RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 IRX4P78413 519 aa10.15□□□□□ -0.78
NUP54-211ENST00000512151 SIM1P81133 766 aaPredicted RBP10.15□□□□□ -0.78
NUP54-211ENST00000512151 AMHR2Q16671 573 aa10.15□□□□□ -0.78
NUP54-211ENST00000512151 LARP1BQ659C4 914 aaKnown RBP10.15□□□□□ -0.78
NUP54-211ENST00000512151 CD300LGQ6UXG3 332 aa10.15□□□□□ -0.78
NUP54-211ENST00000512151 RTL10Q7L3V2 364 aa10.15□□□□□ -0.78
NUP54-211ENST00000512151 TEX2Q8IWB9 1127 aa10.15□□□□□ -0.78
NUP54-211ENST00000512151 SLC5A5Q92911 643 aa10.15□□□□□ -0.78
NUP54-211ENST00000512151 MSANTD3Q96H12 275 aa10.15□□□□□ -0.78
NUP54-211ENST00000512151 CRELD1Q96HD1 420 aa10.15□□□□□ -0.78
NUP54-211ENST00000512151 ZFYVE19Q96K21 471 aa10.15□□□□□ -0.78
NUP54-211ENST00000512151 HHIPQ96QV1 700 aa10.15□□□□□ -0.78
NUP54-211ENST00000512151 LRRC2Q9BYS8 371 aa10.15□□□□□ -0.78
NUP54-211ENST00000512151 BMP2KQ9NSY1 1161 aaPredicted RBP10.15□□□□□ -0.78
NUP54-211ENST00000512151 BARHL2Q9NY43 387 aa10.15□□□□□ -0.78
NUP54-211ENST00000512151 GTSE1Q9NYZ3 720 aa10.15□□□□□ -0.78
NUP54-211ENST00000512151 V9GY48 417 aaPredicted RBP10.15□□□□□ -0.78
NUP54-211ENST00000512151 KIF26AQ9ULI4 1882 aaPredicted RBP10.15□□□□□ -0.78
NUP54-211ENST00000512151 HECTD1Q9ULT8 2610 aa10.15□□□□□ -0.78
NUP54-211ENST00000512151 ZNF462Q96JM2 2506 aa10.15□□□□□ -0.79
NUP54-211ENST00000512151 PLXNB3Q9ULL4 1909 aa10.15□□□□□ -0.79
NUP54-211ENST00000512151 PTGESO14684 152 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 CHADO15335 359 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 MEFVO15553 781 aaPredicted RBP10.14□□□□□ -0.79
NUP54-211ENST00000512151 GAS7O60861 476 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 SFNP31947 248 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 TUSC3Q13454 348 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 TEAD2Q15562 447 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 NAB2Q15742 525 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 NOTUMQ6P988 496 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 B3GNT9Q6UX72 402 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.14□□□□□ -0.79
NUP54-211ENST00000512151 MIER3Q7Z3K6 550 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 PIP4P1Q86T03 277 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 RALGPS2Q86X27 583 aaPredicted RBP10.14□□□□□ -0.79
NUP54-211ENST00000512151 MICU3Q86XE3 530 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 SYNPOQ8N3V7 929 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 RNF149Q8NC42 400 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 DDX27Q96GQ7 796 aaKnown RBP10.14□□□□□ -0.79
NUP54-211ENST00000512151 RIT2Q99578 217 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 MKNK1Q9BUB5 465 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 PARP2Q9UGN5 583 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 INVSQ9Y283 1065 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 RAXQ9Y2V3 346 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 CELSR3Q9NYQ7 3312 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 URB1O60287 2271 aaKnown RBP10.14□□□□□ -0.79
NUP54-211ENST00000512151 ZNF197O14709 1029 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 KHNYNO15037 678 aaKnown RBP10.14□□□□□ -0.79
NUP54-211ENST00000512151 B4GALT5O43286 388 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 PSMD10O75832 226 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 ERLIN2O94905 339 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 NPTXRO95502 500 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 LRG1P02750 347 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 PLA2G2AP14555 144 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 ARF4P18085 180 aaPredicted RBP10.14□□□□□ -0.79
NUP54-211ENST00000512151 TKTP29401 623 aaKnown RBP10.14□□□□□ -0.79
NUP54-211ENST00000512151 ROR1Q01973 937 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 TNK2Q07912 1038 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 SPIRE1Q08AE8 756 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 FCHO2Q0JRZ9 810 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 ELF2Q15723 593 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 LRCH2Q5VUJ6 765 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 CASC1Q6TDU7 716 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 PDZD4Q76G19 769 aaPredicted RBP10.14□□□□□ -0.79
NUP54-211ENST00000512151 RAB44Q7Z6P3 723 aaPredicted RBP10.14□□□□□ -0.79
NUP54-211ENST00000512151 SHKBP1Q8TBC3 707 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 PSPC1Q8WXF1 523 aaKnown RBP10.14□□□□□ -0.79
NUP54-211ENST00000512151 CCDC51Q96ER9 411 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 TEKT3Q9BXF9 490 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 DHX33Q9H6R0 707 aaKnown RBP10.14□□□□□ -0.79
NUP54-211ENST00000512151 CEP72Q9P209 647 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 WRAP73Q9P2S5 460 aaPredicted RBP10.14□□□□□ -0.79
NUP54-211ENST00000512151 SLC8A2Q9UPR5 921 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 BACE2Q9Y5Z0 518 aa10.14□□□□□ -0.79
NUP54-211ENST00000512151 GON4LQ3T8J9 2241 aa10.13□□□□□ -0.79
NUP54-211ENST00000512151 THADAQ6YHU6 1953 aa10.13□□□□□ -0.79
NUP54-211ENST00000512151 I3L4J1 428 aa10.13□□□□□ -0.79
NUP54-211ENST00000512151 RHOBTB1O94844 696 aa10.13□□□□□ -0.79
NUP54-211ENST00000512151 ABLIM3O94929 683 aa10.13□□□□□ -0.79
NUP54-211ENST00000512151 MYL4P12829 197 aa10.13□□□□□ -0.79
NUP54-211ENST00000512151 AXLP30530 894 aa10.13□□□□□ -0.79
NUP54-211ENST00000512151 LIFRP42702 1097 aa10.13□□□□□ -0.79
NUP54-211ENST00000512151 PTENP60484 403 aa10.13□□□□□ -0.79
NUP54-211ENST00000512151 MBTD1Q05BQ5 628 aa10.13□□□□□ -0.79
NUP54-211ENST00000512151 C19orf57Q0VDD7 668 aa10.13□□□□□ -0.79
NUP54-211ENST00000512151 STXBP5Q5T5C0 1151 aa10.13□□□□□ -0.79
NUP54-211ENST00000512151 FSTL4Q6MZW2 842 aa10.13□□□□□ -0.79
NUP54-211ENST00000512151 PDXDC1Q6P996 788 aa10.13□□□□□ -0.79
NUP54-211ENST00000512151 C1orf228Q6PIY5 440 aa10.13□□□□□ -0.79
NUP54-211ENST00000512151 FERMT3Q86UX7 667 aa10.13□□□□□ -0.79
NUP54-211ENST00000512151 YAF2Q8IY57 180 aa10.13□□□□□ -0.79
NUP54-211ENST00000512151 RDM1Q8NG50 284 aa10.13□□□□□ -0.79
NUP54-211ENST00000512151 MDM1Q8TC05 714 aa10.13□□□□□ -0.79
NUP54-211ENST00000512151 CHFRQ96EP1 664 aa10.13□□□□□ -0.79
NUP54-211ENST00000512151 MTA3Q9BTC8 594 aa10.13□□□□□ -0.79
NUP54-211ENST00000512151 INSL5Q9Y5Q6 135 aa10.13□□□□□ -0.79
NUP54-211ENST00000512151 SLC12A7Q9Y666 1083 aa10.13□□□□□ -0.79
NUP54-211ENST00000512151 MYO18BQ8IUG5 2567 aa10.12□□□□□ -0.79
NUP54-211ENST00000512151 CFAP46Q8IYW2 2715 aa10.12□□□□□ -0.79
NUP54-211ENST00000512151 ZMYM2Q9UBW7 1377 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms