RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 INO80BQ9C086 356 aaPredicted RBP5.38□□□□□ -1.55
LINC01088-211ENST00000515597 GALNT9Q9HCQ5 603 aa5.38□□□□□ -1.55
LINC01088-211ENST00000515597 TBCCD1Q9NVR7 557 aa5.38□□□□□ -1.55
LINC01088-211ENST00000515597 FBXO34Q9NWN3 711 aa5.38□□□□□ -1.55
LINC01088-211ENST00000515597 DNAJC28Q9NX36 388 aa5.38□□□□□ -1.55
LINC01088-211ENST00000515597 FOXJ2Q9P0K8 574 aa5.38□□□□□ -1.55
LINC01088-211ENST00000515597 C1QL1O75973 258 aa5.37□□□□□ -1.55
LINC01088-211ENST00000515597 GPANK1O95872 356 aa5.37□□□□□ -1.55
LINC01088-211ENST00000515597 POMCP01189 267 aa5.37□□□□□ -1.55
LINC01088-211ENST00000515597 GCSHP23434 173 aa5.37□□□□□ -1.55
LINC01088-211ENST00000515597 GUCY1A2P33402 732 aa5.37□□□□□ -1.55
LINC01088-211ENST00000515597 KRTAP10-11P60412 298 aa5.37□□□□□ -1.55
LINC01088-211ENST00000515597 ATL2Q8NHH9 583 aa5.37□□□□□ -1.55
LINC01088-211ENST00000515597 ACTRT2Q8TDY3 377 aa5.37□□□□□ -1.55
LINC01088-211ENST00000515597 ZNF384Q8TF68 577 aa5.37□□□□□ -1.55
LINC01088-211ENST00000515597 FUBP1Q96AE4 644 aaKnown RBP5.37□□□□□ -1.55
LINC01088-211ENST00000515597 MYOCQ99972 504 aa5.37□□□□□ -1.55
LINC01088-211ENST00000515597 AIFM2Q9BRQ8 373 aa5.37□□□□□ -1.55
LINC01088-211ENST00000515597 SENP6Q9GZR1 1112 aaPredicted RBP5.37□□□□□ -1.55
LINC01088-211ENST00000515597 LANCL2Q9NS86 450 aa5.37□□□□□ -1.55
LINC01088-211ENST00000515597 LRIT1Q9P2V4 623 aa5.37□□□□□ -1.55
LINC01088-211ENST00000515597 MCM8Q9UJA3 840 aa5.37□□□□□ -1.55
LINC01088-211ENST00000515597 AJAP1Q9UKB5 411 aaPredicted RBP5.37□□□□□ -1.55
LINC01088-211ENST00000515597 WASHC2AQ641Q2 1341 aa5.37□□□□□ -1.55
LINC01088-211ENST00000515597 LRRC3CA6NJW4 275 aa5.36□□□□□ -1.55
LINC01088-211ENST00000515597 IL2RBP14784 551 aa5.36□□□□□ -1.55
LINC01088-211ENST00000515597 RARRES1P49788 294 aa5.36□□□□□ -1.55
LINC01088-211ENST00000515597 MRPS35P82673 323 aaKnown RBP5.36□□□□□ -1.55
LINC01088-211ENST00000515597 MGAT2Q10469 447 aa5.36□□□□□ -1.55
LINC01088-211ENST00000515597 UBE3BQ7Z3V4 1068 aa5.36□□□□□ -1.55
LINC01088-211ENST00000515597 BOD1Q96IK1 185 aa5.36□□□□□ -1.55
LINC01088-211ENST00000515597 ADI1Q9BV57 179 aa5.36□□□□□ -1.55
LINC01088-211ENST00000515597 WDR26Q9H7D7 661 aa5.36□□□□□ -1.55
LINC01088-211ENST00000515597 ZNF277Q9NRM2 450 aaPredicted RBP5.36□□□□□ -1.55
LINC01088-211ENST00000515597 SEMA4GQ9NTN9 838 aa5.36□□□□□ -1.55
LINC01088-211ENST00000515597 TMEM74BQ9NUR3 256 aa5.36□□□□□ -1.55
LINC01088-211ENST00000515597 MOCS1Q9NZB8 636 aa5.36□□□□□ -1.55
LINC01088-211ENST00000515597 FAM30AQ9NZY2 134 aa5.36□□□□□ -1.55
LINC01088-211ENST00000515597 SLC23A1Q9UHI7 598 aa5.36□□□□□ -1.55
LINC01088-211ENST00000515597 KCNE5Q9UJ90 142 aa5.36□□□□□ -1.55
LINC01088-211ENST00000515597 MTO1Q9Y2Z2 717 aaKnown RBP5.36□□□□□ -1.55
LINC01088-211ENST00000515597 MYADML2A6NDP7 307 aa5.35□□□□□ -1.55
LINC01088-211ENST00000515597 TRIM75PA6NK02 468 aa5.35□□□□□ -1.55
LINC01088-211ENST00000515597 IGSF3O75054 1194 aa5.35□□□□□ -1.55
LINC01088-211ENST00000515597 RBMXL2O75526 392 aaKnown RBP5.35□□□□□ -1.55
LINC01088-211ENST00000515597 ENDOD1O94919 500 aa5.35□□□□□ -1.55
LINC01088-211ENST00000515597 ZFPL1O95159 310 aa5.35□□□□□ -1.55
LINC01088-211ENST00000515597 OSMP13725 252 aa5.35□□□□□ -1.55
LINC01088-211ENST00000515597 AGXTP21549 392 aa5.35□□□□□ -1.55
LINC01088-211ENST00000515597 PCSK1P29120 753 aa5.35□□□□□ -1.55
LINC01088-211ENST00000515597 KLF1Q13351 362 aaPredicted RBP5.35□□□□□ -1.55
LINC01088-211ENST00000515597 UBXN2BQ14CS0 331 aa5.35□□□□□ -1.55
LINC01088-211ENST00000515597 NOMO1Q15155 1222 aa5.35□□□□□ -1.55
LINC01088-211ENST00000515597 CYP2A13Q16696 494 aa5.35□□□□□ -1.55
LINC01088-211ENST00000515597 GEN1Q17RS7 908 aa5.35□□□□□ -1.55
LINC01088-211ENST00000515597 PAPD7Q5XG87 772 aaKnown RBP5.35□□□□□ -1.55
LINC01088-211ENST00000515597 NECAB2Q7Z6G3 386 aa5.35□□□□□ -1.55
LINC01088-211ENST00000515597 CASKIN2Q8WXE0 1202 aa5.35□□□□□ -1.55
LINC01088-211ENST00000515597 SSH1Q8WYL5 1049 aa5.35□□□□□ -1.55
LINC01088-211ENST00000515597 PTCD3Q96EY7 689 aaKnown RBP5.35□□□□□ -1.55
LINC01088-211ENST00000515597 KLK15Q9H2R5 256 aa5.35□□□□□ -1.55
LINC01088-211ENST00000515597 UNKLQ9H9P5 680 aaKnown RBP5.35□□□□□ -1.55
LINC01088-211ENST00000515597 SPC25Q9HBM1 224 aa5.35□□□□□ -1.55
LINC01088-211ENST00000515597 ZBTB21Q9ULJ3 1066 aa5.35□□□□□ -1.55
LINC01088-211ENST00000515597 RUVBL1Q9Y265 456 aaKnown RBP5.35□□□□□ -1.55
LINC01088-211ENST00000515597 GPR45Q9Y5Y3 372 aa5.35□□□□□ -1.55
LINC01088-211ENST00000515597 ACTL7AQ9Y615 435 aa5.35□□□□□ -1.55
LINC01088-211ENST00000515597 CACNA2D1P54289 1103 aa5.34□□□□□ -1.55
LINC01088-211ENST00000515597 SEPT2Q15019 361 aa5.34□□□□□ -1.55
LINC01088-211ENST00000515597 INAVAQ3KP66 663 aa5.34□□□□□ -1.55
LINC01088-211ENST00000515597 OTUD7BQ6GQQ9 843 aa5.34□□□□□ -1.55
LINC01088-211ENST00000515597 FOXR2Q6PJQ5 311 aa5.34□□□□□ -1.55
LINC01088-211ENST00000515597 DDX42Q86XP3 938 aaKnown RBP eCLIP5.34□□□□□ -1.55
LINC01088-211ENST00000515597 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.34□□□□□ -1.55
LINC01088-211ENST00000515597 MARS2Q96GW9 593 aaKnown RBP5.34□□□□□ -1.55
LINC01088-211ENST00000515597 PUS7LQ9H0K6 701 aaKnown RBP5.34□□□□□ -1.55
LINC01088-211ENST00000515597 IL17RBQ9NRM6 502 aa5.34□□□□□ -1.55
LINC01088-211ENST00000515597 ASB6Q9NWX5 421 aa5.34□□□□□ -1.55
LINC01088-211ENST00000515597 PCDHGA2Q9Y5H1 932 aa5.34□□□□□ -1.55
LINC01088-211ENST00000515597 FAM171A2A8MVW0 826 aa5.33□□□□□ -1.56
LINC01088-211ENST00000515597 ERN1O75460 977 aaKnown RBP5.33□□□□□ -1.56
LINC01088-211ENST00000515597 GSPT1P15170 499 aaKnown RBP5.33□□□□□ -1.56
LINC01088-211ENST00000515597 SLC6A9P48067 706 aa5.33□□□□□ -1.56
LINC01088-211ENST00000515597 VAV2P52735 878 aa5.33□□□□□ -1.56
LINC01088-211ENST00000515597 FOXF2Q12947 444 aa5.33□□□□□ -1.56
LINC01088-211ENST00000515597 SEM1Q6ZVN7 128 aa5.33□□□□□ -1.56
LINC01088-211ENST00000515597 FAM43AQ8N2R8 423 aa5.33□□□□□ -1.56
LINC01088-211ENST00000515597 CNTD1Q8N815 330 aa5.33□□□□□ -1.56
LINC01088-211ENST00000515597 SSH3Q8TE77 659 aa5.33□□□□□ -1.56
LINC01088-211ENST00000515597 CYFIP2Q96F07 1278 aa5.33□□□□□ -1.56
LINC01088-211ENST00000515597 PDLIM2Q96JY6 352 aa5.33□□□□□ -1.56
LINC01088-211ENST00000515597 TMEM140Q9NV12 185 aa5.33□□□□□ -1.56
LINC01088-211ENST00000515597 KCTD5Q9NXV2 234 aa5.33□□□□□ -1.56
LINC01088-211ENST00000515597 SLC5A4Q9NY91 659 aa5.33□□□□□ -1.56
LINC01088-211ENST00000515597 HSFX1Q9UBD0 423 aa5.33□□□□□ -1.56
LINC01088-211ENST00000515597 ATP8A1Q9Y2Q0 1164 aa5.33□□□□□ -1.56
LINC01088-211ENST00000515597 CADPSQ9ULU8 1353 aa5.32□□□□□ -1.56
LINC01088-211ENST00000515597 TEX33O43247 280 aa5.32□□□□□ -1.56
LINC01088-211ENST00000515597 GPR32O75388 356 aa5.32□□□□□ -1.56
LINC01088-211ENST00000515597 CKBP12277 381 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms