RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 ZNF169Q14929 603 aaPredicted RBP3.18□□□□□ -1.9
PDGFC-208ENST00000512711 RD3Q7Z3Z2 195 aa3.18□□□□□ -1.9
PDGFC-208ENST00000512711 DCBLD1Q8N8Z6 715 aa3.18□□□□□ -1.9
PDGFC-208ENST00000512711 FUBP1Q96AE4 644 aaKnown RBP3.18□□□□□ -1.9
PDGFC-208ENST00000512711 PTCD3Q96EY7 689 aaKnown RBP3.18□□□□□ -1.9
PDGFC-208ENST00000512711 LRFN3Q9BTN0 628 aa3.18□□□□□ -1.9
PDGFC-208ENST00000512711 SLKQ9H2G2 1235 aaPredicted RBP3.18□□□□□ -1.9
PDGFC-208ENST00000512711 ZNF277Q9NRM2 450 aaPredicted RBP3.18□□□□□ -1.9
PDGFC-208ENST00000512711 LANCL2Q9NS86 450 aa3.18□□□□□ -1.9
PDGFC-208ENST00000512711 MOCS1Q9NZB8 636 aa3.18□□□□□ -1.9
PDGFC-208ENST00000512711 FOXJ2Q9P0K8 574 aa3.18□□□□□ -1.9
PDGFC-208ENST00000512711 TESQ9UGI8 421 aaKnown RBP3.18□□□□□ -1.9
PDGFC-208ENST00000512711 PCDHA13Q9Y5I0 950 aa3.18□□□□□ -1.9
PDGFC-208ENST00000512711 NOX1Q9Y5S8 564 aa3.18□□□□□ -1.9
PDGFC-208ENST00000512711 GPR45Q9Y5Y3 372 aa3.18□□□□□ -1.9
PDGFC-208ENST00000512711 COX11Q9Y6N1 276 aa3.18□□□□□ -1.9
PDGFC-208ENST00000512711 CDHR4A6H8M9 788 aa3.17□□□□□ -1.9
PDGFC-208ENST00000512711 LRRC3CA6NJW4 275 aa3.17□□□□□ -1.9
PDGFC-208ENST00000512711 KIAA0391O15091 583 aaKnown RBP3.17□□□□□ -1.9
PDGFC-208ENST00000512711 PCDHGA12O60330 932 aa3.17□□□□□ -1.9
PDGFC-208ENST00000512711 GPR32O75388 356 aa3.17□□□□□ -1.9
PDGFC-208ENST00000512711 C1QL1O75973 258 aa3.17□□□□□ -1.9
PDGFC-208ENST00000512711 MATN4O95460 622 aa3.17□□□□□ -1.9
PDGFC-208ENST00000512711 FBLP22087 321 aaKnown RBP3.17□□□□□ -1.9
PDGFC-208ENST00000512711 FDXRP22570 491 aa3.17□□□□□ -1.9
PDGFC-208ENST00000512711 CNGA1P29973 690 aa3.17□□□□□ -1.9
PDGFC-208ENST00000512711 MRPS21P82921 87 aaKnown RBP3.17□□□□□ -1.9
PDGFC-208ENST00000512711 SLFN5Q08AF3 891 aa3.17□□□□□ -1.9
PDGFC-208ENST00000512711 TARDBPQ13148 414 aaKnown RBP eCLIP3.17□□□□□ -1.9
PDGFC-208ENST00000512711 INAVAQ3KP66 663 aa3.17□□□□□ -1.9
PDGFC-208ENST00000512711 SPDYE7PQ495Y7 208 aa3.17□□□□□ -1.9
PDGFC-208ENST00000512711 FAM180AQ6UWF9 173 aa3.17□□□□□ -1.9
PDGFC-208ENST00000512711 Q6ZNX1 250 aa3.17□□□□□ -1.9
PDGFC-208ENST00000512711 DDX42Q86XP3 938 aaKnown RBP eCLIP3.17□□□□□ -1.9
PDGFC-208ENST00000512711 RHOT1Q8IXI2 618 aa3.17□□□□□ -1.9
PDGFC-208ENST00000512711 CBARPQ8N350 705 aaPredicted RBP3.17□□□□□ -1.9
PDGFC-208ENST00000512711 ATL2Q8NHH9 583 aa3.17□□□□□ -1.9
PDGFC-208ENST00000512711 TBC1D15Q8TC07 691 aa3.17□□□□□ -1.9
PDGFC-208ENST00000512711 CASKIN2Q8WXE0 1202 aa3.17□□□□□ -1.9
PDGFC-208ENST00000512711 JADE3Q92613 823 aa3.17□□□□□ -1.9
PDGFC-208ENST00000512711 LRIG1Q96JA1 1093 aa3.17□□□□□ -1.9
PDGFC-208ENST00000512711 AIFM2Q9BRQ8 373 aa3.17□□□□□ -1.9
PDGFC-208ENST00000512711 TLR10Q9BXR5 811 aa3.17□□□□□ -1.9
PDGFC-208ENST00000512711 RNPEPQ9H4A4 650 aa3.17□□□□□ -1.9
PDGFC-208ENST00000512711 GALNT9Q9HCQ5 603 aa3.17□□□□□ -1.9
PDGFC-208ENST00000512711 CASS4Q9NQ75 786 aa3.17□□□□□ -1.9
PDGFC-208ENST00000512711 IL17RBQ9NRM6 502 aa3.17□□□□□ -1.9
PDGFC-208ENST00000512711 TMEM140Q9NV12 185 aa3.17□□□□□ -1.9
PDGFC-208ENST00000512711 TUBD1Q9UJT1 453 aa3.17□□□□□ -1.9
PDGFC-208ENST00000512711 TMA7Q9Y2S6 64 aaKnown RBP3.17□□□□□ -1.9
PDGFC-208ENST00000512711 INSL6Q9Y581 213 aa3.17□□□□□ -1.9
PDGFC-208ENST00000512711 PCDHGA9Q9Y5G4 932 aaKnown RBP3.17□□□□□ -1.9
PDGFC-208ENST00000512711 PCDHGA8Q9Y5G5 932 aa3.17□□□□□ -1.9
PDGFC-208ENST00000512711 PCDHGA7Q9Y5G6 932 aa3.17□□□□□ -1.9
PDGFC-208ENST00000512711 PCDHGA6Q9Y5G7 932 aa3.17□□□□□ -1.9
PDGFC-208ENST00000512711 PCDHGA3Q9Y5H0 932 aa3.17□□□□□ -1.9
PDGFC-208ENST00000512711 SPATA31A6Q5VVP1 1343 aa3.17□□□□□ -1.9
PDGFC-208ENST00000512711 K7ESF4 209 aa3.16□□□□□ -1.9
PDGFC-208ENST00000512711 ENDOD1O94919 500 aa3.16□□□□□ -1.9
PDGFC-208ENST00000512711 IGLV2-14P01704 120 aa3.16□□□□□ -1.9
PDGFC-208ENST00000512711 FCER1AP12319 257 aa3.16□□□□□ -1.9
PDGFC-208ENST00000512711 GATA3P23771 443 aa3.16□□□□□ -1.9
PDGFC-208ENST00000512711 EDNRBP24530 442 aa3.16□□□□□ -1.9
PDGFC-208ENST00000512711 SLC5A3P53794 718 aa3.16□□□□□ -1.9
PDGFC-208ENST00000512711 ZNF280AP59817 542 aaPredicted RBP3.16□□□□□ -1.9
PDGFC-208ENST00000512711 FAPQ12884 760 aa3.16□□□□□ -1.9
PDGFC-208ENST00000512711 KLF1Q13351 362 aaPredicted RBP3.16□□□□□ -1.9
PDGFC-208ENST00000512711 IL10RAQ13651 578 aa3.16□□□□□ -1.9
PDGFC-208ENST00000512711 CLUL1Q15846 466 aa3.16□□□□□ -1.9
PDGFC-208ENST00000512711 GEN1Q17RS7 908 aa3.16□□□□□ -1.9
PDGFC-208ENST00000512711 FLYWCH1Q4VC44 716 aa3.16□□□□□ -1.9
PDGFC-208ENST00000512711 TAF7LQ5H9L4 462 aa3.16□□□□□ -1.9
PDGFC-208ENST00000512711 RNF219Q5W0B1 726 aaPredicted RBP3.16□□□□□ -1.9
PDGFC-208ENST00000512711 EGFLAMQ63HQ2 1017 aa3.16□□□□□ -1.9
PDGFC-208ENST00000512711 PGM2L1Q6PCE3 622 aa3.16□□□□□ -1.9
PDGFC-208ENST00000512711 TSHZ1Q6ZSZ6 1077 aa3.16□□□□□ -1.9
PDGFC-208ENST00000512711 SPATS2Q86XZ4 545 aaKnown RBP3.16□□□□□ -1.9
PDGFC-208ENST00000512711 DRC7Q8IY82 874 aa3.16□□□□□ -1.9
PDGFC-208ENST00000512711 FAM43AQ8N2R8 423 aa3.16□□□□□ -1.9
PDGFC-208ENST00000512711 FITM2Q8N6M3 262 aa3.16□□□□□ -1.9
PDGFC-208ENST00000512711 CNTD1Q8N815 330 aa3.16□□□□□ -1.9
PDGFC-208ENST00000512711 BOLLQ8N9W6 283 aaKnown RBP3.16□□□□□ -1.9
PDGFC-208ENST00000512711 NSUN7Q8NE18 718 aaKnown RBP3.16□□□□□ -1.9
PDGFC-208ENST00000512711 CYFIP2Q96F07 1278 aa3.16□□□□□ -1.9
PDGFC-208ENST00000512711 DMRTA2Q96SC8 542 aa3.16□□□□□ -1.9
PDGFC-208ENST00000512711 CCDC8Q9H0W5 538 aaPredicted RBP3.16□□□□□ -1.9
PDGFC-208ENST00000512711 ZBTB21Q9ULJ3 1066 aa3.16□□□□□ -1.9
PDGFC-208ENST00000512711 SLC45A2Q9UMX9 530 aa3.16□□□□□ -1.9
PDGFC-208ENST00000512711 LIMCH1Q9UPQ0 1083 aa3.16□□□□□ -1.9
PDGFC-208ENST00000512711 MTO1Q9Y2Z2 717 aaKnown RBP3.16□□□□□ -1.9
PDGFC-208ENST00000512711 KAT6AQ92794 2004 aa3.15□□□□□ -1.9
PDGFC-208ENST00000512711 MYADML2A6NDP7 307 aa3.15□□□□□ -1.91
PDGFC-208ENST00000512711 ELFN1P0C7U0 828 aa3.15□□□□□ -1.91
PDGFC-208ENST00000512711 C5AR1P21730 350 aa3.15□□□□□ -1.91
PDGFC-208ENST00000512711 IARSP41252 1262 aaKnown RBP3.15□□□□□ -1.91
PDGFC-208ENST00000512711 VAV2P52735 878 aa3.15□□□□□ -1.91
PDGFC-208ENST00000512711 ATXN1P54253 815 aaKnown RBP3.15□□□□□ -1.91
PDGFC-208ENST00000512711 DACT2Q5SW24 774 aa3.15□□□□□ -1.91
PDGFC-208ENST00000512711 UTP14CQ5TAP6 766 aaKnown RBP3.15□□□□□ -1.91
PDGFC-208ENST00000512711 ARHGEF25Q86VW2 580 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms