RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 A0A087X0T9 212 aa8.21□□□□□ -1.1
SCARNA20.1-201ENST00000516009 A0A0U1RQJ8 604 aa8.21□□□□□ -1.1
SCARNA20.1-201ENST00000516009 A0A1W2PQ45 241 aaPredicted RBP8.21□□□□□ -1.1
SCARNA20.1-201ENST00000516009 A0A1W2PQY0 241 aa8.21□□□□□ -1.1
SCARNA20.1-201ENST00000516009 MEFVO15553 781 aaPredicted RBP8.21□□□□□ -1.1
SCARNA20.1-201ENST00000516009 CYP26A1O43174 497 aa8.21□□□□□ -1.1
SCARNA20.1-201ENST00000516009 ASS1P00966 412 aaKnown RBP8.21□□□□□ -1.1
SCARNA20.1-201ENST00000516009 CST3P01034 146 aaPredicted RBP8.21□□□□□ -1.1
SCARNA20.1-201ENST00000516009 CHRNA1P02708 482 aa8.21□□□□□ -1.1
SCARNA20.1-201ENST00000516009 NFICP08651 508 aa8.21□□□□□ -1.1
SCARNA20.1-201ENST00000516009 FAM228BP0C875 321 aa8.21□□□□□ -1.1
SCARNA20.1-201ENST00000516009 KRT5P13647 590 aa8.21□□□□□ -1.1
SCARNA20.1-201ENST00000516009 TNFAIP3P21580 790 aa8.21□□□□□ -1.1
SCARNA20.1-201ENST00000516009 MYL6P60660 151 aa8.21□□□□□ -1.1
SCARNA20.1-201ENST00000516009 MGAT3Q09327 533 aa8.21□□□□□ -1.1
SCARNA20.1-201ENST00000516009 CUL2Q13617 745 aa8.21□□□□□ -1.1
SCARNA20.1-201ENST00000516009 BMS1Q14692 1282 aaKnown RBP8.21□□□□□ -1.1
SCARNA20.1-201ENST00000516009 ZNF699Q32M78 642 aa8.21□□□□□ -1.1
SCARNA20.1-201ENST00000516009 TWF2Q6IBS0 349 aaKnown RBP8.21□□□□□ -1.1
SCARNA20.1-201ENST00000516009 JADE1Q6IE81 842 aa8.21□□□□□ -1.1
SCARNA20.1-201ENST00000516009 SPOPLQ6IQ16 392 aa8.21□□□□□ -1.1
SCARNA20.1-201ENST00000516009 ATRIPQ8WXE1 791 aa8.21□□□□□ -1.1
SCARNA20.1-201ENST00000516009 TAF4BQ92750 862 aa8.21□□□□□ -1.1
SCARNA20.1-201ENST00000516009 WNT8BQ93098 351 aa8.21□□□□□ -1.1
SCARNA20.1-201ENST00000516009 ELMO3Q96BJ8 720 aa8.21□□□□□ -1.1
SCARNA20.1-201ENST00000516009 AGPAT1Q99943 283 aa8.21□□□□□ -1.1
SCARNA20.1-201ENST00000516009 EIF2AQ9BY44 585 aaKnown RBP8.21□□□□□ -1.1
SCARNA20.1-201ENST00000516009 UNC93B1Q9H1C4 597 aa8.21□□□□□ -1.1
SCARNA20.1-201ENST00000516009 STARD7Q9NQZ5 370 aa8.21□□□□□ -1.1
SCARNA20.1-201ENST00000516009 WBP1LQ9NX94 342 aa8.21□□□□□ -1.1
SCARNA20.1-201ENST00000516009 MYO1AQ9UBC5 1043 aa8.21□□□□□ -1.1
SCARNA20.1-201ENST00000516009 DNAI1Q9UI46 699 aa8.21□□□□□ -1.1
SCARNA20.1-201ENST00000516009 PHF24Q9UPV7 400 aa8.21□□□□□ -1.1
SCARNA20.1-201ENST00000516009 DERAQ9Y315 318 aa8.21□□□□□ -1.1
SCARNA20.1-201ENST00000516009 C2CD2Q9Y426 696 aa8.21□□□□□ -1.1
SCARNA20.1-201ENST00000516009 NUB1Q9Y5A7 615 aa8.21□□□□□ -1.1
SCARNA20.1-201ENST00000516009 PAXBP1Q9Y5B6 917 aa8.21□□□□□ -1.1
SCARNA20.1-201ENST00000516009 A0A0U1RQG5 324 aaPredicted RBP8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 RCCD1A6NED2 376 aa8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 DNM1LO00429 736 aa8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 GPR182O15218 404 aa8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 PJA2O43164 708 aa8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 CAND2O75155 1236 aa8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 RECQL4O94761 1208 aa8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 ITGB3P05106 788 aa8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 KRT19P08727 400 aa8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 CASQ1P31415 396 aa8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 PDE6CP51160 858 aa8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 BPIFB4P59827 614 aa8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 YWHAEP62258 255 aaKnown RBP8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 NFX1Q12986 1120 aaKnown RBP8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 NAB2Q15742 525 aa8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 FAM26DQ5JW98 314 aa8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 ZNF569Q5MCW4 686 aa8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 UBXN11Q5T124 520 aa8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 SMYD5Q6GMV2 418 aa8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 ALKBH5Q6P6C2 394 aaKnown RBP8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 HACE1Q8IYU2 909 aa8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 SLC43A3Q8NBI5 491 aa8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 EPS8L1Q8TE68 723 aa8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 U2AF1L4Q8WU68 220 aaKnown RBP8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 DHX38Q92620 1227 aaKnown RBP8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 KIF12Q96FN5 646 aa8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 SNX27Q96L92 541 aa8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 DEFB118Q96PH6 123 aa8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 TSPAN18Q96SJ8 248 aa8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 ARID3AQ99856 593 aa8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 SYT11Q9BT88 431 aa8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 APOL6Q9BWW8 343 aa8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 SEZ6LQ9BYH1 1024 aa8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 NIF3L1Q9GZT8 377 aa8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 LACRTQ9GZZ8 138 aa8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 NXF3Q9H4D5 531 aaKnown RBP8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 APOBEC3GQ9HC16 384 aaKnown RBP8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 PAK6Q9NQU5 681 aaPredicted RBP8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 CHST12Q9NRB3 414 aa8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 TRMT13Q9NUP7 481 aaKnown RBP8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 SEPT11Q9NVA2 429 aaKnown RBP8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 DPP3Q9NY33 737 aa8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 TRIM10Q9UDY6 481 aa8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 NAGPAQ9UK23 515 aa8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 ITGA11Q9UKX5 1188 aa8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 GUCA1BQ9UMX6 200 aa8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 ST3GAL5Q9UNP4 418 aa8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 TFR2Q9UP52 801 aa8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 PCDHB4Q9Y5E5 795 aa8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 ATP8B3O60423 1300 aa8.2□□□□□ -1.1
SCARNA20.1-201ENST00000516009 SCN1AP35498 2009 aa8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 ARVCFO00192 962 aa8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 DDX3XO00571 662 aaKnown RBP eCLIP8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 XPOTO43592 962 aaKnown RBP8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 SGPL1O95470 568 aa8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 ABL1P00519 1130 aa8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 MYCP01106 439 aaPredicted RBP8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 H2AFZP0C0S5 128 aa8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 CCL5P13501 91 aa8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 P4HA1P13674 534 aa8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 CYP11B1P15538 503 aa8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 ZSCAN20P17040 1043 aaPredicted RBP8.19□□□□□ -1.1
SCARNA20.1-201ENST00000516009 ACO1P21399 889 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms