RNA–Protein interactions for RNA: ENST00000513514.2

DDR1-273, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 186 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-273ENST00000513514 IFT88Q13099 833 aa8.62□□□□□ -1.03
DDR1-273ENST00000513514 CBLBQ13191 982 aa8.62□□□□□ -1.03
DDR1-273ENST00000513514 SLC29A2Q14542 456 aa8.62□□□□□ -1.03
DDR1-273ENST00000513514 MESDQ14696 234 aa8.62□□□□□ -1.03
DDR1-273ENST00000513514 PSMD6Q15008 389 aa8.62□□□□□ -1.03
DDR1-273ENST00000513514 GNPTABQ3T906 1256 aa8.62□□□□□ -1.03
DDR1-273ENST00000513514 SGO2Q562F6 1265 aa8.62□□□□□ -1.03
DDR1-273ENST00000513514 ANKRD20A8PQ5CZ79 823 aa8.62□□□□□ -1.03
DDR1-273ENST00000513514 C1orf220Q5T0J3 134 aa8.62□□□□□ -1.03
DDR1-273ENST00000513514 RNF187Q5TA31 235 aaPredicted RBP8.62□□□□□ -1.03
DDR1-273ENST00000513514 ANGEL2Q5VTE6 544 aaKnown RBP8.62□□□□□ -1.03
DDR1-273ENST00000513514 PRAMEF18Q5VWM3 479 aa8.62□□□□□ -1.03
DDR1-273ENST00000513514 GJB7Q6PEY0 223 aa8.62□□□□□ -1.03
DDR1-273ENST00000513514 RHBDF2Q6PJF5 856 aa8.62□□□□□ -1.03
DDR1-273ENST00000513514 C15orf39Q6ZRI6 1047 aa8.62□□□□□ -1.03
DDR1-273ENST00000513514 PCGF5Q86SE9 256 aa8.62□□□□□ -1.03
DDR1-273ENST00000513514 DDX42Q86XP3 938 aaKnown RBP eCLIP8.62□□□□□ -1.03
DDR1-273ENST00000513514 PHF13Q86YI8 300 aaPredicted RBP8.62□□□□□ -1.03
DDR1-273ENST00000513514 SULF1Q8IWU6 871 aa8.62□□□□□ -1.03
DDR1-273ENST00000513514 RHOT1Q8IXI2 618 aa8.62□□□□□ -1.03
DDR1-273ENST00000513514 CCDC13Q8IYE1 715 aa8.62□□□□□ -1.03
DDR1-273ENST00000513514 KATNAL2Q8IYT4 538 aa8.62□□□□□ -1.03
DDR1-273ENST00000513514 RCOR2Q8IZ40 523 aa8.62□□□□□ -1.03
DDR1-273ENST00000513514 PPM1KQ8N3J5 372 aa8.62□□□□□ -1.03
DDR1-273ENST00000513514 BANK1Q8NDB2 785 aa8.62□□□□□ -1.03
DDR1-273ENST00000513514 EXD1Q8NHP7 514 aa8.62□□□□□ -1.03
DDR1-273ENST00000513514 SYTL5Q8TDW5 730 aaPredicted RBP8.62□□□□□ -1.03
DDR1-273ENST00000513514 PSPC1Q8WXF1 523 aaKnown RBP8.62□□□□□ -1.03
DDR1-273ENST00000513514 DDX1Q92499 740 aaKnown RBP8.62□□□□□ -1.03
DDR1-273ENST00000513514 CCT6BQ92526 530 aa8.62□□□□□ -1.03
DDR1-273ENST00000513514 ZNF653Q96CK0 615 aa8.62□□□□□ -1.03
DDR1-273ENST00000513514 RBM41Q96IZ5 413 aaKnown RBP8.62□□□□□ -1.03
DDR1-273ENST00000513514 TRERF1Q96PN7 1200 aa8.62□□□□□ -1.03
DDR1-273ENST00000513514 NEUROG2Q9H2A3 272 aa8.62□□□□□ -1.03
DDR1-273ENST00000513514 DPH5Q9H2P9 285 aa8.62□□□□□ -1.03
DDR1-273ENST00000513514 EPB41L4BQ9H329 900 aa8.62□□□□□ -1.03
DDR1-273ENST00000513514 TMEM134Q9H6X4 195 aa8.62□□□□□ -1.03
DDR1-273ENST00000513514 SSU72Q9NP77 194 aaKnown RBP8.62□□□□□ -1.03
DDR1-273ENST00000513514 PDLIM7Q9NR12 457 aa8.62□□□□□ -1.03
DDR1-273ENST00000513514 KLC4Q9NSK0 619 aa8.62□□□□□ -1.03
DDR1-273ENST00000513514 BCCIPQ9P287 314 aaKnown RBP eCLIP8.62□□□□□ -1.03
DDR1-273ENST00000513514 RPL26L1Q9UNX3 145 aaKnown RBP8.62□□□□□ -1.03
DDR1-273ENST00000513514 DRG1Q9Y295 367 aaKnown RBP8.62□□□□□ -1.03
DDR1-273ENST00000513514 SAMM50Q9Y512 469 aa8.62□□□□□ -1.03
DDR1-273ENST00000513514 SCN9AQ15858 1988 aa8.62□□□□□ -1.03
DDR1-273ENST00000513514 POLR2AP24928 1970 aaKnown RBP8.61□□□□□ -1.03
DDR1-273ENST00000513514 C19orf81C9J6K1 198 aa8.61□□□□□ -1.03
DDR1-273ENST00000513514 HNRNPCL1O60812 293 aaKnown RBP8.61□□□□□ -1.03
DDR1-273ENST00000513514 CAND2O75155 1236 aa8.61□□□□□ -1.03
DDR1-273ENST00000513514 PROSCO94903 275 aa8.61□□□□□ -1.03
DDR1-273ENST00000513514 CYP1A1P04798 512 aaPredicted RBP8.61□□□□□ -1.03
DDR1-273ENST00000513514 PYGMP11217 842 aa8.61□□□□□ -1.03
DDR1-273ENST00000513514 NSFP46459 744 aaKnown RBP8.61□□□□□ -1.03
DDR1-273ENST00000513514 MNAT1P51948 309 aa8.61□□□□□ -1.03
DDR1-273ENST00000513514 CACNB3P54284 484 aa8.61□□□□□ -1.03
DDR1-273ENST00000513514 PEX3P56589 373 aa8.61□□□□□ -1.03
DDR1-273ENST00000513514 YWHAEP62258 255 aaKnown RBP8.61□□□□□ -1.03
DDR1-273ENST00000513514 ACVR2BQ13705 512 aa8.61□□□□□ -1.03
DDR1-273ENST00000513514 COG2Q14746 738 aa8.61□□□□□ -1.03
DDR1-273ENST00000513514 PGM5Q15124 567 aa8.61□□□□□ -1.03
DDR1-273ENST00000513514 SIX1Q15475 284 aaPredicted RBP8.61□□□□□ -1.03
DDR1-273ENST00000513514 TRADDQ15628 312 aa8.61□□□□□ -1.03
DDR1-273ENST00000513514 PKN2Q16513 984 aaKnown RBP8.61□□□□□ -1.03
DDR1-273ENST00000513514 XKR9Q5GH70 373 aa8.61□□□□□ -1.03
DDR1-273ENST00000513514 XKR3Q5GH77 459 aa8.61□□□□□ -1.03
DDR1-273ENST00000513514 WDR78Q5VTH9 848 aa8.61□□□□□ -1.03
DDR1-273ENST00000513514 DCAF15Q66K64 600 aa8.61□□□□□ -1.03
DDR1-273ENST00000513514 RNF207Q6ZRF8 634 aa8.61□□□□□ -1.03
DDR1-273ENST00000513514 RGS9BPQ6ZS82 235 aa8.61□□□□□ -1.03
DDR1-273ENST00000513514 ANKS1BQ7Z6G8 1248 aa8.61□□□□□ -1.03
DDR1-273ENST00000513514 NOP9Q86U38 636 aaKnown RBP8.61□□□□□ -1.03
DDR1-273ENST00000513514 VSIG10LQ86VR7 867 aa8.61□□□□□ -1.03
DDR1-273ENST00000513514 ARHGEF19Q8IW93 802 aa8.61□□□□□ -1.03
DDR1-273ENST00000513514 MCOLN2Q8IZK6 566 aa8.61□□□□□ -1.03
DDR1-273ENST00000513514 SPICE1Q8N0Z3 855 aa8.61□□□□□ -1.03
DDR1-273ENST00000513514 ACER1Q8TDN7 264 aa8.61□□□□□ -1.03
DDR1-273ENST00000513514 NSUN6Q8TEA1 469 aaKnown RBP8.61□□□□□ -1.03
DDR1-273ENST00000513514 C12orf42Q96LP6 360 aa8.61□□□□□ -1.03
DDR1-273ENST00000513514 CFAP57Q96MR6 1250 aa8.61□□□□□ -1.03
DDR1-273ENST00000513514 KREMEN1Q96MU8 473 aa8.61□□□□□ -1.03
DDR1-273ENST00000513514 FNBP1Q96RU3 617 aa8.61□□□□□ -1.03
DDR1-273ENST00000513514 PDCD2LQ9BRP1 358 aa8.61□□□□□ -1.03
DDR1-273ENST00000513514 CBWD1Q9BRT8 395 aa8.61□□□□□ -1.03
DDR1-273ENST00000513514 CELF4Q9BZC1 486 aaKnown RBP8.61□□□□□ -1.03
DDR1-273ENST00000513514 ATP6V0A4Q9HBG4 840 aa8.61□□□□□ -1.03
DDR1-273ENST00000513514 PXMP2Q9NR77 195 aa8.61□□□□□ -1.03
DDR1-273ENST00000513514 PARVAQ9NVD7 372 aa8.61□□□□□ -1.03
DDR1-273ENST00000513514 HAUS2Q9NVX0 235 aa8.61□□□□□ -1.03
DDR1-273ENST00000513514 GEMIN8Q9NWZ8 242 aaKnown RBP8.61□□□□□ -1.03
DDR1-273ENST00000513514 DDX56Q9NY93 547 aaKnown RBP8.61□□□□□ -1.03
DDR1-273ENST00000513514 ARHGAP28Q9P2N2 729 aa8.61□□□□□ -1.03
DDR1-273ENST00000513514 WRAP73Q9P2S5 460 aaPredicted RBP8.61□□□□□ -1.03
DDR1-273ENST00000513514 CNOT8Q9UFF9 292 aaKnown RBP8.61□□□□□ -1.03
DDR1-273ENST00000513514 IP6K2Q9UHH9 426 aa8.61□□□□□ -1.03
DDR1-273ENST00000513514 COLQQ9Y215 455 aaPredicted RBP8.61□□□□□ -1.03
DDR1-273ENST00000513514 SNX24Q9Y343 169 aa8.61□□□□□ -1.03
DDR1-273ENST00000513514 COL6A3P12111 3177 aa8.61□□□□□ -1.03
DDR1-273ENST00000513514 MYH11P35749 1972 aa8.61□□□□□ -1.03
DDR1-273ENST00000513514 DENND3A2RUS2 1198 aa8.6□□□□□ -1.03
DDR1-273ENST00000513514 FAM196BA6NMK8 535 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms