RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 SLC9A2Q9UBY0 812 aa11.47□□□□□ -0.57
PDLIM5-217ENST00000512274 RAB23Q9ULC3 237 aa11.47□□□□□ -0.57
PDLIM5-217ENST00000512274 PCDHA10Q9Y5I2 948 aa11.47□□□□□ -0.57
PDLIM5-217ENST00000512274 NUMBLQ9Y6R0 609 aa11.47□□□□□ -0.57
PDLIM5-217ENST00000512274 A0A087WWV3 80 aa11.46□□□□□ -0.57
PDLIM5-217ENST00000512274 IGKV6D-21A0A0A0MT36 114 aa11.46□□□□□ -0.57
PDLIM5-217ENST00000512274 GOLGA6L6A8MZA4 724 aa11.46□□□□□ -0.57
PDLIM5-217ENST00000512274 C1QTNF9BB2RNN3 333 aa11.46□□□□□ -0.57
PDLIM5-217ENST00000512274 C2CD2LO14523 706 aa11.46□□□□□ -0.57
PDLIM5-217ENST00000512274 RFPL2O75678 378 aa11.46□□□□□ -0.57
PDLIM5-217ENST00000512274 ZIC2O95409 532 aaPredicted RBP11.46□□□□□ -0.57
PDLIM5-217ENST00000512274 C1QTNF9P0C862 333 aa11.46□□□□□ -0.57
PDLIM5-217ENST00000512274 POLGP54098 1239 aaPredicted RBP11.46□□□□□ -0.57
PDLIM5-217ENST00000512274 STK4Q13043 487 aa11.46□□□□□ -0.57
PDLIM5-217ENST00000512274 FAM26FQ5R3K3 315 aa11.46□□□□□ -0.57
PDLIM5-217ENST00000512274 RINT1Q6NUQ1 792 aa11.46□□□□□ -0.57
PDLIM5-217ENST00000512274 TTI2Q6NXR4 508 aa11.46□□□□□ -0.57
PDLIM5-217ENST00000512274 PRR23BQ6ZRT6 265 aa11.46□□□□□ -0.57
PDLIM5-217ENST00000512274 GPBP1Q86WP2 473 aa11.46□□□□□ -0.57
PDLIM5-217ENST00000512274 ZC3H3Q8IXZ2 948 aaKnown RBP11.46□□□□□ -0.57
PDLIM5-217ENST00000512274 KIAA0895Q8NCT3 520 aa11.46□□□□□ -0.57
PDLIM5-217ENST00000512274 SMG7Q92540 1137 aaKnown RBP11.46□□□□□ -0.57
PDLIM5-217ENST00000512274 DYDC2Q96IM9 177 aa11.46□□□□□ -0.57
PDLIM5-217ENST00000512274 PLIN2Q99541 437 aa11.46□□□□□ -0.57
PDLIM5-217ENST00000512274 VN1R3Q9BXE9 311 aa11.46□□□□□ -0.57
PDLIM5-217ENST00000512274 TRIM5Q9C035 493 aa11.46□□□□□ -0.57
PDLIM5-217ENST00000512274 JPH1Q9HDC5 661 aaPredicted RBP11.46□□□□□ -0.57
PDLIM5-217ENST00000512274 SLC2A4RGQ9NR83 387 aa11.46□□□□□ -0.57
PDLIM5-217ENST00000512274 RGL1Q9NZL6 768 aa11.46□□□□□ -0.57
PDLIM5-217ENST00000512274 LIMA1Q9UHB6 759 aaKnown RBP11.46□□□□□ -0.57
PDLIM5-217ENST00000512274 COL4A3BPQ9Y5P4 624 aa11.46□□□□□ -0.57
PDLIM5-217ENST00000512274 A0A1B0GTH6 734 aa11.45□□□□□ -0.58
PDLIM5-217ENST00000512274 EIF3DO15371 548 aaKnown RBP eCLIP11.45□□□□□ -0.58
PDLIM5-217ENST00000512274 CHMP2AO43633 222 aa11.45□□□□□ -0.58
PDLIM5-217ENST00000512274 GPR32O75388 356 aa11.45□□□□□ -0.58
PDLIM5-217ENST00000512274 CCNE2O96020 404 aa11.45□□□□□ -0.58
PDLIM5-217ENST00000512274 SPATA31D3P0C874 917 aa11.45□□□□□ -0.58
PDLIM5-217ENST00000512274 LAMP2P13473 410 aa11.45□□□□□ -0.58
PDLIM5-217ENST00000512274 FGFR4P22455 802 aa11.45□□□□□ -0.58
PDLIM5-217ENST00000512274 EEF1GP26641 437 aaKnown RBP11.45□□□□□ -0.58
PDLIM5-217ENST00000512274 ACTR2P61160 394 aa11.45□□□□□ -0.58
PDLIM5-217ENST00000512274 FANCCQ00597 558 aa11.45□□□□□ -0.58
PDLIM5-217ENST00000512274 HTR4Q13639 388 aa11.45□□□□□ -0.58
PDLIM5-217ENST00000512274 ALCAMQ13740 583 aa11.45□□□□□ -0.58
PDLIM5-217ENST00000512274 NFIL3Q16649 462 aa11.45□□□□□ -0.58
PDLIM5-217ENST00000512274 ZCWPW2Q504Y3 356 aa11.45□□□□□ -0.58
PDLIM5-217ENST00000512274 IL31Q6EBC2 164 aa11.45□□□□□ -0.58
PDLIM5-217ENST00000512274 ABHD15Q6UXT9 468 aa11.45□□□□□ -0.58
PDLIM5-217ENST00000512274 PRR23CQ6ZRP0 262 aa11.45□□□□□ -0.58
PDLIM5-217ENST00000512274 SPATA31D4Q6ZUB0 917 aa11.45□□□□□ -0.58
PDLIM5-217ENST00000512274 EPM2AIP1Q7L775 607 aaPredicted RBP11.45□□□□□ -0.58
PDLIM5-217ENST00000512274 PLPPR4Q7Z2D5 763 aa11.45□□□□□ -0.58
PDLIM5-217ENST00000512274 APTXQ7Z2E3 356 aaKnown RBP11.45□□□□□ -0.58
PDLIM5-217ENST00000512274 METTL13Q8N6R0 699 aa11.45□□□□□ -0.58
PDLIM5-217ENST00000512274 NELFBQ8WX92 580 aa11.45□□□□□ -0.58
PDLIM5-217ENST00000512274 MRPL9Q9BYD2 267 aaKnown RBP11.45□□□□□ -0.58
PDLIM5-217ENST00000512274 BHMT2Q9H2M3 363 aa11.45□□□□□ -0.58
PDLIM5-217ENST00000512274 ST6GALNAC4Q9H4F1 302 aa11.45□□□□□ -0.58
PDLIM5-217ENST00000512274 NRDE2Q9H7Z3 1164 aa11.45□□□□□ -0.58
PDLIM5-217ENST00000512274 C17orf75Q9HAS0 396 aa11.45□□□□□ -0.58
PDLIM5-217ENST00000512274 PIDD1Q9HB75 910 aa11.45□□□□□ -0.58
PDLIM5-217ENST00000512274 SEMA4GQ9NTN9 838 aa11.45□□□□□ -0.58
PDLIM5-217ENST00000512274 FANCLQ9NW38 375 aa11.45□□□□□ -0.58
PDLIM5-217ENST00000512274 DNAJB4Q9UDY4 337 aa11.45□□□□□ -0.58
PDLIM5-217ENST00000512274 GDAQ9Y2T3 454 aa11.45□□□□□ -0.58
PDLIM5-217ENST00000512274 ATRXP46100 2492 aa11.45□□□□□ -0.58
PDLIM5-217ENST00000512274 DOCK6Q96HP0 2047 aa11.44□□□□□ -0.58
PDLIM5-217ENST00000512274 SOBPA7XYQ1 873 aa11.44□□□□□ -0.58
PDLIM5-217ENST00000512274 HBP1O60381 514 aa11.44□□□□□ -0.58
PDLIM5-217ENST00000512274 FGFR1OPO95684 399 aaKnown RBP11.44□□□□□ -0.58
PDLIM5-217ENST00000512274 PSAPP07602 524 aa11.44□□□□□ -0.58
PDLIM5-217ENST00000512274 GALTP07902 379 aa11.44□□□□□ -0.58
PDLIM5-217ENST00000512274 ABCD1P33897 745 aa11.44□□□□□ -0.58
PDLIM5-217ENST00000512274 RARRES1P49788 294 aa11.44□□□□□ -0.58
PDLIM5-217ENST00000512274 GSDMDP57764 484 aa11.44□□□□□ -0.58
PDLIM5-217ENST00000512274 SHC2P98077 582 aa11.44□□□□□ -0.58
PDLIM5-217ENST00000512274 MLF2Q15773 248 aaPredicted RBP11.44□□□□□ -0.58
PDLIM5-217ENST00000512274 EDRF1Q3B7T1 1238 aa11.44□□□□□ -0.58
PDLIM5-217ENST00000512274 SLC44A4Q53GD3 710 aa11.44□□□□□ -0.58
PDLIM5-217ENST00000512274 LAIR1Q6GTX8 287 aa11.44□□□□□ -0.58
PDLIM5-217ENST00000512274 ISM2Q6H9L7 571 aa11.44□□□□□ -0.58
PDLIM5-217ENST00000512274 FAM43BQ6ZT52 329 aaPredicted RBP11.44□□□□□ -0.58
PDLIM5-217ENST00000512274 FAM114A1Q8IWE2 563 aa11.44□□□□□ -0.58
PDLIM5-217ENST00000512274 CMASQ8NFW8 434 aaPredicted RBP11.44□□□□□ -0.58
PDLIM5-217ENST00000512274 NELL1Q92832 810 aa11.44□□□□□ -0.58
PDLIM5-217ENST00000512274 FGF14Q92915 247 aa11.44□□□□□ -0.58
PDLIM5-217ENST00000512274 LPPQ93052 612 aa11.44□□□□□ -0.58
PDLIM5-217ENST00000512274 REEP2Q9BRK0 252 aa11.44□□□□□ -0.58
PDLIM5-217ENST00000512274 LTB4R2Q9NPC1 389 aa11.44□□□□□ -0.58
PDLIM5-217ENST00000512274 PANK4Q9NVE7 773 aa11.44□□□□□ -0.58
PDLIM5-217ENST00000512274 WRAP73Q9P2S5 460 aaPredicted RBP11.44□□□□□ -0.58
PDLIM5-217ENST00000512274 KCNG1Q9UIX4 513 aa11.44□□□□□ -0.58
PDLIM5-217ENST00000512274 INPP5FQ9Y2H2 1132 aa11.44□□□□□ -0.58
PDLIM5-217ENST00000512274 WDR87Q6ZQQ6 2873 aa11.44□□□□□ -0.58
PDLIM5-217ENST00000512274 CHD6Q8TD26 2715 aa11.44□□□□□ -0.58
PDLIM5-217ENST00000512274 MTCL1Q9Y4B5 1905 aaKnown RBP11.43□□□□□ -0.58
PDLIM5-217ENST00000512274 ANHXE9PGG2 379 aa11.43□□□□□ -0.58
PDLIM5-217ENST00000512274 BACH1O14867 736 aa11.43□□□□□ -0.58
PDLIM5-217ENST00000512274 STBD1O95210 358 aa11.43□□□□□ -0.58
PDLIM5-217ENST00000512274 SLC11A1P49279 550 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms