RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 LSP1P33241 339 aa9.11□□□□□ -0.95
USP53-206ENST00000510737 IL12RB1P42701 662 aa9.11□□□□□ -0.95
USP53-206ENST00000510737 CLK3P49761 638 aaKnown RBP9.11□□□□□ -0.95
USP53-206ENST00000510737 NHLH2Q02577 135 aa9.11□□□□□ -0.95
USP53-206ENST00000510737 BEAN1Q3B7T3 259 aa9.11□□□□□ -0.95
USP53-206ENST00000510737 HOMER1Q86YM7 354 aa9.11□□□□□ -0.95
USP53-206ENST00000510737 NIM1KQ8IY84 436 aa9.11□□□□□ -0.95
USP53-206ENST00000510737 BBC3Q96PG8 261 aaPredicted RBP9.11□□□□□ -0.95
USP53-206ENST00000510737 SYT17Q9BSW7 474 aa9.11□□□□□ -0.95
USP53-206ENST00000510737 SYBUQ9NX95 663 aa9.11□□□□□ -0.95
USP53-206ENST00000510737 ZNHIT2Q9UHR6 403 aa9.11□□□□□ -0.95
USP53-206ENST00000510737 NRAPQ86VF7 1730 aa9.11□□□□□ -0.95
USP53-206ENST00000510737 LRPPRCP42704 1394 aaKnown RBP9.11□□□□□ -0.95
USP53-206ENST00000510737 PARD3Q8TEW0 1356 aa9.11□□□□□ -0.95
USP53-206ENST00000510737 THSD7AQ9UPZ6 1657 aa9.1□□□□□ -0.95
USP53-206ENST00000510737 NRP2O60462 931 aa9.1□□□□□ -0.95
USP53-206ENST00000510737 NDUFA10O95299 355 aa9.1□□□□□ -0.95
USP53-206ENST00000510737 XPAP23025 273 aaPredicted RBP9.1□□□□□ -0.95
USP53-206ENST00000510737 LSSP48449 732 aa9.1□□□□□ -0.95
USP53-206ENST00000510737 APBA1Q02410 837 aa9.1□□□□□ -0.95
USP53-206ENST00000510737 ARHGEF19Q8IW93 802 aa9.1□□□□□ -0.95
USP53-206ENST00000510737 DCLRE1CQ96SD1 692 aaKnown RBP9.1□□□□□ -0.95
USP53-206ENST00000510737 RIOX1Q9H6W3 641 aa9.1□□□□□ -0.95
USP53-206ENST00000510737 CASZ1Q86V15 1759 aa9.09□□□□□ -0.95
USP53-206ENST00000510737 PRR5-ARHGAP8B1AHC4 643 aa9.09□□□□□ -0.95
USP53-206ENST00000510737 LTA4HP09960 611 aaKnown RBP9.09□□□□□ -0.95
USP53-206ENST00000510737 HNRNPA0Q13151 305 aaKnown RBP9.09□□□□□ -0.95
USP53-206ENST00000510737 PDCD4Q53EL6 469 aaKnown RBP9.09□□□□□ -0.95
USP53-206ENST00000510737 PITRM1Q5JRX3 1037 aa9.09□□□□□ -0.95
USP53-206ENST00000510737 METRNLQ641Q3 311 aa9.09□□□□□ -0.95
USP53-206ENST00000510737 CCDC62Q6P9F0 684 aa9.09□□□□□ -0.95
USP53-206ENST00000510737 OR10H5Q8NGA6 315 aa9.09□□□□□ -0.95
USP53-206ENST00000510737 CEP95Q96GE4 821 aa9.09□□□□□ -0.95
USP53-206ENST00000510737 NEU1Q99519 415 aa9.09□□□□□ -0.95
USP53-206ENST00000510737 CHD4Q14839 1912 aa9.09□□□□□ -0.95
USP53-206ENST00000510737 ABCA3Q99758 1704 aa9.08□□□□□ -0.96
USP53-206ENST00000510737 SHANK3Q9BYB0 1731 aa9.08□□□□□ -0.96
USP53-206ENST00000510737 SPATA31A5Q5VU36 1347 aa9.08□□□□□ -0.96
USP53-206ENST00000510737 SPATA31A7Q8IWB4 1347 aa9.08□□□□□ -0.96
USP53-206ENST00000510737 RNASET2O00584 256 aaKnown RBP9.08□□□□□ -0.96
USP53-206ENST00000510737 KDM1AO60341 852 aa9.08□□□□□ -0.96
USP53-206ENST00000510737 FKBP9O95302 570 aa9.08□□□□□ -0.96
USP53-206ENST00000510737 SCNN1BP51168 640 aa9.08□□□□□ -0.96
USP53-206ENST00000510737 NRG3P56975 720 aa9.08□□□□□ -0.96
USP53-206ENST00000510737 CCDC142Q17RM4 750 aa9.08□□□□□ -0.96
USP53-206ENST00000510737 BROXQ5VW32 411 aa9.08□□□□□ -0.96
USP53-206ENST00000510737 DRICH1Q6PGQ1 229 aaPredicted RBP9.08□□□□□ -0.96
USP53-206ENST00000510737 FKBP9P1Q75LS8 142 aa9.08□□□□□ -0.96
USP53-206ENST00000510737 GLB1L2Q8IW92 636 aa9.08□□□□□ -0.96
USP53-206ENST00000510737 ZNF764Q96H86 408 aaPredicted RBP9.08□□□□□ -0.96
USP53-206ENST00000510737 ADAM2Q99965 735 aa9.08□□□□□ -0.96
USP53-206ENST00000510737 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.08□□□□□ -0.96
USP53-206ENST00000510737 CYP4F11Q9HBI6 524 aa9.08□□□□□ -0.96
USP53-206ENST00000510737 EMC7Q9NPA0 242 aa9.08□□□□□ -0.96
USP53-206ENST00000510737 IQGAP3Q86VI3 1631 aa9.07□□□□□ -0.96
USP53-206ENST00000510737 ZAR1LA6NP61 321 aa9.07□□□□□ -0.96
USP53-206ENST00000510737 KIAA0355O15063 1070 aa9.07□□□□□ -0.96
USP53-206ENST00000510737 PRAMEF4O60810 478 aa9.07□□□□□ -0.96
USP53-206ENST00000510737 ITGA10O75578 1167 aa9.07□□□□□ -0.96
USP53-206ENST00000510737 HSP90B1P14625 803 aaKnown RBP9.07□□□□□ -0.96
USP53-206ENST00000510737 DALRD3Q5D0E6 543 aaKnown RBP9.07□□□□□ -0.96
USP53-206ENST00000510737 FRMD7Q6ZUT3 714 aa9.07□□□□□ -0.96
USP53-206ENST00000510737 RNF169Q8NCN4 708 aa9.07□□□□□ -0.96
USP53-206ENST00000510737 MDM1Q8TC05 714 aa9.07□□□□□ -0.96
USP53-206ENST00000510737 APPBP2Q92624 585 aa9.07□□□□□ -0.96
USP53-206ENST00000510737 EPN1Q9Y6I3 576 aaPredicted RBP9.07□□□□□ -0.96
USP53-206ENST00000510737 LPLP06858 475 aa9.06□□□□□ -0.96
USP53-206ENST00000510737 IL2P60568 153 aa9.06□□□□□ -0.96
USP53-206ENST00000510737 PDCD1Q15116 288 aa9.06□□□□□ -0.96
USP53-206ENST00000510737 C19orf54Q5BKX5 351 aa9.06□□□□□ -0.96
USP53-206ENST00000510737 PPM1KQ8N3J5 372 aa9.06□□□□□ -0.96
USP53-206ENST00000510737 OR14C36Q8NHC7 312 aa9.06□□□□□ -0.96
USP53-206ENST00000510737 SNX33Q8WV41 574 aa9.06□□□□□ -0.96
USP53-206ENST00000510737 CDY2AQ9Y6F7 541 aa9.06□□□□□ -0.96
USP53-206ENST00000510737 ANKRD50Q9ULJ7 1429 aa9.05□□□□□ -0.96
USP53-206ENST00000510737 CDC42BPGQ6DT37 1551 aa9.05□□□□□ -0.96
USP53-206ENST00000510737 GAGE12BA1L429 117 aa9.05□□□□□ -0.96
USP53-206ENST00000510737 GAGE12HA6NDE8 117 aa9.05□□□□□ -0.96
USP53-206ENST00000510737 UNC119BA6NIH7 251 aa9.05□□□□□ -0.96
USP53-206ENST00000510737 TBKBP1A7MCY6 615 aa9.05□□□□□ -0.96
USP53-206ENST00000510737 WNT10BO00744 389 aa9.05□□□□□ -0.96
USP53-206ENST00000510737 TYRP1P17643 537 aa9.05□□□□□ -0.96
USP53-206ENST00000510737 CANXP27824 592 aaKnown RBP9.05□□□□□ -0.96
USP53-206ENST00000510737 TAP1Q03518 808 aa9.05□□□□□ -0.96
USP53-206ENST00000510737 FOXI1Q12951 378 aa9.05□□□□□ -0.96
USP53-206ENST00000510737 MFSD14BQ5SR56 506 aa9.05□□□□□ -0.96
USP53-206ENST00000510737 FAM102AQ5T9C2 384 aaPredicted RBP9.05□□□□□ -0.96
USP53-206ENST00000510737 CPEB3Q8NE35 698 aaKnown RBP9.05□□□□□ -0.96
USP53-206ENST00000510737 KCTD10Q9H3F6 313 aa9.05□□□□□ -0.96
USP53-206ENST00000510737 NEXMIFQ5QGS0 1516 aa9.05□□□□□ -0.96
USP53-206ENST00000510737 HFM1A2PYH4 1435 aa9.05□□□□□ -0.96
USP53-206ENST00000510737 CTSSP25774 331 aa9.04□□□□□ -0.96
USP53-206ENST00000510737 BMPR1AP36894 532 aa9.04□□□□□ -0.96
USP53-206ENST00000510737 OCRLQ01968 901 aa9.04□□□□□ -0.96
USP53-206ENST00000510737 DDB1Q16531 1140 aa9.04□□□□□ -0.96
USP53-206ENST00000510737 BMT2Q1RMZ1 405 aa9.04□□□□□ -0.96
USP53-206ENST00000510737 CT83Q5H943 113 aa9.04□□□□□ -0.96
USP53-206ENST00000510737 ADGRG3Q86Y34 549 aa9.04□□□□□ -0.96
USP53-206ENST00000510737 CMTR2Q8IYT2 770 aaKnown RBP9.04□□□□□ -0.96
USP53-206ENST00000510737 OR2W6PQ8NHA6 318 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms