RNA–Protein interactions for RNA: ENST00000515499.5

TRIM41-208, Transcript of tripartite motif containing 41, humanhuman

TSL 3

Gene TRIM41, Length 914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-208ENST00000515499 NELFBQ8WX92 580 aa22.55■■□□□ 1.2
TRIM41-208ENST00000515499 RABGGTAQ92696 567 aa22.55■■□□□ 1.2
TRIM41-208ENST00000515499 SYAP1Q96A49 352 aaPredicted RBP22.55■■□□□ 1.2
TRIM41-208ENST00000515499 MRPL38Q96DV4 380 aaKnown RBP22.55■■□□□ 1.2
TRIM41-208ENST00000515499 TMEM63CQ9P1W3 806 aa22.55■■□□□ 1.2
TRIM41-208ENST00000515499 ADAM28Q9UKQ2 775 aa22.55■■□□□ 1.2
TRIM41-208ENST00000515499 PLXNA4Q9HCM2 1894 aa22.55■■□□□ 1.2
TRIM41-208ENST00000515499 COL4A4P53420 1690 aaPredicted RBP22.55■■□□□ 1.2
TRIM41-208ENST00000515499 BICDL2A1A5D9 508 aa22.54■■□□□ 1.2
TRIM41-208ENST00000515499 PODXLO00592 558 aa22.54■■□□□ 1.2
TRIM41-208ENST00000515499 CETN3O15182 167 aa22.54■■□□□ 1.2
TRIM41-208ENST00000515499 B3GAT3O94766 335 aa22.54■■□□□ 1.2
TRIM41-208ENST00000515499 EFEMP2O95967 443 aa22.54■■□□□ 1.2
TRIM41-208ENST00000515499 PAK1Q13153 545 aa22.54■■□□□ 1.2
TRIM41-208ENST00000515499 CAMK1Q14012 370 aa22.54■■□□□ 1.2
TRIM41-208ENST00000515499 ZC3H3Q8IXZ2 948 aaKnown RBP22.54■■□□□ 1.2
TRIM41-208ENST00000515499 FNBP1Q96RU3 617 aa22.54■■□□□ 1.2
TRIM41-208ENST00000515499 MTCH2Q9Y6C9 303 aa22.54■■□□□ 1.2
TRIM41-208ENST00000515499 TRIM49BA6NDI0 452 aa22.53■■□□□ 1.2
TRIM41-208ENST00000515499 F8W810 466 aa22.53■■□□□ 1.2
TRIM41-208ENST00000515499 TULP1O00294 542 aaPredicted RBP22.53■■□□□ 1.2
TRIM41-208ENST00000515499 AKAP3O75969 853 aa22.53■■□□□ 1.2
TRIM41-208ENST00000515499 KIF4AO95239 1232 aa22.53■■□□□ 1.2
TRIM41-208ENST00000515499 IGFBP4P22692 258 aa22.53■■□□□ 1.2
TRIM41-208ENST00000515499 PSMC2P35998 433 aaKnown RBP22.53■■□□□ 1.2
TRIM41-208ENST00000515499 TFAMQ00059 246 aaKnown RBP22.53■■□□□ 1.2
TRIM41-208ENST00000515499 PDE12Q6L8Q7 609 aaKnown RBP22.53■■□□□ 1.2
TRIM41-208ENST00000515499 WDR49Q8IV35 697 aa22.53■■□□□ 1.2
TRIM41-208ENST00000515499 CCDC127Q96BQ5 260 aa22.53■■□□□ 1.2
TRIM41-208ENST00000515499 TLR9Q9NR96 1032 aa22.53■■□□□ 1.2
TRIM41-208ENST00000515499 INTS13Q9NVM9 706 aa22.53■■□□□ 1.2
TRIM41-208ENST00000515499 DPP3Q9NY33 737 aa22.53■■□□□ 1.2
TRIM41-208ENST00000515499 CTNND2Q9UQB3 1225 aa22.53■■□□□ 1.2
TRIM41-208ENST00000515499 FOSL2P15408 326 aa22.52■■□□□ 1.2
TRIM41-208ENST00000515499 GUCY2FP51841 1108 aa22.52■■□□□ 1.2
TRIM41-208ENST00000515499 ELAVL2Q12926 359 aaKnown RBP22.52■■□□□ 1.2
TRIM41-208ENST00000515499 BMS1Q14692 1282 aaKnown RBP22.52■■□□□ 1.2
TRIM41-208ENST00000515499 DUOXA2Q1HG44 320 aa22.52■■□□□ 1.2
TRIM41-208ENST00000515499 SKOR2Q2VWA4 1001 aaPredicted RBP22.52■■□□□ 1.2
TRIM41-208ENST00000515499 TTI2Q6NXR4 508 aa22.52■■□□□ 1.2
TRIM41-208ENST00000515499 CAVIN1Q6NZI2 390 aaKnown RBP22.52■■□□□ 1.2
TRIM41-208ENST00000515499 FUT10Q6P4F1 479 aa22.52■■□□□ 1.2
TRIM41-208ENST00000515499 CD300LGQ6UXG3 332 aa22.52■■□□□ 1.2
TRIM41-208ENST00000515499 FAM186BQ8IYM0 893 aa22.52■■□□□ 1.2
TRIM41-208ENST00000515499 RNF168Q8IYW5 571 aaPredicted RBP22.52■■□□□ 1.2
TRIM41-208ENST00000515499 VPS52Q8N1B4 723 aa22.52■■□□□ 1.2
TRIM41-208ENST00000515499 MKNK1Q9BUB5 465 aa22.52■■□□□ 1.2
TRIM41-208ENST00000515499 VN1R3Q9BXE9 311 aa22.52■■□□□ 1.2
TRIM41-208ENST00000515499 DACH1Q9UI36 760 aa22.52■■□□□ 1.2
TRIM41-208ENST00000515499 SF3B1O75533 1304 aaKnown RBP eCLIP22.52■■□□□ 1.26e-7■■■■■ 41.6
TRIM41-208ENST00000515499 TRANK1O15050 2925 aa22.51■■□□□ 1.19
TRIM41-208ENST00000515499 ANO9A1A5B4 782 aa22.51■■□□□ 1.19
TRIM41-208ENST00000515499 PIRO00625 290 aa22.51■■□□□ 1.19
TRIM41-208ENST00000515499 SOD2P04179 222 aa22.51■■□□□ 1.19
TRIM41-208ENST00000515499 TMEM191BP0C7N4 346 aa22.51■■□□□ 1.19
TRIM41-208ENST00000515499 DLATP10515 647 aaKnown RBP22.51■■□□□ 1.19
TRIM41-208ENST00000515499 TNNI1P19237 187 aa22.51■■□□□ 1.19
TRIM41-208ENST00000515499 ERVFC1P60507 584 aa22.51■■□□□ 1.19
TRIM41-208ENST00000515499 ENPEPQ07075 957 aa22.51■■□□□ 1.19
TRIM41-208ENST00000515499 CT47A1Q5JQC4 288 aaPredicted RBP22.51■■□□□ 1.19
TRIM41-208ENST00000515499 C9orf57Q5W0N0 161 aa22.51■■□□□ 1.19
TRIM41-208ENST00000515499 USP37Q86T82 979 aa22.51■■□□□ 1.19
TRIM41-208ENST00000515499 C3orf58Q8NDZ4 430 aa22.51■■□□□ 1.19
TRIM41-208ENST00000515499 TMC2Q8TDI7 906 aa22.51■■□□□ 1.19
TRIM41-208ENST00000515499 PARD3BQ8TEW8 1205 aa22.51■■□□□ 1.19
TRIM41-208ENST00000515499 HASPINQ8TF76 798 aa22.51■■□□□ 1.19
TRIM41-208ENST00000515499 ANKRD36BP1Q96IX9 119 aa22.51■■□□□ 1.19
TRIM41-208ENST00000515499 CEP63Q96MT8 703 aa22.51■■□□□ 1.19
TRIM41-208ENST00000515499 CGRRF1Q99675 332 aa22.51■■□□□ 1.19
TRIM41-208ENST00000515499 DUSP9Q99956 384 aaKnown RBP22.51■■□□□ 1.19
TRIM41-208ENST00000515499 HERC2P3Q9BVR0 1158 aa22.51■■□□□ 1.19
TRIM41-208ENST00000515499 GZF1Q9H116 711 aaPredicted RBP22.51■■□□□ 1.19
TRIM41-208ENST00000515499 NGRNQ9NPE2 291 aaKnown RBP22.51■■□□□ 1.19
TRIM41-208ENST00000515499 RWDD2AQ9UIY3 292 aa22.51■■□□□ 1.19
TRIM41-208ENST00000515499 FSCN2O14926 492 aa22.5■■□□□ 1.19
TRIM41-208ENST00000515499 TRAPPC3O43617 180 aa22.5■■□□□ 1.19
TRIM41-208ENST00000515499 TNNC2P02585 160 aa22.5■■□□□ 1.19
TRIM41-208ENST00000515499 PAX3P23760 479 aa22.5■■□□□ 1.19
TRIM41-208ENST00000515499 IGFBP6P24592 240 aaPredicted RBP22.5■■□□□ 1.19
TRIM41-208ENST00000515499 STX17P56962 302 aa22.5■■□□□ 1.19
TRIM41-208ENST00000515499 CLDN10P78369 228 aa22.5■■□□□ 1.19
TRIM41-208ENST00000515499 DPCR1Q3MIW9 517 aa22.5■■□□□ 1.19
TRIM41-208ENST00000515499 SASS6Q6UVJ0 657 aa22.5■■□□□ 1.19
TRIM41-208ENST00000515499 INTS8Q75QN2 995 aaKnown RBP22.5■■□□□ 1.19
TRIM41-208ENST00000515499 TMC7Q7Z402 723 aa22.5■■□□□ 1.19
TRIM41-208ENST00000515499 PLEKHO2Q8TD55 490 aa22.5■■□□□ 1.19
TRIM41-208ENST00000515499 MICAL1Q8TDZ2 1067 aa22.5■■□□□ 1.19
TRIM41-208ENST00000515499 POP1Q99575 1024 aaKnown RBP22.5■■□□□ 1.19
TRIM41-208ENST00000515499 TCF25Q9BQ70 676 aa22.5■■□□□ 1.19
TRIM41-208ENST00000515499 GPR62Q9BZJ7 368 aa22.5■■□□□ 1.19
TRIM41-208ENST00000515499 ZBP1Q9H171 429 aa22.5■■□□□ 1.19
TRIM41-208ENST00000515499 ITGA11Q9UKX5 1188 aa22.5■■□□□ 1.19
TRIM41-208ENST00000515499 NUB1Q9Y5A7 615 aa22.5■■□□□ 1.19
TRIM41-208ENST00000515499 PTPRJQ12913 1337 aa22.5■■□□□ 1.19
TRIM41-208ENST00000515499 SLC16A3O15427 465 aaKnown RBP22.49■■□□□ 1.19
TRIM41-208ENST00000515499 CTSAP10619 480 aa22.49■■□□□ 1.19
TRIM41-208ENST00000515499 EPB41P11171 864 aaKnown RBP22.49■■□□□ 1.19
TRIM41-208ENST00000515499 KRT13P13646 458 aa22.49■■□□□ 1.19
TRIM41-208ENST00000515499 IRS1P35568 1242 aa22.49■■□□□ 1.19
TRIM41-208ENST00000515499 AP3M2P53677 418 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms