RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 ADAM20O43506 726 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 HSPA1AP0DMV8 641 aaKnown RBP6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 HSPA1BP0DMV9 641 aaKnown RBP6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 IFNAR1P17181 557 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 ITPKAP23677 461 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 TNFRSF8P28908 595 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 TAGLN2P37802 199 aaKnown RBP6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 CPA2P48052 419 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 ADKP55263 362 aaKnown RBP6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 NR5A1Q13285 461 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 PRPF4BQ13523 1007 aaKnown RBP6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 CUL2Q13617 745 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 GRIK5Q16478 980 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 TOR2AQ5JU69 321 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 ADGRA1Q86SQ6 560 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 ANKLE2Q86XL3 938 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 TRIM59Q8IWR1 403 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 TTC39CQ8N584 583 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 CELF5Q8N6W0 485 aaKnown RBP6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 LINC00469Q8N7U9 141 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 HSPH1Q92598 858 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 SGCDQ92629 289 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 BICD1Q96G01 975 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 FAM84AQ96KN4 292 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 NLRP4Q96MN2 994 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 MPHOSPH9Q99550 1183 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 FTOQ9C0B1 505 aaKnown RBP eCLIP6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 FHDC1Q9C0D6 1143 aaPredicted RBP6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 TNMDQ9H2S6 317 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 ST6GALNAC4Q9H4F1 302 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 CBX8Q9HC52 389 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 ADPRHL2Q9NX46 363 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 ACTR3BQ9P1U1 418 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 MAP3K4Q9Y6R4 1608 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 A4D1N5 150 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 CTAGE9A4FU28 777 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 SYT5O00445 386 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 CEP104O60308 925 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 CKMP06732 381 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 HSD17B2P37059 387 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 GRM5P41594 1212 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 MAGEA8P43361 318 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 FOXO1Q12778 655 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 ADAM9Q13443 819 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 INPP5AQ14642 412 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 ZNF827Q17R98 1081 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 FSTL4Q6MZW2 842 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 RUFY3Q7L099 469 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 GPR150Q8NGU9 434 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 ZFAND2BQ8WV99 257 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 GPR63Q9BZJ6 419 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 NRIP3Q9NQ35 241 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 EIF2B3Q9NR50 452 aaKnown RBP6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 MBIPQ9NS73 344 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 CPNE7Q9UBL6 633 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 ASB3Q9Y575 518 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 PZPP20742 1482 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 RTEL1-TNFRSF6BF6WH68 1400 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 SCAPERQ9BY12 1400 aa6.8□□□□□ -1.32
TRAPPC11-209ENST00000512476 ZFYVE16Q7Z3T8 1539 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 CHURC1-FNTBB4DL54 471 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 SGK1O00141 431 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 VWA5AO00534 786 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 TNFRSF10CO14798 259 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 REC8O95072 547 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 NDST3O95803 873 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 FTCDO95954 541 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 EDN3P14138 238 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 CAPN2P17655 700 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 SLC9A1P19634 815 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 PSEN2P49810 448 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 FAM189BP81408 668 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 TRDNQ13061 729 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 NEDD9Q14511 834 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 ALG11Q2TAA5 492 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 INTS3Q68E01 1043 aaKnown RBP6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 TMEM154Q6P9G4 183 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 SUSD1Q6UWL2 747 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 DDX53Q86TM3 631 aaKnown RBP6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 CDH24Q86UP0 819 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 SCML4Q8N228 414 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 SFRP1Q8N474 314 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 NOC3LQ8WTT2 800 aaKnown RBP6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 AFG1LQ8WV93 481 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 XAGE2Q96GT9 111 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 ACAP3Q96P50 834 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 SIN3AQ96ST3 1273 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 YIPF2Q9BWQ6 316 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 STK33Q9BYT3 514 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 TRIM7Q9C029 511 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 KLHL25Q9H0H3 589 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 WNT5BQ9H1J7 359 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 ZNF576Q9H609 170 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 KRT82Q9NSB4 513 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 INO80Q9ULG1 1556 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 NSD2O96028 1365 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 KDM5DQ9BY66 1539 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 DUOX2Q9NRD8 1548 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 RNF123Q5XPI4 1314 aa6.79□□□□□ -1.32
TRAPPC11-209ENST00000512476 A0A0G2JPF8 293 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms