RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 RRM1P23921 792 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 MAPK4P31152 587 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 NSFP46459 744 aaKnown RBP8.76□□□□□ -1.01
CPNE4-211ENST00000514439 RWDD2BP57060 319 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 CENPCQ03188 943 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 LAMTOR4Q0VGL1 99 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 NCOA4Q13772 614 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 C2CD6Q53TS8 623 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 WDR78Q5VTH9 848 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 KCTD16Q68DU8 428 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 DUPD1Q68J44 220 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 SCARA3Q6AZY7 606 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 LLGL2Q6P1M3 1020 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 KCNV1Q6PIU1 500 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 TMEM270Q6UE05 265 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 SRCAPQ6ZRS2 3230 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 TMC3Q7Z5M5 1100 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 ZBTB33Q86T24 672 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 RNF149Q8NC42 400 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 TCP11Q8WWU5 503 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 CYFIP2Q96F07 1278 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 SPATA33Q96N06 139 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 ERP44Q9BS26 406 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 MRPL4Q9BYD3 311 aaKnown RBP8.76□□□□□ -1.01
CPNE4-211ENST00000514439 SPON1Q9HCB6 807 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.76□□□□□ -1.01
CPNE4-211ENST00000514439 CALCOCO1Q9P1Z2 691 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 PCDHB4Q9Y5E5 795 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 MROH7Q68CQ1 1323 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 IGKV6-21A0A0C4DH24 114 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 GAS2O43903 313 aaKnown RBP8.76□□□□□ -1.01
CPNE4-211ENST00000514439 PRKCBP05771 671 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 CFHP08603 1231 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 MYBL1P10243 752 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 TBXAS1P24557 533 aaPredicted RBP8.76□□□□□ -1.01
CPNE4-211ENST00000514439 GNA15P30679 374 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 CHRNA3P32297 505 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 PTGIRP43119 386 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 MXD4Q14582 209 aaPredicted RBP8.76□□□□□ -1.01
CPNE4-211ENST00000514439 PLCB4Q15147 1175 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 C9orf131Q5VYM1 1079 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 GPAT2Q6NUI2 795 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 TTC27Q6P3X3 843 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 LRIG3Q6UXM1 1119 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 LRRC31Q6UY01 552 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 MON1BQ7L1V2 547 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 PLPPR4Q7Z2D5 763 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 PHLDB2Q86SQ0 1253 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 SLC13A5Q86YT5 568 aaPredicted RBP8.76□□□□□ -1.01
CPNE4-211ENST00000514439 PASD1Q8IV76 773 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 RBBP8NLQ8NC74 664 aaPredicted RBP8.76□□□□□ -1.01
CPNE4-211ENST00000514439 TRAPPC12Q8WVT3 735 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 COPS5Q92905 334 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 MAGOHBQ96A72 148 aaKnown RBP8.76□□□□□ -1.01
CPNE4-211ENST00000514439 TRIM11Q96F44 468 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 ACO2Q99798 780 aaKnown RBP8.76□□□□□ -1.01
CPNE4-211ENST00000514439 TCHPQ9BT92 498 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 RASAL2Q9UJF2 1139 aa8.76□□□□□ -1.01
CPNE4-211ENST00000514439 H0YGN5 161 aa8.75□□□□□ -1.01
CPNE4-211ENST00000514439 ABLIM1O14639 778 aa8.75□□□□□ -1.01
CPNE4-211ENST00000514439 OSBPP22059 807 aa8.75□□□□□ -1.01
CPNE4-211ENST00000514439 SSTR3P32745 418 aaPredicted RBP8.75□□□□□ -1.01
CPNE4-211ENST00000514439 NOMO3P69849 1222 aa8.75□□□□□ -1.01
CPNE4-211ENST00000514439 MTMR3Q13615 1198 aa8.75□□□□□ -1.01
CPNE4-211ENST00000514439 SIX1Q15475 284 aaPredicted RBP8.75□□□□□ -1.01
CPNE4-211ENST00000514439 MAPK6Q16659 721 aa8.75□□□□□ -1.01
CPNE4-211ENST00000514439 CYP1B1Q16678 543 aa8.75□□□□□ -1.01
CPNE4-211ENST00000514439 DNAJC21Q5F1R6 531 aaKnown RBP8.75□□□□□ -1.01
CPNE4-211ENST00000514439 CEP85LQ5SZL2 805 aa8.75□□□□□ -1.01
CPNE4-211ENST00000514439 TMEM63BQ5T3F8 832 aa8.75□□□□□ -1.01
CPNE4-211ENST00000514439 CCDC62Q6P9F0 684 aa8.75□□□□□ -1.01
CPNE4-211ENST00000514439 FASTKD5Q7L8L6 764 aaKnown RBP8.75□□□□□ -1.01
CPNE4-211ENST00000514439 WDR49Q8IV35 697 aa8.75□□□□□ -1.01
CPNE4-211ENST00000514439 ZBTB8OSQ8IWT0 167 aa8.75□□□□□ -1.01
CPNE4-211ENST00000514439 DHX37Q8IY37 1157 aaKnown RBP8.75□□□□□ -1.01
CPNE4-211ENST00000514439 ABRAQ8N0Z2 381 aa8.75□□□□□ -1.01
CPNE4-211ENST00000514439 OR2W6PQ8NHA6 318 aa8.75□□□□□ -1.01
CPNE4-211ENST00000514439 UBLCP1Q8WVY7 318 aaPredicted RBP8.75□□□□□ -1.01
CPNE4-211ENST00000514439 FMO2Q99518 471 aa8.75□□□□□ -1.01
CPNE4-211ENST00000514439 C11orf70Q9BRQ4 267 aa8.75□□□□□ -1.01
CPNE4-211ENST00000514439 IMPG2Q9BZV3 1241 aa8.75□□□□□ -1.01
CPNE4-211ENST00000514439 MTMR12Q9C0I1 747 aa8.75□□□□□ -1.01
CPNE4-211ENST00000514439 PCYOX1Q9UHG3 505 aa8.75□□□□□ -1.01
CPNE4-211ENST00000514439 CNTN6Q9UQ52 1028 aa8.75□□□□□ -1.01
CPNE4-211ENST00000514439 NFS1Q9Y697 457 aa8.75□□□□□ -1.01
CPNE4-211ENST00000514439 OGTO15294 1046 aa8.75□□□□□ -1.01
CPNE4-211ENST00000514439 GJB1P08034 283 aa8.75□□□□□ -1.01
CPNE4-211ENST00000514439 MCL1Q07820 350 aa8.75□□□□□ -1.01
CPNE4-211ENST00000514439 DHX9Q08211 1270 aaKnown RBP8.75□□□□□ -1.01
CPNE4-211ENST00000514439 GRM1Q13255 1194 aa8.75□□□□□ -1.01
CPNE4-211ENST00000514439 CCDC137Q6PK04 289 aaKnown RBP8.75□□□□□ -1.01
CPNE4-211ENST00000514439 TRIM72Q6ZMU5 477 aa8.75□□□□□ -1.01
CPNE4-211ENST00000514439 USP50Q70EL3 339 aaPredicted RBP8.75□□□□□ -1.01
CPNE4-211ENST00000514439 RHPN2Q8IUC4 686 aa8.75□□□□□ -1.01
CPNE4-211ENST00000514439 FAM212AQ96EL1 285 aa8.75□□□□□ -1.01
CPNE4-211ENST00000514439 ZNF668Q96K58 619 aaPredicted RBP8.75□□□□□ -1.01
CPNE4-211ENST00000514439 ATP6V1G3Q96LB4 118 aa8.75□□□□□ -1.01
CPNE4-211ENST00000514439 CAPS2Q9BXY5 557 aa8.75□□□□□ -1.01
CPNE4-211ENST00000514439 PDGFCQ9NRA1 345 aa8.75□□□□□ -1.01
CPNE4-211ENST00000514439 ZDHHC18Q9NUE0 388 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms