RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 NBPF15Q8N660 670 aa8.78□□□□□ -1
HTT-208ENST00000510626 UGGT1Q9NYU2 1555 aa8.78□□□□□ -1
HTT-208ENST00000510626 PHF20L1A8MW92 1017 aa8.78□□□□□ -1
HTT-208ENST00000510626 LZTS3O60299 673 aaPredicted RBP8.78□□□□□ -1
HTT-208ENST00000510626 ENO1P06733 434 aaKnown RBP8.78□□□□□ -1
HTT-208ENST00000510626 CCNA1P78396 465 aa8.78□□□□□ -1
HTT-208ENST00000510626 ILKAPQ9H0C8 392 aaPredicted RBP8.78□□□□□ -1
HTT-208ENST00000510626 PCDHB8Q9UN66 801 aa8.78□□□□□ -1
HTT-208ENST00000510626 SP100P23497 879 aaPredicted RBP8.78□□□□□ -1
HTT-208ENST00000510626 BCAR1P56945 870 aa8.78□□□□□ -1
HTT-208ENST00000510626 GEMIN4P57678 1058 aaKnown RBP8.78□□□□□ -1
HTT-208ENST00000510626 SNIP1Q8TAD8 396 aaKnown RBP8.78□□□□□ -1
HTT-208ENST00000510626 SMCR8Q8TEV9 937 aaPredicted RBP8.78□□□□□ -1
HTT-208ENST00000510626 TRPM1Q7Z4N2 1603 aa8.78□□□□□ -1
HTT-208ENST00000510626 SDC4P31431 198 aa8.78□□□□□ -1
HTT-208ENST00000510626 ATXN3P54252 364 aaPredicted RBP8.78□□□□□ -1
HTT-208ENST00000510626 FASTKD1Q53R41 847 aaKnown RBP8.78□□□□□ -1
HTT-208ENST00000510626 SCUBE1Q8IWY4 988 aa8.78□□□□□ -1
HTT-208ENST00000510626 TMEM245Q9H330 911 aa8.78□□□□□ -1
HTT-208ENST00000510626 TBC1D22BQ9NU19 505 aa8.78□□□□□ -1
HTT-208ENST00000510626 CDHR2Q9BYE9 1310 aa8.78□□□□□ -1
HTT-208ENST00000510626 TESPA1A2RU30 521 aaPredicted RBP8.78□□□□□ -1
HTT-208ENST00000510626 ACAT1P24752 427 aaKnown RBP8.78□□□□□ -1
HTT-208ENST00000510626 IMPG1Q17R60 797 aa8.78□□□□□ -1
HTT-208ENST00000510626 SERPINB13Q9UIV8 391 aa8.78□□□□□ -1
HTT-208ENST00000510626 SLC4A7Q9Y6M7 1214 aa8.78□□□□□ -1
HTT-208ENST00000510626 FRMPD1Q5SYB0 1578 aa8.78□□□□□ -1
HTT-208ENST00000510626 DPYDQ12882 1025 aa8.78□□□□□ -1
HTT-208ENST00000510626 ITGA9Q13797 1035 aa8.78□□□□□ -1
HTT-208ENST00000510626 RDH13Q8NBN7 331 aa8.78□□□□□ -1
HTT-208ENST00000510626 BARHL2Q9NY43 387 aa8.78□□□□□ -1
HTT-208ENST00000510626 FTLP02792 175 aaPredicted RBP8.77□□□□□ -1
HTT-208ENST00000510626 KCNF1Q9H3M0 494 aa8.77□□□□□ -1
HTT-208ENST00000510626 FAM200BP0CF97 657 aa8.77□□□□□ -1
HTT-208ENST00000510626 KDSRQ06136 332 aa8.77□□□□□ -1
HTT-208ENST00000510626 JAMLQ86YT9 394 aa8.77□□□□□ -1
HTT-208ENST00000510626 CNDP1Q96KN2 507 aa8.77□□□□□ -1
HTT-208ENST00000510626 KLHL31Q9H511 634 aa8.77□□□□□ -1
HTT-208ENST00000510626 PRDM16Q9HAZ2 1276 aa8.77□□□□□ -1
HTT-208ENST00000510626 TAGLN3Q9UI15 199 aa8.77□□□□□ -1
HTT-208ENST00000510626 DTNAQ9Y4J8 743 aa8.77□□□□□ -1
HTT-208ENST00000510626 CPA3P15088 417 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 ANXA11P50995 505 aaKnown RBP8.77□□□□□ -1.01
HTT-208ENST00000510626 BFSP2Q13515 415 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 ZNF667Q5HYK9 610 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 PRPF39Q86UA1 669 aaKnown RBP8.77□□□□□ -1.01
HTT-208ENST00000510626 PTPN12Q05209 780 aaKnown RBP8.77□□□□□ -1.01
HTT-208ENST00000510626 PAPD7Q5XG87 772 aaKnown RBP8.77□□□□□ -1.01
HTT-208ENST00000510626 GTSE1Q9NYZ3 720 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 DDX39AO00148 427 aaKnown RBP8.77□□□□□ -1.01
HTT-208ENST00000510626 ZNF197O14709 1029 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 HLA-DPA1P20036 260 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 ITGA1P56199 1179 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 GRM4Q14833 912 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 NCAPHQ15003 741 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 SGSM1Q2NKQ1 1148 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 CLEC4FQ8N1N0 589 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 LRRC59Q96AG4 307 aaKnown RBP8.77□□□□□ -1.01
HTT-208ENST00000510626 MAGI2Q86UL8 1455 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 USP1O94782 785 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 POLD1P28340 1107 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 COPB2P35606 906 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 HSD17B3P37058 310 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 DYNLT1P63172 113 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 CHAMP1Q96JM3 812 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 COQ7Q99807 217 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 HDAC6Q9UBN7 1215 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 PPME1Q9Y570 386 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 A0A087WXM4 84 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 GNPATO15228 680 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 VPS4BO75351 444 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 TMBIM4Q9HC24 238 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 APEX2Q9UBZ4 518 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 MAD2L2Q9UI95 211 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 IQGAP3Q86VI3 1631 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 TK2O00142 265 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 STIP1P31948 543 aaKnown RBP8.77□□□□□ -1.01
HTT-208ENST00000510626 ARSEP51690 589 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 PMS1P54277 932 aaKnown RBP8.77□□□□□ -1.01
HTT-208ENST00000510626 FAM47AQ5JRC9 791 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 CCNYL1Q8N7R7 359 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 ZNF513Q8N8E2 541 aaPredicted RBP8.77□□□□□ -1.01
HTT-208ENST00000510626 SLC35G2Q8TBE7 412 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 MIEF2Q96C03 454 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 INO80BQ9C086 356 aaPredicted RBP8.77□□□□□ -1.01
HTT-208ENST00000510626 STARD13Q9Y3M8 1113 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 C21orf2O43822 256 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 WFS1O76024 890 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 TFAMQ00059 246 aaKnown RBP8.77□□□□□ -1.01
HTT-208ENST00000510626 TJAP1Q5JTD0 557 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 HEXIM2Q96MH2 286 aaKnown RBP8.77□□□□□ -1.01
HTT-208ENST00000510626 ANO3Q9BYT9 981 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 MYL6P60660 151 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 ZNF594Q96JF6 807 aaPredicted RBP8.77□□□□□ -1.01
HTT-208ENST00000510626 TOPORSQ9NS56 1045 aaPredicted RBP8.77□□□□□ -1.01
HTT-208ENST00000510626 SLC24A2Q9UI40 661 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 TBC1D12O60347 775 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 STKLD1Q8NE28 680 aa8.77□□□□□ -1.01
HTT-208ENST00000510626 BTDP43251 543 aa8.76□□□□□ -1.01
HTT-208ENST00000510626 GYS2P54840 703 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms