RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 DSC1Q08554 894 aa3.65□□□□□ -1.82
CHD1-211ENST00000514344 MAPK6Q16659 721 aa3.65□□□□□ -1.82
CHD1-211ENST00000514344 USP39Q53GS9 565 aaKnown RBP3.65□□□□□ -1.82
CHD1-211ENST00000514344 MIS18BP1Q6P0N0 1132 aa3.65□□□□□ -1.82
CHD1-211ENST00000514344 C1orf228Q6PIY5 440 aa3.65□□□□□ -1.82
CHD1-211ENST00000514344 LRRC69Q6ZNQ3 347 aa3.65□□□□□ -1.82
CHD1-211ENST00000514344 TOGARAM2Q6ZUX3 1019 aa3.65□□□□□ -1.82
CHD1-211ENST00000514344 DEFB119Q8N690 84 aa3.65□□□□□ -1.82
CHD1-211ENST00000514344 ZNF513Q8N8E2 541 aaPredicted RBP3.65□□□□□ -1.82
CHD1-211ENST00000514344 PNMA5Q96PV4 448 aa3.65□□□□□ -1.82
CHD1-211ENST00000514344 MXRA8Q9BRK3 442 aa3.65□□□□□ -1.82
CHD1-211ENST00000514344 GABBR1Q9UBS5 961 aa3.65□□□□□ -1.82
CHD1-211ENST00000514344 ADGRG4Q8IZF6 3080 aa3.65□□□□□ -1.83
CHD1-211ENST00000514344 SF3B1O75533 1304 aaKnown RBP eCLIP3.65□□□□□ -1.832e-6■■■■■ 89.1
CHD1-211ENST00000514344 CABIN1Q9Y6J0 2220 aa3.65□□□□□ -1.83
CHD1-211ENST00000514344 MUC22E2RYF6 1773 aaPredicted RBP3.65□□□□□ -1.83
CHD1-211ENST00000514344 hCG_1642624A0A1W2PR95 340 aa3.65□□□□□ -1.83
CHD1-211ENST00000514344 ENO4A6NNW6 628 aa3.65□□□□□ -1.83
CHD1-211ENST00000514344 PIK3CDO00329 1044 aa3.65□□□□□ -1.83
CHD1-211ENST00000514344 ZNF213O14771 459 aa3.65□□□□□ -1.83
CHD1-211ENST00000514344 CHADO15335 359 aa3.65□□□□□ -1.83
CHD1-211ENST00000514344 ITGA4P13612 1032 aa3.65□□□□□ -1.83
CHD1-211ENST00000514344 ITPKAP23677 461 aa3.65□□□□□ -1.83
CHD1-211ENST00000514344 CSRP3P50461 194 aa3.65□□□□□ -1.83
CHD1-211ENST00000514344 ARPP19P56211 112 aa3.65□□□□□ -1.83
CHD1-211ENST00000514344 GFPT1Q06210 699 aaPredicted RBP3.65□□□□□ -1.83
CHD1-211ENST00000514344 TEAD2Q15562 447 aa3.65□□□□□ -1.83
CHD1-211ENST00000514344 ALX1Q15699 326 aa3.65□□□□□ -1.83
CHD1-211ENST00000514344 C4orf17Q53FE4 359 aa3.65□□□□□ -1.83
CHD1-211ENST00000514344 PRSS36Q5K4E3 855 aa3.65□□□□□ -1.83
CHD1-211ENST00000514344 STXBP5Q5T5C0 1151 aa3.65□□□□□ -1.83
CHD1-211ENST00000514344 NAIF1Q69YI7 327 aaPredicted RBP3.65□□□□□ -1.83
CHD1-211ENST00000514344 KRT25Q7Z3Z0 450 aa3.65□□□□□ -1.83
CHD1-211ENST00000514344 HS6ST3Q8IZP7 471 aa3.65□□□□□ -1.83
CHD1-211ENST00000514344 SYNPOQ8N3V7 929 aa3.65□□□□□ -1.83
CHD1-211ENST00000514344 LINC01465Q8N7H1 131 aa3.65□□□□□ -1.83
CHD1-211ENST00000514344 LSM14AQ8ND56 463 aaKnown RBP3.65□□□□□ -1.83
CHD1-211ENST00000514344 LY9Q9HBG7 655 aa3.65□□□□□ -1.83
CHD1-211ENST00000514344 AGO4Q9HCK5 861 aaKnown RBP3.65□□□□□ -1.83
CHD1-211ENST00000514344 FBRSL1Q9HCM7 1045 aaKnown RBP3.65□□□□□ -1.83
CHD1-211ENST00000514344 KLK14Q9P0G3 267 aa3.65□□□□□ -1.83
CHD1-211ENST00000514344 PCDHA6Q9UN73 950 aa3.65□□□□□ -1.83
CHD1-211ENST00000514344 APOBEC2Q9Y235 224 aaKnown RBP3.65□□□□□ -1.83
CHD1-211ENST00000514344 PCDHA8Q9Y5H6 950 aa3.65□□□□□ -1.83
CHD1-211ENST00000514344 COL5A1P20908 1838 aaPredicted RBP3.65□□□□□ -1.83
CHD1-211ENST00000514344 CELSR2Q9HCU4 2923 aa3.65□□□□□ -1.83
CHD1-211ENST00000514344 NFASCO94856 1347 aa3.65□□□□□ -1.83
CHD1-211ENST00000514344 CSMD2Q7Z408 3487 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 TEX51A0A1B0GUA7 166 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 CAPN8A6NHC0 703 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 PLK4O00444 970 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 KIF4AO95239 1232 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 APBB3O95704 486 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 C1RP00736 705 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 EGFP01133 1207 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 PRKCBP05771 671 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 PCP11498 1178 aaKnown RBP3.64□□□□□ -1.83
CHD1-211ENST00000514344 AKAP5P24588 427 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 LSM11P83369 360 aaKnown RBP eCLIP3.64□□□□□ -1.83
CHD1-211ENST00000514344 GRSF1Q12849 480 aaKnown RBP eCLIP3.64□□□□□ -1.83
CHD1-211ENST00000514344 DMC1Q14565 340 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 CEP55Q53EZ4 464 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 C2orf27AQ580R0 203 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 CYP4A22Q5TCH4 519 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 SYT12Q8IV01 421 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 CMTR1Q8N1G2 835 aaKnown RBP3.64□□□□□ -1.83
CHD1-211ENST00000514344 SMG8Q8ND04 991 aaKnown RBP3.64□□□□□ -1.83
CHD1-211ENST00000514344 OTUD7AQ8TE49 926 aaPredicted RBP3.64□□□□□ -1.83
CHD1-211ENST00000514344 LRRC3BQ96PB8 259 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 EIF2AQ9BY44 585 aaKnown RBP3.64□□□□□ -1.83
CHD1-211ENST00000514344 PRDM16Q9HAZ2 1276 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 AGPAT5Q9NUQ2 364 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 DKK4Q9UBT3 224 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 EVLQ9UI08 416 aaPredicted RBP3.64□□□□□ -1.83
CHD1-211ENST00000514344 IPPQ9Y573 584 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 MAFBQ9Y5Q3 323 aaPredicted RBP3.64□□□□□ -1.83
CHD1-211ENST00000514344 CNTNAP2Q9UHC6 1331 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 A0A1W2PRU2 124 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 OTOL1A6NHN0 477 aaPredicted RBP3.64□□□□□ -1.83
CHD1-211ENST00000514344 IPO5O00410 1097 aaKnown RBP3.64□□□□□ -1.83
CHD1-211ENST00000514344 ZNF197O14709 1029 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 RRP8O43159 456 aaKnown RBP3.64□□□□□ -1.83
CHD1-211ENST00000514344 MYF5P13349 255 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 ELF1P32519 619 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 ZNF76P36508 570 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 PRKCEQ02156 737 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 FCHO2Q0JRZ9 810 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 MTERF2Q49AM1 385 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 CCDC178Q5BJE1 867 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 FSTL4Q6MZW2 842 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 SLC23A3Q6PIS1 610 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 CDR2LQ86X02 465 aaPredicted RBP3.64□□□□□ -1.83
CHD1-211ENST00000514344 ARID3BQ8IVW6 561 aaPredicted RBP3.64□□□□□ -1.83
CHD1-211ENST00000514344 NAXDQ8IW45 347 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 CCDC82Q8N4S0 544 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 TTC16Q8NEE8 873 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 MDGA1Q8NFP4 955 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 TSTD1Q8NFU3 115 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 PI4K2BQ8TCG2 481 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 SETD7Q8WTS6 366 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms