RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 CHMP4BP1P59074 171 aa9.84□□□□□ -0.83
NR1I3-228ENST00000511676 ERVK-21P61565 698 aa9.84□□□□□ -0.83
NR1I3-228ENST00000511676 TAP1Q03518 808 aa9.84□□□□□ -0.83
NR1I3-228ENST00000511676 LRMPQ12912 555 aa9.84□□□□□ -0.83
NR1I3-228ENST00000511676 ADGRE1Q14246 886 aa9.84□□□□□ -0.83
NR1I3-228ENST00000511676 ZNF568Q3ZCX4 644 aa9.84□□□□□ -0.83
NR1I3-228ENST00000511676 ZACNQ401N2 412 aa9.84□□□□□ -0.83
NR1I3-228ENST00000511676 C1orf220Q5T0J3 134 aa9.84□□□□□ -0.83
NR1I3-228ENST00000511676 KLHDC7AQ5VTJ3 777 aa9.84□□□□□ -0.83
NR1I3-228ENST00000511676 DPY19L2P1Q6NXN4 242 aa9.84□□□□□ -0.83
NR1I3-228ENST00000511676 PDXDC1Q6P996 788 aa9.84□□□□□ -0.83
NR1I3-228ENST00000511676 CRELD2Q6UXH1 353 aaPredicted RBP9.84□□□□□ -0.83
NR1I3-228ENST00000511676 C15orf39Q6ZRI6 1047 aa9.84□□□□□ -0.83
NR1I3-228ENST00000511676 WDR49Q8IV35 697 aa9.84□□□□□ -0.83
NR1I3-228ENST00000511676 USP38Q8NB14 1042 aa9.84□□□□□ -0.83
NR1I3-228ENST00000511676 FBXL13Q8NEE6 735 aa9.84□□□□□ -0.83
NR1I3-228ENST00000511676 SCLT1Q96NL6 688 aa9.84□□□□□ -0.83
NR1I3-228ENST00000511676 FNBP1Q96RU3 617 aa9.84□□□□□ -0.83
NR1I3-228ENST00000511676 CGRRF1Q99675 332 aa9.84□□□□□ -0.83
NR1I3-228ENST00000511676 FAM213AQ9BRX8 229 aa9.84□□□□□ -0.83
NR1I3-228ENST00000511676 LSM14BQ9BX40 385 aaKnown RBP9.84□□□□□ -0.83
NR1I3-228ENST00000511676 IRF2BPLQ9H1B7 796 aa9.84□□□□□ -0.83
NR1I3-228ENST00000511676 IKZF4Q9H2S9 585 aa9.84□□□□□ -0.83
NR1I3-228ENST00000511676 ASB7Q9H672 318 aa9.84□□□□□ -0.83
NR1I3-228ENST00000511676 FAM207AQ9NSI2 230 aaPredicted RBP9.84□□□□□ -0.83
NR1I3-228ENST00000511676 HDAC6Q9UBN7 1215 aa9.84□□□□□ -0.83
NR1I3-228ENST00000511676 APEX2Q9UBZ4 518 aa9.84□□□□□ -0.83
NR1I3-228ENST00000511676 CPSF3Q9UKF6 684 aaKnown RBP9.84□□□□□ -0.83
NR1I3-228ENST00000511676 NCOR1O75376 2440 aa9.84□□□□□ -0.83
NR1I3-228ENST00000511676 LRRIQ3A6PVS8 624 aaPredicted RBP9.83□□□□□ -0.84
NR1I3-228ENST00000511676 TSPAN1O60635 241 aa9.83□□□□□ -0.84
NR1I3-228ENST00000511676 VTNP04004 478 aa9.83□□□□□ -0.84
NR1I3-228ENST00000511676 CKBP12277 381 aa9.83□□□□□ -0.84
NR1I3-228ENST00000511676 CLCN1P35523 988 aa9.83□□□□□ -0.84
NR1I3-228ENST00000511676 CYLC1P35663 651 aaPredicted RBP9.83□□□□□ -0.84
NR1I3-228ENST00000511676 GRM5P41594 1212 aa9.83□□□□□ -0.84
NR1I3-228ENST00000511676 PRKCIP41743 596 aa9.83□□□□□ -0.84
NR1I3-228ENST00000511676 PPP3CAQ08209 521 aa9.83□□□□□ -0.84
NR1I3-228ENST00000511676 CBWD6Q4V339 395 aa9.83□□□□□ -0.84
NR1I3-228ENST00000511676 CBWD3Q5JTY5 395 aa9.83□□□□□ -0.84
NR1I3-228ENST00000511676 CBWD5Q5RIA9 395 aa9.83□□□□□ -0.84
NR1I3-228ENST00000511676 NOTUMQ6P988 496 aa9.83□□□□□ -0.84
NR1I3-228ENST00000511676 SLC27A1Q6PCB7 646 aa9.83□□□□□ -0.84
NR1I3-228ENST00000511676 ZNF662Q6ZS27 426 aa9.83□□□□□ -0.84
NR1I3-228ENST00000511676 EHBP1Q8NDI1 1231 aa9.83□□□□□ -0.84
NR1I3-228ENST00000511676 LMO3Q8TAP4 145 aa9.83□□□□□ -0.84
NR1I3-228ENST00000511676 PLEKHO2Q8TD55 490 aa9.83□□□□□ -0.84
NR1I3-228ENST00000511676 DHX38Q92620 1227 aaKnown RBP9.83□□□□□ -0.84
NR1I3-228ENST00000511676 SAAL1Q96ER3 474 aa9.83□□□□□ -0.84
NR1I3-228ENST00000511676 TCHPQ9BT92 498 aa9.83□□□□□ -0.84
NR1I3-228ENST00000511676 STK33Q9BYT3 514 aa9.83□□□□□ -0.84
NR1I3-228ENST00000511676 TMEM117Q9H0C3 514 aa9.83□□□□□ -0.84
NR1I3-228ENST00000511676 INTS2Q9H0H0 1204 aaKnown RBP9.83□□□□□ -0.84
NR1I3-228ENST00000511676 LMAN2LQ9H0V9 348 aa9.83□□□□□ -0.84
NR1I3-228ENST00000511676 CDT1Q9H211 546 aa9.83□□□□□ -0.84
NR1I3-228ENST00000511676 PDZD7Q9H5P4 517 aa9.83□□□□□ -0.84
NR1I3-228ENST00000511676 MINDY3Q9H8M7 445 aa9.83□□□□□ -0.84
NR1I3-228ENST00000511676 PLEKHA5Q9HAU0 1116 aa9.83□□□□□ -0.84
NR1I3-228ENST00000511676 SIX2Q9NPC8 291 aa9.83□□□□□ -0.84
NR1I3-228ENST00000511676 ANKFY1Q9P2R3 1169 aa9.83□□□□□ -0.84
NR1I3-228ENST00000511676 PYCARDQ9ULZ3 195 aa9.83□□□□□ -0.84
NR1I3-228ENST00000511676 DERAQ9Y315 318 aa9.83□□□□□ -0.84
NR1I3-228ENST00000511676 TTC28Q96AY4 2481 aa9.83□□□□□ -0.84
NR1I3-228ENST00000511676 PRR33A8MZF0 331 aa9.82□□□□□ -0.84
NR1I3-228ENST00000511676 TREHO43280 583 aa9.82□□□□□ -0.84
NR1I3-228ENST00000511676 IPO7O95373 1038 aaKnown RBP9.82□□□□□ -0.84
NR1I3-228ENST00000511676 SERPING1P05155 500 aa9.82□□□□□ -0.84
NR1I3-228ENST00000511676 EDN1P05305 212 aa9.82□□□□□ -0.84
NR1I3-228ENST00000511676 CCDC175P0C221 793 aa9.82□□□□□ -0.84
NR1I3-228ENST00000511676 TRIM49P0CI25 452 aa9.82□□□□□ -0.84
NR1I3-228ENST00000511676 TRIM49CP0CI26 452 aa9.82□□□□□ -0.84
NR1I3-228ENST00000511676 ARF4P18085 180 aaPredicted RBP9.82□□□□□ -0.84
NR1I3-228ENST00000511676 MATR3P43243 847 aaKnown RBP eCLIP9.82□□□□□ -0.84
NR1I3-228ENST00000511676 JAM2P57087 298 aa9.82□□□□□ -0.84
NR1I3-228ENST00000511676 POLR2FP61218 127 aaKnown RBP9.82□□□□□ -0.84
NR1I3-228ENST00000511676 WDR5P61964 334 aaKnown RBP9.82□□□□□ -0.84
NR1I3-228ENST00000511676 KRT83P78385 493 aa9.82□□□□□ -0.84
NR1I3-228ENST00000511676 MRPS6P82932 125 aaKnown RBP9.82□□□□□ -0.84
NR1I3-228ENST00000511676 GCNT1Q02742 428 aa9.82□□□□□ -0.84
NR1I3-228ENST00000511676 LEXMQ3ZCV2 418 aa9.82□□□□□ -0.84
NR1I3-228ENST00000511676 FAM26DQ5JW98 314 aa9.82□□□□□ -0.84
NR1I3-228ENST00000511676 SFMBT2Q5VUG0 894 aa9.82□□□□□ -0.84
NR1I3-228ENST00000511676 SV2AQ7L0J3 742 aa9.82□□□□□ -0.84
NR1I3-228ENST00000511676 RDH13Q8NBN7 331 aa9.82□□□□□ -0.84
NR1I3-228ENST00000511676 FBXO22Q8NEZ5 403 aa9.82□□□□□ -0.84
NR1I3-228ENST00000511676 TAF4BQ92750 862 aa9.82□□□□□ -0.84
NR1I3-228ENST00000511676 MRPL38Q96DV4 380 aaKnown RBP9.82□□□□□ -0.84
NR1I3-228ENST00000511676 MS4A3Q96HJ5 214 aa9.82□□□□□ -0.84
NR1I3-228ENST00000511676 SPAG5Q96R06 1193 aa9.82□□□□□ -0.84
NR1I3-228ENST00000511676 YME1L1Q96TA2 773 aa9.82□□□□□ -0.84
NR1I3-228ENST00000511676 TRAIPQ9BWF2 469 aa9.82□□□□□ -0.84
NR1I3-228ENST00000511676 CELF4Q9BZC1 486 aaKnown RBP9.82□□□□□ -0.84
NR1I3-228ENST00000511676 HAPLN2Q9GZV7 340 aa9.82□□□□□ -0.84
NR1I3-228ENST00000511676 LUC7LQ9NQ29 371 aaKnown RBP9.82□□□□□ -0.84
NR1I3-228ENST00000511676 CHST12Q9NRB3 414 aa9.82□□□□□ -0.84
NR1I3-228ENST00000511676 AGPAT5Q9NUQ2 364 aa9.82□□□□□ -0.84
NR1I3-228ENST00000511676 TRPV2Q9Y5S1 764 aa9.82□□□□□ -0.84
NR1I3-228ENST00000511676 UMODL1Q5DID0 1318 aa9.82□□□□□ -0.84
NR1I3-228ENST00000511676 VCANP13611 3396 aa9.81□□□□□ -0.84
NR1I3-228ENST00000511676 CARNS1A5YM72 827 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms