RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 DNAJC25Q9H1X3 360 aa10.63□□□□□ -0.71
TOPBP1-209ENST00000513818 MMRN2Q9H8L6 949 aa10.63□□□□□ -0.71
TOPBP1-209ENST00000513818 ALG13Q9NP73 1137 aaKnown RBP10.63□□□□□ -0.71
TOPBP1-209ENST00000513818 CGNQ9P2M7 1197 aaKnown RBP10.63□□□□□ -0.71
TOPBP1-209ENST00000513818 KANSL3Q9P2N6 904 aa10.63□□□□□ -0.71
TOPBP1-209ENST00000513818 KIAA0391O15091 583 aaKnown RBP10.62□□□□□ -0.71
TOPBP1-209ENST00000513818 GRM6O15303 877 aa10.62□□□□□ -0.71
TOPBP1-209ENST00000513818 FGF18O76093 207 aa10.62□□□□□ -0.71
TOPBP1-209ENST00000513818 DNAJB1P25685 340 aa10.62□□□□□ -0.71
TOPBP1-209ENST00000513818 BMPR1AP36894 532 aa10.62□□□□□ -0.71
TOPBP1-209ENST00000513818 SNRPFP62306 86 aaKnown RBP10.62□□□□□ -0.71
TOPBP1-209ENST00000513818 LRRC63Q05C16 580 aa10.62□□□□□ -0.71
TOPBP1-209ENST00000513818 TYRO3Q06418 890 aa10.62□□□□□ -0.71
TOPBP1-209ENST00000513818 ADAM9Q13443 819 aa10.62□□□□□ -0.71
TOPBP1-209ENST00000513818 GPM6BQ13491 265 aa10.62□□□□□ -0.71
TOPBP1-209ENST00000513818 STX1AQ16623 288 aa10.62□□□□□ -0.71
TOPBP1-209ENST00000513818 EDRF1Q3B7T1 1238 aa10.62□□□□□ -0.71
TOPBP1-209ENST00000513818 HSP90AA4PQ58FG1 418 aa10.62□□□□□ -0.71
TOPBP1-209ENST00000513818 SLC9A9Q8IVB4 645 aa10.62□□□□□ -0.71
TOPBP1-209ENST00000513818 MLKLQ8NB16 471 aa10.62□□□□□ -0.71
TOPBP1-209ENST00000513818 ELMO3Q96BJ8 720 aa10.62□□□□□ -0.71
TOPBP1-209ENST00000513818 B3GALT6Q96L58 329 aa10.62□□□□□ -0.71
TOPBP1-209ENST00000513818 TMEM175Q9BSA9 504 aa10.62□□□□□ -0.71
TOPBP1-209ENST00000513818 VN1R3Q9BXE9 311 aa10.62□□□□□ -0.71
TOPBP1-209ENST00000513818 PLEKHA5Q9HAU0 1116 aa10.62□□□□□ -0.71
TOPBP1-209ENST00000513818 UBQLN1Q9UMX0 589 aaKnown RBP10.62□□□□□ -0.71
TOPBP1-209ENST00000513818 LRRIQ3A6PVS8 624 aaPredicted RBP10.61□□□□□ -0.71
TOPBP1-209ENST00000513818 PODXLO00592 558 aa10.61□□□□□ -0.71
TOPBP1-209ENST00000513818 CETN3O15182 167 aa10.61□□□□□ -0.71
TOPBP1-209ENST00000513818 IL18RAPO95256 599 aa10.61□□□□□ -0.71
TOPBP1-209ENST00000513818 TMEM191BP0C7N4 346 aa10.61□□□□□ -0.71
TOPBP1-209ENST00000513818 EPB41P11171 864 aaKnown RBP10.61□□□□□ -0.71
TOPBP1-209ENST00000513818 PPP1R2P41236 205 aa10.61□□□□□ -0.71
TOPBP1-209ENST00000513818 BRCC3P46736 316 aa10.61□□□□□ -0.71
TOPBP1-209ENST00000513818 ALDH7A1P49419 539 aaKnown RBP10.61□□□□□ -0.71
TOPBP1-209ENST00000513818 HSP90AA2PQ14568 343 aaPredicted RBP10.61□□□□□ -0.71
TOPBP1-209ENST00000513818 PSMD6Q15008 389 aa10.61□□□□□ -0.71
TOPBP1-209ENST00000513818 ZBTB6Q15916 424 aa10.61□□□□□ -0.71
TOPBP1-209ENST00000513818 NFIL3Q16649 462 aa10.61□□□□□ -0.71
TOPBP1-209ENST00000513818 ZSCAN23Q3MJ62 389 aa10.61□□□□□ -0.71
TOPBP1-209ENST00000513818 DCAF17Q5H9S7 520 aaPredicted RBP10.61□□□□□ -0.71
TOPBP1-209ENST00000513818 SPATA1Q5VX52 437 aa10.61□□□□□ -0.71
TOPBP1-209ENST00000513818 ASTLQ6HA08 431 aaPredicted RBP10.61□□□□□ -0.71
TOPBP1-209ENST00000513818 ZC3H3Q8IXZ2 948 aaKnown RBP10.61□□□□□ -0.71
TOPBP1-209ENST00000513818 DEFB123Q8N688 67 aa10.61□□□□□ -0.71
TOPBP1-209ENST00000513818 CSGALNACT2Q8N6G5 542 aa10.61□□□□□ -0.71
TOPBP1-209ENST00000513818 BEST2Q8NFU1 509 aa10.61□□□□□ -0.71
TOPBP1-209ENST00000513818 AUTS2Q8WXX7 1259 aa10.61□□□□□ -0.71
TOPBP1-209ENST00000513818 MYLIPQ8WY64 445 aa10.61□□□□□ -0.71
TOPBP1-209ENST00000513818 IGSF21Q96ID5 467 aa10.61□□□□□ -0.71
TOPBP1-209ENST00000513818 CGRRF1Q99675 332 aa10.61□□□□□ -0.71
TOPBP1-209ENST00000513818 GTPBP4Q9BZE4 634 aaKnown RBP10.61□□□□□ -0.71
TOPBP1-209ENST00000513818 ASB7Q9H672 318 aa10.61□□□□□ -0.71
TOPBP1-209ENST00000513818 KIAA1586Q9HCI6 787 aa10.61□□□□□ -0.71
TOPBP1-209ENST00000513818 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.61□□□□□ -0.71
TOPBP1-209ENST00000513818 AAASQ9NRG9 546 aa10.61□□□□□ -0.71
TOPBP1-209ENST00000513818 SLC38A7Q9NVC3 462 aa10.61□□□□□ -0.71
TOPBP1-209ENST00000513818 SPG21Q9NZD8 308 aa10.61□□□□□ -0.71
TOPBP1-209ENST00000513818 RWDD2AQ9UIY3 292 aa10.61□□□□□ -0.71
TOPBP1-209ENST00000513818 FRMD4BQ9Y2L6 1034 aa10.61□□□□□ -0.71
TOPBP1-209ENST00000513818 FAN1Q9Y2M0 1017 aa10.61□□□□□ -0.71
TOPBP1-209ENST00000513818 PCDHB12Q9Y5F1 795 aa10.61□□□□□ -0.71
TOPBP1-209ENST00000513818 TSC2P49815 1807 aa10.61□□□□□ -0.71
TOPBP1-209ENST00000513818 VWA8A3KMH1 1905 aa10.6□□□□□ -0.71
TOPBP1-209ENST00000513818 TMEM265A0A087WTH1 108 aa10.6□□□□□ -0.71
TOPBP1-209ENST00000513818 BICDL2A1A5D9 508 aa10.6□□□□□ -0.71
TOPBP1-209ENST00000513818 C5orf67F2Z3F1 127 aa10.6□□□□□ -0.71
TOPBP1-209ENST00000513818 LPXNO60711 386 aa10.6□□□□□ -0.71
TOPBP1-209ENST00000513818 ALDH2P05091 517 aa10.6□□□□□ -0.71
TOPBP1-209ENST00000513818 ITGB3P05106 788 aa10.6□□□□□ -0.71
TOPBP1-209ENST00000513818 TNNI1P19237 187 aa10.6□□□□□ -0.71
TOPBP1-209ENST00000513818 RPL13P26373 211 aaKnown RBP10.6□□□□□ -0.71
TOPBP1-209ENST00000513818 POLR2BP30876 1174 aaKnown RBP10.6□□□□□ -0.71
TOPBP1-209ENST00000513818 CA8P35219 290 aa10.6□□□□□ -0.71
TOPBP1-209ENST00000513818 IRS1P35568 1242 aa10.6□□□□□ -0.71
TOPBP1-209ENST00000513818 PSMC2P35998 433 aaKnown RBP10.6□□□□□ -0.71
TOPBP1-209ENST00000513818 FKBP3Q00688 224 aaKnown RBP10.6□□□□□ -0.71
TOPBP1-209ENST00000513818 ADGRE1Q14246 886 aa10.6□□□□□ -0.71
TOPBP1-209ENST00000513818 MYBPC2Q14324 1141 aa10.6□□□□□ -0.71
TOPBP1-209ENST00000513818 UPP1Q16831 310 aa10.6□□□□□ -0.71
TOPBP1-209ENST00000513818 CCDC40Q4G0X9 1142 aa10.6□□□□□ -0.71
TOPBP1-209ENST00000513818 ANO6Q4KMQ2 910 aa10.6□□□□□ -0.71
TOPBP1-209ENST00000513818 C1orf220Q5T0J3 134 aa10.6□□□□□ -0.71
TOPBP1-209ENST00000513818 CD300LGQ6UXG3 332 aa10.6□□□□□ -0.71
TOPBP1-209ENST00000513818 TAS1R1Q7RTX1 841 aa10.6□□□□□ -0.71
TOPBP1-209ENST00000513818 MICALL1Q8N3F8 863 aa10.6□□□□□ -0.71
TOPBP1-209ENST00000513818 C1orf127Q8N9H9 656 aa10.6□□□□□ -0.71
TOPBP1-209ENST00000513818 POF1BQ8WVV4 589 aa10.6□□□□□ -0.71
TOPBP1-209ENST00000513818 ZNF516Q92618 1163 aa10.6□□□□□ -0.71
TOPBP1-209ENST00000513818 TMEM169Q96HH4 297 aa10.6□□□□□ -0.71
TOPBP1-209ENST00000513818 MFSD14AQ96MC6 490 aa10.6□□□□□ -0.71
TOPBP1-209ENST00000513818 GUCD1Q96NT3 240 aa10.6□□□□□ -0.71
TOPBP1-209ENST00000513818 SAMD11Q96NU1 681 aa10.6□□□□□ -0.71
TOPBP1-209ENST00000513818 FNBP1Q96RU3 617 aa10.6□□□□□ -0.71
TOPBP1-209ENST00000513818 FUCA2Q9BTY2 467 aa10.6□□□□□ -0.71
TOPBP1-209ENST00000513818 C11orf84Q9BUA3 381 aaPredicted RBP10.6□□□□□ -0.71
TOPBP1-209ENST00000513818 SRRTQ9BXP5 876 aaKnown RBP10.6□□□□□ -0.71
TOPBP1-209ENST00000513818 INTS13Q9NVM9 706 aa10.6□□□□□ -0.71
TOPBP1-209ENST00000513818 ANO10Q9NW15 660 aa10.6□□□□□ -0.71
TOPBP1-209ENST00000513818 DPP3Q9NY33 737 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms