3 711 aa4.04□□□□□ -1.76
RNU4-49P-201ENST00000516080 USP25Q9UHP3 1055 aa4.04□□□□□ -1.76
RNU4-49P-201ENST00000516080 PCDHGA2Q9Y5H1 932 aa4.04□□□□□ -1.76
RNU4-49P-201ENST00000516080 GPR45Q9Y5Y3 372 aa4.04□□□□□ -1.76
RNU4-49P-201ENST00000516080 AATKQ6ZMQ8 1374 aa4.03□□□□□ -1.76
RNU4-49P-201ENST00000516080 WASHC2AQ641Q2 1341 aa4.03□□□□□ -1.76
RNU4-49P-201ENST00000516080 SALL3Q9BXA9 1300 aa4.03□□□□□ -1.76
RNU4-49P-201ENST00000516080 PRKD3O94806 890 aa4.03□□□□□ -1.76
RNU4-49P-201ENST00000516080 PRSS23O95084 383 aa4.03□□□□□ -1.76
RNU4-49P-201ENST00000516080 VIL1P09327 827 aaKnown RBP4.03□□□□□ -1.76
RNU4-49P-201ENST00000516080 OSMP13725 252 aa4.03□□□□□ -1.76
RNU4-49P-201ENST00000516080 DDCP20711 480 aa4.03□□□□□ -1.76
RNU4-49P-201ENST00000516080 CNGA1P29973 690 aa4.03□□□□□ -1.76
RNU4-49P-201ENST00000516080 PTH2RP49190 550 aa4.03□□□□□ -1.76
RNU4-49P-201ENST00000516080 CREMQ03060 361 aa4.03□□□□□ -1.76
RNU4-49P-201ENST00000516080 MTM1Q13496 603 aa4.03□□□□□ -1.76
RNU4-49P-201ENST00000516080 ZKSCAN2Q63HK3 967 aa4.03□□□□□ -1.76
RNU4-49P-201ENST00000516080 AMOTL1Q8IY63 956 aa4.03□□□□□ -1.76
RNU4-49P-201ENST00000516080 LNX2Q8N448 690 aa4.03□□□□□ -1.76
RNU4-49P-201ENST00000516080 NLGN4YQ8NFZ3 816 aaPredicted RBP4.03□□□□□ -1.76
RNU4-49P-201ENST00000516080 CCHCR1Q8TD31 782 aa4.03□□□□□ -1.76
RNU4-49P-201ENST00000516080 SSH1Q8WYL5 1049 aa4.03□□□□□ -1.76
RNU4-49P-201ENST00000516080 MARS2Q96GW9 593 aaKnown RBP4.03□□□□□ -1.76
RNU4-49P-201ENST00000516080 MYOCQ99972 504 aa4.03□□□□□ -1.76
RNU4-49P-201ENST00000516080 C7orf25Q9BPX7 421 aa4.03□□□□□ -1.76
RNU4-49P-201ENST00000516080 GSTO2Q9H4Y5 243 aa4.03□□□□□ -1.76
RNU4-49P-201ENST00000516080 UNKLQ9H9P5 680 aaKnown RBP4.03□□□□□ -1.76
RNU4-49P-201ENST00000516080 DNM3Q9UQ16 869 aa4.03□□□□□ -1.76
RNU4-49P-201ENST00000516080 KAT6AQ92794 2004 aa4.02□□□□□ -1.77
RNU4-49P-201ENST00000516080 K7ESF4 209 aa4.02□□□□□ -1.77
RNU4-49P-201ENST00000516080 IGLV2-14P01704 120 aa4.02□□□□□ -1.77
RNU4-49P-201ENST00000516080 AMY1AP04745 511 aa4.02□□□□□ -1.77
RNU4-49P-201ENST00000516080 CDK4P11802 303 aa4.02□□□□□ -1.77
RNU4-49P-201ENST00000516080 WASP42768 502 aa4.02□□□□□ -1.77
RNU4-49P-201ENST00000516080 CACNA2D1P54289 1103 aa4.02□□□□□ -1.77
RNU4-49P-201ENST00000516080 DACT2Q5SW24 774 aa4.02□□□□□ -1.77
RNU4-49P-201ENST00000516080 SP5Q6BEB4 398 aaPredicted RBP4.02□□□□□ -1.77
RNU4-49P-201ENST00000516080 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.02□□□□□ -1.77
RNU4-49P-201ENST00000516080 ACTRT2Q8TDY3 377 aa4.02□□□□□ -1.77
RNU4-49P-201ENST00000516080 PDLIM2Q96JY6 352 aa4.02□□□□□ -1.77
RNU4-49P-201ENST00000516080 HEPHQ9BQS7 1158 aa4.02□□□□□ -1.77
RNU4-49P-201ENST00000516080 ZNF277Q9NRM2 450 aaPredicted RBP4.02□□□□□ -1.77
RNU4-49P-201ENST00000516080 SEMA4GQ9NTN9 838 aa4.02□□□□□ -1.77
RNU4-49P-201ENST00000516080 KCTD5Q9NXV2 234 aa4.02□□□□□ -1.77
RNU4-49P-201ENST00000516080 FOXJ2Q9P0K8 574 aa4.02□□□□□ -1.77
RNU4-49P-201ENST00000516080 SLC17A6Q9P2U8 582 aa4.02□□□□□ -1.77
RNU4-49P-201ENST00000516080 RUVBL1Q9Y265 456 aaKnown RBP4.02□□□□□ -1.77
RNU4-49P-201ENST00000516080 MYBBP1AQ9BQG0 1328 aaKnown RBP4.01□□□□□ -1.77
RNU4-49P-201ENST00000516080 TRGV11A0A075B6L2 103 aa4.01□□□□□ -1.77
RNU4-49P-201ENST00000516080 TCRBV7S2A1N4TA0A589 114 aa4.01□□□□□ -1.77
RNU4-49P-201ENST00000516080 CCDC78A2IDD5 438 aa4.01□□□□□ -1.77
RNU4-49P-201ENST00000516080 KIAA0391O15091 583 aaKnown RBP4.01□□□□□ -1.77
RNU4-49P-201ENST00000516080 PEX1O43933 1283 aa4.01□□□□□ -1.77
RNU4-49P-201ENST00000516080 AGXTP21549 392 aa4.01□□□□□ -1.77
RNU4-49P-201ENST00000516080 CTXN1P60606 82 aa4.01□□□□□ -1.77
RNU4-49P-201ENST00000516080 ERVK-21P61565 698 aa4.01□□□□□ -1.77
RNU4-49P-201ENST00000516080 NOMO3P69849 1222 aa4.01□□□□□ -1.77
RNU4-49P-201ENST00000516080 ATP8B2P98198 1209 aa4.01□□□□□ -1.77
RNU4-49P-201ENST00000516080 NHLH1Q02575 133 aa4.01□□□□□ -1.77
RNU4-49P-201ENST00000516080 NOMO2Q5JPE7 1267 aa4.01□□□□□ -1.77
RNU4-49P-201ENST00000516080 ZNF362Q5T0B9 420 aaPredicted RBP4.01□□□□□ -1.77
RNU4-49P-201ENST00000516080 GIMAP6Q6P9H5 292 aa4.01□□□□□ -1.77
RNU4-49P-201ENST00000516080 LHFPL2Q6ZUX7 228 aa4.01□□□□□ -1.77
RNU4-49P-201ENST00000516080 OR2I1PQ8NGU4 316 aa4.01□□□□□ -1.77
RNU4-49P-201ENST00000516080 ATL2Q8NHH9 583 aa4.01□□□□□ -1.77
RNU4-49P-201ENST00000516080 TBC1D15Q8TC07 691 aa4.01□□□□□ -1.77
RNU4-49P-201ENST00000516080 USP35Q9P2H5 1018 aa4.01□□□□□ -1.77
RNU4-49P-201ENST00000516080 SAP30BPQ9UHR5 308 aaKnown RBP4.01□□□□□ -1.77
RNU4-49P-201ENST00000516080 CDHR4A6H8M9 788 aa4□□□□□ -1.77
RNU4-49P-201ENST00000516080 ORC4O43929 436 aa4□□□□□ -1.77
RNU4-49P-201ENST00000516080 PROP1O75360 226 aa4□□□□□ -1.77
RNU4-49P-201ENST00000516080 HAUS5O94927 633 aa4□□□□□ -1.77
RNU4-49P-201ENST00000516080 FOLR3P41439 243 aa4□□□□□ -1.77
RNU4-49P-201ENST00000516080 KLF1Q13351 362 aaPredicted RBP4□□□□□ -1.77
RNU4-49P-201ENST00000516080 GEN1Q17RS7 908 aa4□□□□□ -1.77
RNU4-49P-201ENST00000516080 LRCH2Q5VUJ6 765 aa4□□□□□ -1.77
RNU4-49P-201ENST00000516080 RHOT1Q8IXI2 618 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms