RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-208ENST00000511001 BICD1Q96G01 975 aa13.15□□□□□ -0.3
CHFR-208ENST00000511001 MYADMQ96S97 322 aa13.15□□□□□ -0.3
CHFR-208ENST00000511001 PRKD2Q9BZL6 878 aa13.15□□□□□ -0.3
CHFR-208ENST00000511001 ST6GALNAC4Q9H4F1 302 aa13.15□□□□□ -0.3
CHFR-208ENST00000511001 TUBGCP4Q9UGJ1 667 aa13.15□□□□□ -0.3
CHFR-208ENST00000511001 TSC2P49815 1807 aa13.14□□□□□ -0.31
CHFR-208ENST00000511001 MYMKA6NI61 221 aa13.14□□□□□ -0.31
CHFR-208ENST00000511001 OGTO15294 1046 aa13.14□□□□□ -0.31
CHFR-208ENST00000511001 TBC1D4O60343 1298 aa13.14□□□□□ -0.31
CHFR-208ENST00000511001 PPP1R37O75864 691 aa13.14□□□□□ -0.31
CHFR-208ENST00000511001 KRT18P05783 430 aaKnown RBP13.14□□□□□ -0.31
CHFR-208ENST00000511001 ADRB2P07550 413 aa13.14□□□□□ -0.31
CHFR-208ENST00000511001 CLTAP09496 248 aa13.14□□□□□ -0.31
CHFR-208ENST00000511001 SCP2P22307 547 aa13.14□□□□□ -0.31
CHFR-208ENST00000511001 RPL9P32969 192 aaKnown RBP13.14□□□□□ -0.31
CHFR-208ENST00000511001 OR1D2P34982 312 aa13.14□□□□□ -0.31
CHFR-208ENST00000511001 LIG4P49917 911 aa13.14□□□□□ -0.31
CHFR-208ENST00000511001 SPAG1Q07617 926 aa13.14□□□□□ -0.31
CHFR-208ENST00000511001 ZC2HC1CQ53FD0 456 aaPredicted RBP13.14□□□□□ -0.31
CHFR-208ENST00000511001 RRAGBQ5VZM2 374 aa13.14□□□□□ -0.31
CHFR-208ENST00000511001 DYMQ7RTS9 669 aa13.14□□□□□ -0.31
CHFR-208ENST00000511001 MAP4K3Q8IVH8 894 aa13.14□□□□□ -0.31
CHFR-208ENST00000511001 LINC00301Q8NCQ3 95 aa13.14□□□□□ -0.31
CHFR-208ENST00000511001 ACSF2Q96CM8 615 aaPredicted RBP13.14□□□□□ -0.31
CHFR-208ENST00000511001 MFSD14AQ96MC6 490 aa13.14□□□□□ -0.31
CHFR-208ENST00000511001 PHOX2BQ99453 314 aa13.14□□□□□ -0.31
CHFR-208ENST00000511001 STRA6Q9BX79 667 aa13.14□□□□□ -0.31
CHFR-208ENST00000511001 ZHX3Q9H4I2 956 aa13.14□□□□□ -0.31
CHFR-208ENST00000511001 PLEKHA5Q9HAU0 1116 aa13.14□□□□□ -0.31
CHFR-208ENST00000511001 CCDC39Q9UFE4 941 aa13.14□□□□□ -0.31
CHFR-208ENST00000511001 BACE2Q9Y5Z0 518 aa13.14□□□□□ -0.31
CHFR-208ENST00000511001 A0A0B4J269 797 aa13.13□□□□□ -0.31
CHFR-208ENST00000511001 LACTBL1A8MY62 500 aa13.13□□□□□ -0.31
CHFR-208ENST00000511001 TISP43B9A030 160 aa13.13□□□□□ -0.31
CHFR-208ENST00000511001 ANKRD63C9JTQ0 380 aa13.13□□□□□ -0.31
CHFR-208ENST00000511001 HNRNPDLO14979 420 aaKnown RBP13.13□□□□□ -0.31
CHFR-208ENST00000511001 TRAPPC3O43617 180 aa13.13□□□□□ -0.31
CHFR-208ENST00000511001 TBCAO75347 108 aaKnown RBP13.13□□□□□ -0.31
CHFR-208ENST00000511001 PDGFBP01127 241 aaPredicted RBP13.13□□□□□ -0.31
CHFR-208ENST00000511001 C8AP07357 584 aa13.13□□□□□ -0.31
CHFR-208ENST00000511001 LRPAP1P30533 357 aa13.13□□□□□ -0.31
CHFR-208ENST00000511001 MATR3P43243 847 aaKnown RBP eCLIP13.13□□□□□ -0.31
CHFR-208ENST00000511001 MTMR3Q13615 1198 aa13.13□□□□□ -0.31
CHFR-208ENST00000511001 MRPL58Q14197 206 aaKnown RBP13.13□□□□□ -0.31
CHFR-208ENST00000511001 ENOX2Q16206 610 aaKnown RBP13.13□□□□□ -0.31
CHFR-208ENST00000511001 VARS2Q5ST30 1063 aaKnown RBP13.13□□□□□ -0.31
CHFR-208ENST00000511001 ANKS3Q6ZW76 656 aa13.13□□□□□ -0.31
CHFR-208ENST00000511001 SFR1Q86XK3 245 aa13.13□□□□□ -0.31
CHFR-208ENST00000511001 UBALD2Q8IYN6 164 aa13.13□□□□□ -0.31
CHFR-208ENST00000511001 FBXL6Q8N531 539 aa13.13□□□□□ -0.31
CHFR-208ENST00000511001 KRI1Q8N9T8 703 aaKnown RBP13.13□□□□□ -0.31
CHFR-208ENST00000511001 DDX12PQ92771 950 aa13.13□□□□□ -0.31
CHFR-208ENST00000511001 SUSD3Q96L08 255 aa13.13□□□□□ -0.31
CHFR-208ENST00000511001 IKZF4Q9H2S9 585 aa13.13□□□□□ -0.31
CHFR-208ENST00000511001 CDY1Q9Y6F8 540 aa13.13□□□□□ -0.31
CHFR-208ENST00000511001 SYN3O14994 580 aa13.12□□□□□ -0.31
CHFR-208ENST00000511001 HNRNPA1P09651 372 aaKnown RBP eCLIP13.12□□□□□ -0.31
CHFR-208ENST00000511001 HOXA9P31269 272 aa13.12□□□□□ -0.31
CHFR-208ENST00000511001 GUCY2FP51841 1108 aa13.12□□□□□ -0.31
CHFR-208ENST00000511001 VCPP55072 806 aaKnown RBP13.12□□□□□ -0.31
CHFR-208ENST00000511001 NTHL1P78549 312 aa13.12□□□□□ -0.31
CHFR-208ENST00000511001 AXDND1Q5T1B0 1012 aaPredicted RBP13.12□□□□□ -0.31
CHFR-208ENST00000511001 LIN9Q5TKA1 542 aa13.12□□□□□ -0.31
CHFR-208ENST00000511001 SV2BQ7L1I2 683 aa13.12□□□□□ -0.31
CHFR-208ENST00000511001 ZNF720Q7Z2F6 126 aa13.12□□□□□ -0.31
CHFR-208ENST00000511001 STAMQ92783 540 aa13.12□□□□□ -0.31
CHFR-208ENST00000511001 KIF12Q96FN5 646 aa13.12□□□□□ -0.31
CHFR-208ENST00000511001 PANK2Q9BZ23 570 aa13.12□□□□□ -0.31
CHFR-208ENST00000511001 KCNK12Q9HB15 430 aa13.12□□□□□ -0.31
CHFR-208ENST00000511001 PIDD1Q9HB75 910 aa13.12□□□□□ -0.31
CHFR-208ENST00000511001 TFIP11Q9UBB9 837 aaKnown RBP13.12□□□□□ -0.31
CHFR-208ENST00000511001 EPS15L1Q9UBC2 864 aa13.12□□□□□ -0.31
CHFR-208ENST00000511001 CPSF3Q9UKF6 684 aaKnown RBP13.12□□□□□ -0.31
CHFR-208ENST00000511001 STYXL1Q9Y6J8 313 aa13.12□□□□□ -0.31
CHFR-208ENST00000511001 FRMD3A2A2Y4 597 aa13.11□□□□□ -0.31
CHFR-208ENST00000511001 WDR27A2RRH5 827 aa13.11□□□□□ -0.31
CHFR-208ENST00000511001 CCL16O15467 120 aa13.11□□□□□ -0.31
CHFR-208ENST00000511001 POU2F2P09086 479 aa13.11□□□□□ -0.31
CHFR-208ENST00000511001 CYP3A5P20815 502 aa13.11□□□□□ -0.31
CHFR-208ENST00000511001 GBP2P32456 591 aaPredicted RBP13.11□□□□□ -0.31
CHFR-208ENST00000511001 TXLNAP40222 546 aa13.11□□□□□ -0.31
CHFR-208ENST00000511001 AARSP49588 968 aaKnown RBP eCLIP13.11□□□□□ -0.31
CHFR-208ENST00000511001 ROR1Q01973 937 aa13.11□□□□□ -0.31
CHFR-208ENST00000511001 PPP2R3AQ06190 1150 aa13.11□□□□□ -0.31
CHFR-208ENST00000511001 KCNA1Q09470 495 aa13.11□□□□□ -0.31
CHFR-208ENST00000511001 STK38Q15208 465 aa13.11□□□□□ -0.31
CHFR-208ENST00000511001 KYAT1Q16773 422 aa13.11□□□□□ -0.31
CHFR-208ENST00000511001 UVSSAQ2YD98 709 aa13.11□□□□□ -0.31
CHFR-208ENST00000511001 PPM1LQ5SGD2 360 aa13.11□□□□□ -0.31
CHFR-208ENST00000511001 IER5LQ5T953 404 aa13.11□□□□□ -0.31
CHFR-208ENST00000511001 FOXD4L5Q5VV16 416 aaPredicted RBP13.11□□□□□ -0.31
CHFR-208ENST00000511001 SLC8B1Q6J4K2 584 aa13.11□□□□□ -0.31
CHFR-208ENST00000511001 CCDC73Q6ZRK6 1079 aa13.11□□□□□ -0.31
CHFR-208ENST00000511001 GRASPQ7Z6J2 395 aaPredicted RBP13.11□□□□□ -0.31
CHFR-208ENST00000511001 HSCBQ8IWL3 235 aa13.11□□□□□ -0.31
CHFR-208ENST00000511001 PRSS33Q8NF86 280 aa13.11□□□□□ -0.31
CHFR-208ENST00000511001 SLC7A14Q8TBB6 771 aa13.11□□□□□ -0.31
CHFR-208ENST00000511001 FOXD4L4Q8WXT5 416 aaPredicted RBP13.11□□□□□ -0.31
CHFR-208ENST00000511001 MSTO1Q9BUK6 570 aa13.11□□□□□ -0.31
CHFR-208ENST00000511001 FGFBP2Q9BYJ0 223 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms