RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 ARID2Q68CP9 1835 aa12.79□□□□□ -0.36
RNF4-216ENST00000511859 ARNTLO00327 626 aa12.79□□□□□ -0.36
RNF4-216ENST00000511859 PRRG1O14668 218 aa12.79□□□□□ -0.36
RNF4-216ENST00000511859 CHADO15335 359 aa12.79□□□□□ -0.36
RNF4-216ENST00000511859 DGAT1O75907 488 aa12.79□□□□□ -0.36
RNF4-216ENST00000511859 B3GAT3O94766 335 aa12.79□□□□□ -0.36
RNF4-216ENST00000511859 IFNAR1P17181 557 aa12.79□□□□□ -0.36
RNF4-216ENST00000511859 ARL2P36404 184 aa12.79□□□□□ -0.36
RNF4-216ENST00000511859 CAPSQ13938 189 aa12.79□□□□□ -0.36
RNF4-216ENST00000511859 ADCK5Q3MIX3 580 aa12.79□□□□□ -0.36
RNF4-216ENST00000511859 RNF43Q68DV7 783 aa12.79□□□□□ -0.36
RNF4-216ENST00000511859 IQCEQ6IPM2 695 aa12.79□□□□□ -0.36
RNF4-216ENST00000511859 SLC8B1Q6J4K2 584 aa12.79□□□□□ -0.36
RNF4-216ENST00000511859 BLIDQ8IZY5 108 aa12.79□□□□□ -0.36
RNF4-216ENST00000511859 ELMOD1Q8N336 334 aa12.79□□□□□ -0.36
RNF4-216ENST00000511859 LEMD2Q8NC56 503 aa12.79□□□□□ -0.36
RNF4-216ENST00000511859 GAB3Q8WWW8 586 aa12.79□□□□□ -0.36
RNF4-216ENST00000511859 SLC26A6Q9BXS9 759 aa12.79□□□□□ -0.36
RNF4-216ENST00000511859 KCNMB3Q9NPA1 279 aa12.79□□□□□ -0.36
RNF4-216ENST00000511859 VPS45Q9NRW7 570 aa12.79□□□□□ -0.36
RNF4-216ENST00000511859 PRMT7Q9NVM4 692 aaPredicted RBP12.79□□□□□ -0.36
RNF4-216ENST00000511859 GTF3C3Q9Y5Q9 886 aa12.79□□□□□ -0.36
RNF4-216ENST00000511859 NID2Q14112 1375 aa12.79□□□□□ -0.36
RNF4-216ENST00000511859 MYBPHLA2RUH7 354 aa12.78□□□□□ -0.36
RNF4-216ENST00000511859 M0R2N6 131 aa12.78□□□□□ -0.36
RNF4-216ENST00000511859 NRG2O14511 850 aaPredicted RBP12.78□□□□□ -0.36
RNF4-216ENST00000511859 ZBTB39O15060 712 aa12.78□□□□□ -0.36
RNF4-216ENST00000511859 TBX3O15119 743 aa12.78□□□□□ -0.36
RNF4-216ENST00000511859 RPP40O75818 363 aaKnown RBP12.78□□□□□ -0.36
RNF4-216ENST00000511859 GLRA2P23416 452 aa12.78□□□□□ -0.36
RNF4-216ENST00000511859 VIPR2P41587 438 aa12.78□□□□□ -0.36
RNF4-216ENST00000511859 CCR2P41597 374 aa12.78□□□□□ -0.36
RNF4-216ENST00000511859 KPNA1P52294 538 aaPredicted RBP12.78□□□□□ -0.36
RNF4-216ENST00000511859 ROR1Q01973 937 aa12.78□□□□□ -0.36
RNF4-216ENST00000511859 CCDC6Q16204 474 aa12.78□□□□□ -0.36
RNF4-216ENST00000511859 GALNT17Q6IS24 598 aa12.78□□□□□ -0.36
RNF4-216ENST00000511859 RALGPS2Q86X27 583 aaPredicted RBP12.78□□□□□ -0.36
RNF4-216ENST00000511859 YAF2Q8IY57 180 aa12.78□□□□□ -0.36
RNF4-216ENST00000511859 ASAP3Q8TDY4 903 aa12.78□□□□□ -0.36
RNF4-216ENST00000511859 DDX27Q96GQ7 796 aaKnown RBP12.78□□□□□ -0.36
RNF4-216ENST00000511859 ZC3H10Q96K80 434 aaKnown RBP12.78□□□□□ -0.36
RNF4-216ENST00000511859 ZNF512Q96ME7 567 aaPredicted RBP12.78□□□□□ -0.36
RNF4-216ENST00000511859 ZSWIM3Q96MP5 696 aa12.78□□□□□ -0.36
RNF4-216ENST00000511859 UROC1Q96N76 676 aa12.78□□□□□ -0.36
RNF4-216ENST00000511859 CYP4F11Q9HBI6 524 aa12.78□□□□□ -0.36
RNF4-216ENST00000511859 RBM12Q9NTZ6 932 aaKnown RBP12.78□□□□□ -0.36
RNF4-216ENST00000511859 SNTG2Q9NY99 539 aa12.78□□□□□ -0.36
RNF4-216ENST00000511859 RGL1Q9NZL6 768 aa12.78□□□□□ -0.36
RNF4-216ENST00000511859 SRRM3A6NNA2 597 aaPredicted RBP12.77□□□□□ -0.37
RNF4-216ENST00000511859 HEPACAM2A8MVW5 462 aa12.77□□□□□ -0.37
RNF4-216ENST00000511859 SLC37A4O43826 429 aa12.77□□□□□ -0.37
RNF4-216ENST00000511859 AKAP3O75969 853 aa12.77□□□□□ -0.37
RNF4-216ENST00000511859 RECQL4O94761 1208 aa12.77□□□□□ -0.37
RNF4-216ENST00000511859 TKTP29401 623 aaKnown RBP12.77□□□□□ -0.37
RNF4-216ENST00000511859 NOVA1P51513 510 aaKnown RBP12.77□□□□□ -0.37
RNF4-216ENST00000511859 CTTNQ14247 550 aaKnown RBP12.77□□□□□ -0.37
RNF4-216ENST00000511859 FAM187BQ17R55 369 aa12.77□□□□□ -0.37
RNF4-216ENST00000511859 ERICH6BQ5W0A0 696 aa12.77□□□□□ -0.37
RNF4-216ENST00000511859 TPGS2Q68CL5 300 aa12.77□□□□□ -0.37
RNF4-216ENST00000511859 PPP4R3AQ6IN85 833 aa12.77□□□□□ -0.37
RNF4-216ENST00000511859 Q6ZS52 159 aa12.77□□□□□ -0.37
RNF4-216ENST00000511859 Q6ZUG5 572 aa12.77□□□□□ -0.37
RNF4-216ENST00000511859 TPH2Q8IWU9 490 aa12.77□□□□□ -0.37
RNF4-216ENST00000511859 RASEFQ8IZ41 740 aa12.77□□□□□ -0.37
RNF4-216ENST00000511859 FAM177A1Q8N128 213 aaPredicted RBP12.77□□□□□ -0.37
RNF4-216ENST00000511859 FBXL16Q8N461 479 aa12.77□□□□□ -0.37
RNF4-216ENST00000511859 ZSCAN18Q8TBC5 510 aaPredicted RBP12.77□□□□□ -0.37
RNF4-216ENST00000511859 FAM200AQ8TCP9 573 aa12.77□□□□□ -0.37
RNF4-216ENST00000511859 BRF1Q92994 677 aa12.77□□□□□ -0.37
RNF4-216ENST00000511859 COL26A1Q96A83 441 aa12.77□□□□□ -0.37
RNF4-216ENST00000511859 DYDC2Q96IM9 177 aa12.77□□□□□ -0.37
RNF4-216ENST00000511859 TMEM121BQ9BXQ6 578 aaPredicted RBP12.77□□□□□ -0.37
RNF4-216ENST00000511859 ADAM33Q9BZ11 813 aa12.77□□□□□ -0.37
RNF4-216ENST00000511859 ANKEF1Q9NU02 776 aa12.77□□□□□ -0.37
RNF4-216ENST00000511859 MAFFQ9ULX9 164 aa12.77□□□□□ -0.37
RNF4-216ENST00000511859 WASF3Q9UPY6 502 aa12.77□□□□□ -0.37
RNF4-216ENST00000511859 AKAP13Q12802 2813 aa12.76□□□□□ -0.37
RNF4-216ENST00000511859 SMG1Q96Q15 3661 aaKnown RBP12.76□□□□□ -0.37
RNF4-216ENST00000511859 SETXQ7Z333 2677 aaKnown RBP12.76□□□□□ -0.37
RNF4-216ENST00000511859 N4BP3O15049 544 aa12.76□□□□□ -0.37
RNF4-216ENST00000511859 MARCH6O60337 910 aa12.76□□□□□ -0.37
RNF4-216ENST00000511859 SLITRK3O94933 977 aa12.76□□□□□ -0.37
RNF4-216ENST00000511859 CCDC192P0DO97 292 aa12.76□□□□□ -0.37
RNF4-216ENST00000511859 GCFC2P16383 781 aaKnown RBP12.76□□□□□ -0.37
RNF4-216ENST00000511859 CLCNKBP51801 687 aa12.76□□□□□ -0.37
RNF4-216ENST00000511859 EPHA5P54756 1037 aa12.76□□□□□ -0.37
RNF4-216ENST00000511859 FCHO2Q0JRZ9 810 aa12.76□□□□□ -0.37
RNF4-216ENST00000511859 FOXC1Q12948 553 aa12.76□□□□□ -0.37
RNF4-216ENST00000511859 CCINQ13939 588 aa12.76□□□□□ -0.37
RNF4-216ENST00000511859 UPP1Q16831 310 aa12.76□□□□□ -0.37
RNF4-216ENST00000511859 INF2Q27J81 1249 aa12.76□□□□□ -0.37
RNF4-216ENST00000511859 DAB2IPQ5VWQ8 1189 aa12.76□□□□□ -0.37
RNF4-216ENST00000511859 KRT25Q7Z3Z0 450 aa12.76□□□□□ -0.37
RNF4-216ENST00000511859 KBTBD6Q86V97 674 aa12.76□□□□□ -0.37
RNF4-216ENST00000511859 TRIM22Q8IYM9 498 aa12.76□□□□□ -0.37
RNF4-216ENST00000511859 DAGLBQ8NCG7 672 aa12.76□□□□□ -0.37
RNF4-216ENST00000511859 ADPGKQ9BRR6 497 aa12.76□□□□□ -0.37
RNF4-216ENST00000511859 FZD8Q9H461 694 aa12.76□□□□□ -0.37
RNF4-216ENST00000511859 C2orf42Q9NWW7 574 aa12.76□□□□□ -0.37
RNF4-216ENST00000511859 INSL5Q9Y5Q6 135 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms