RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 COLGALT2Q8IYK4 626 aa17.86■□□□□ 0.45
HMGCL-209ENST00000513148 TMEM130Q8N3G9 435 aa17.86■□□□□ 0.45
HMGCL-209ENST00000513148 SPC24Q8NBT2 197 aa17.86■□□□□ 0.45
HMGCL-209ENST00000513148 PAAF1Q9BRP4 392 aa17.86■□□□□ 0.45
HMGCL-209ENST00000513148 PLEKHA5Q9HAU0 1116 aa17.86■□□□□ 0.45
HMGCL-209ENST00000513148 TRANK1O15050 2925 aa17.85■□□□□ 0.45
HMGCL-209ENST00000513148 PPP1R3GB7ZBB8 358 aa17.85■□□□□ 0.45
HMGCL-209ENST00000513148 ADRB2P07550 413 aa17.85■□□□□ 0.45
HMGCL-209ENST00000513148 NFICP08651 508 aa17.85■□□□□ 0.45
HMGCL-209ENST00000513148 PLCB2Q00722 1185 aa17.85■□□□□ 0.45
HMGCL-209ENST00000513148 SOX4Q06945 474 aaPredicted RBP17.85■□□□□ 0.45
HMGCL-209ENST00000513148 DSC1Q08554 894 aa17.85■□□□□ 0.45
HMGCL-209ENST00000513148 TUSC3Q13454 348 aa17.85■□□□□ 0.45
HMGCL-209ENST00000513148 NAB2Q15742 525 aa17.85■□□□□ 0.45
HMGCL-209ENST00000513148 ZCWPW2Q504Y3 356 aa17.85■□□□□ 0.45
HMGCL-209ENST00000513148 JADE1Q6IE81 842 aa17.85■□□□□ 0.45
HMGCL-209ENST00000513148 RBM43Q6ZSC3 357 aaKnown RBP17.85■□□□□ 0.45
HMGCL-209ENST00000513148 NYAP1Q6ZVC0 841 aa17.85■□□□□ 0.45
HMGCL-209ENST00000513148 TMEM173Q86WV6 379 aaPredicted RBP17.85■□□□□ 0.45
HMGCL-209ENST00000513148 BRSK2Q8IWQ3 736 aa17.85■□□□□ 0.45
HMGCL-209ENST00000513148 DEFB123Q8N688 67 aa17.85■□□□□ 0.45
HMGCL-209ENST00000513148 KLHL23Q8NBE8 558 aa17.85■□□□□ 0.45
HMGCL-209ENST00000513148 P2RX5Q93086 422 aa17.85■□□□□ 0.45
HMGCL-209ENST00000513148 C16orf45Q96MC5 204 aaPredicted RBP17.85■□□□□ 0.45
HMGCL-209ENST00000513148 SAMD11Q96NU1 681 aa17.85■□□□□ 0.45
HMGCL-209ENST00000513148 YY1AP1Q9H869 796 aa17.85■□□□□ 0.45
HMGCL-209ENST00000513148 ALG13Q9NP73 1137 aaKnown RBP17.85■□□□□ 0.45
HMGCL-209ENST00000513148 TUBGCP4Q9UGJ1 667 aa17.85■□□□□ 0.45
HMGCL-209ENST00000513148 MYO9BQ13459 2157 aa17.85■□□□□ 0.45
HMGCL-209ENST00000513148 ZNF233A6NK53 670 aa17.84■□□□□ 0.45
HMGCL-209ENST00000513148 F8W810 466 aa17.84■□□□□ 0.45
HMGCL-209ENST00000513148 GALTP07902 379 aa17.84■□□□□ 0.45
HMGCL-209ENST00000513148 KCNE1P15382 129 aa17.84■□□□□ 0.45
HMGCL-209ENST00000513148 ZNF75DP51815 510 aa17.84■□□□□ 0.45
HMGCL-209ENST00000513148 STX17P56962 302 aa17.84■□□□□ 0.45
HMGCL-209ENST00000513148 ANKRD40Q6AI12 368 aa17.84■□□□□ 0.45
HMGCL-209ENST00000513148 NELFBQ8WX92 580 aa17.84■□□□□ 0.45
HMGCL-209ENST00000513148 TSG101Q99816 390 aa17.84■□□□□ 0.45
HMGCL-209ENST00000513148 PDE11AQ9HCR9 933 aa17.84■□□□□ 0.45
HMGCL-209ENST00000513148 NRP1O14786 923 aa17.84■□□□□ 0.45
HMGCL-209ENST00000513148 CASP4P49662 377 aa17.84■□□□□ 0.45
HMGCL-209ENST00000513148 GUCY2FP51841 1108 aa17.84■□□□□ 0.45
HMGCL-209ENST00000513148 TPD52L1Q16890 204 aaPredicted RBP17.84■□□□□ 0.45
HMGCL-209ENST00000513148 DPCR1Q3MIW9 517 aa17.84■□□□□ 0.45
HMGCL-209ENST00000513148 CENPPQ6IPU0 288 aa17.84■□□□□ 0.45
HMGCL-209ENST00000513148 HASPINQ8TF76 798 aa17.84■□□□□ 0.45
HMGCL-209ENST00000513148 DHTKD1Q96HY7 919 aaPredicted RBP17.84■□□□□ 0.45
HMGCL-209ENST00000513148 FAM84AQ96KN4 292 aa17.84■□□□□ 0.45
HMGCL-209ENST00000513148 FBXL18Q96ME1 805 aa17.84■□□□□ 0.45
HMGCL-209ENST00000513148 C11orf84Q9BUA3 381 aaPredicted RBP17.84■□□□□ 0.45
HMGCL-209ENST00000513148 KIAA1586Q9HCI6 787 aa17.84■□□□□ 0.45
HMGCL-209ENST00000513148 FAN1Q9Y2M0 1017 aa17.84■□□□□ 0.45
HMGCL-209ENST00000513148 FGF18O76093 207 aa17.83■□□□□ 0.45
HMGCL-209ENST00000513148 ALDH2P05091 517 aa17.83■□□□□ 0.45
HMGCL-209ENST00000513148 CCNE1P24864 410 aa17.83■□□□□ 0.45
HMGCL-209ENST00000513148 PPP1R2P41236 205 aa17.83■□□□□ 0.45
HMGCL-209ENST00000513148 ADAM9Q13443 819 aa17.83■□□□□ 0.45
HMGCL-209ENST00000513148 GPM6BQ13491 265 aa17.83■□□□□ 0.45
HMGCL-209ENST00000513148 TMEM132DQ14C87 1099 aa17.83■□□□□ 0.45
HMGCL-209ENST00000513148 LMBRD2Q68DH5 695 aaPredicted RBP17.83■□□□□ 0.45
HMGCL-209ENST00000513148 GPR153Q6NV75 609 aa17.83■□□□□ 0.45
HMGCL-209ENST00000513148 SLC9A9Q8IVB4 645 aa17.83■□□□□ 0.45
HMGCL-209ENST00000513148 BCL7CQ8WUZ0 217 aaPredicted RBP17.83■□□□□ 0.45
HMGCL-209ENST00000513148 CCDC127Q96BQ5 260 aa17.83■□□□□ 0.45
HMGCL-209ENST00000513148 ASB7Q9H672 318 aa17.83■□□□□ 0.45
HMGCL-209ENST00000513148 SLC38A7Q9NVC3 462 aa17.83■□□□□ 0.45
HMGCL-209ENST00000513148 DMAC2Q9NW81 257 aa17.83■□□□□ 0.45
HMGCL-209ENST00000513148 C5orf67F2Z3F1 127 aa17.82■□□□□ 0.44
HMGCL-209ENST00000513148 ATP8B1O43520 1251 aa17.82■□□□□ 0.44
HMGCL-209ENST00000513148 IL18RAPO95256 599 aa17.82■□□□□ 0.44
HMGCL-209ENST00000513148 ITGB1P05556 798 aa17.82■□□□□ 0.44
HMGCL-209ENST00000513148 CLCNKBP51801 687 aa17.82■□□□□ 0.44
HMGCL-209ENST00000513148 PAK1Q13153 545 aa17.82■□□□□ 0.44
HMGCL-209ENST00000513148 EDRF1Q3B7T1 1238 aa17.82■□□□□ 0.44
HMGCL-209ENST00000513148 SARM1Q6SZW1 724 aa17.82■□□□□ 0.44
HMGCL-209ENST00000513148 CD302Q8IX05 232 aa17.82■□□□□ 0.44
HMGCL-209ENST00000513148 EFCAB13Q8IY85 973 aa17.82■□□□□ 0.44
HMGCL-209ENST00000513148 SLC39A11Q8N1S5 342 aa17.82■□□□□ 0.44
HMGCL-209ENST00000513148 TMEM175Q9BSA9 504 aa17.82■□□□□ 0.44
HMGCL-209ENST00000513148 PLVAPQ9BX97 442 aa17.82■□□□□ 0.44
HMGCL-209ENST00000513148 SPG21Q9NZD8 308 aa17.82■□□□□ 0.44
HMGCL-209ENST00000513148 FRMD4BQ9Y2L6 1034 aa17.82■□□□□ 0.44
HMGCL-209ENST00000513148 DLATP10515 647 aaKnown RBP17.82■□□□□ 0.44
HMGCL-209ENST00000513148 RPL13P26373 211 aaKnown RBP17.82■□□□□ 0.44
HMGCL-209ENST00000513148 PPM1AP35813 382 aa17.82■□□□□ 0.44
HMGCL-209ENST00000513148 NLRP12P59046 1061 aa17.82■□□□□ 0.44
HMGCL-209ENST00000513148 TFAMQ00059 246 aaKnown RBP17.82■□□□□ 0.44
HMGCL-209ENST00000513148 TYRO3Q06418 890 aa17.82■□□□□ 0.44
HMGCL-209ENST00000513148 CYP24A1Q07973 514 aa17.82■□□□□ 0.44
HMGCL-209ENST00000513148 TMEM169Q96HH4 297 aa17.82■□□□□ 0.44
HMGCL-209ENST00000513148 UBQLN1Q9UMX0 589 aaKnown RBP17.82■□□□□ 0.44
HMGCL-209ENST00000513148 H3BNC9 293 aa17.81■□□□□ 0.44
HMGCL-209ENST00000513148 SLU7O95391 586 aaKnown RBP17.81■□□□□ 0.44
HMGCL-209ENST00000513148 RB1P06400 928 aa17.81■□□□□ 0.44
HMGCL-209ENST00000513148 H2AFXP16104 143 aaPredicted RBP17.81■□□□□ 0.44
HMGCL-209ENST00000513148 LRRC63Q05C16 580 aa17.81■□□□□ 0.44
HMGCL-209ENST00000513148 MLKLQ8NB16 471 aa17.81■□□□□ 0.44
HMGCL-209ENST00000513148 IGSF21Q96ID5 467 aa17.81■□□□□ 0.44
HMGCL-209ENST00000513148 MARCH5Q9NX47 278 aa17.81■□□□□ 0.44
HMGCL-209ENST00000513148 EYSQ5T1H1 3165 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms