RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 FHOD1Q9Y613 1164 aa11.14□□□□□ -0.63
NEK1-206ENST00000510533 ZNF609O15014 1411 aa11.14□□□□□ -0.63
NEK1-206ENST00000510533 ZNF197O14709 1029 aa11.14□□□□□ -0.63
NEK1-206ENST00000510533 TRIM66O15016 1216 aa11.14□□□□□ -0.63
NEK1-206ENST00000510533 ATP6V1E1P36543 226 aa11.14□□□□□ -0.63
NEK1-206ENST00000510533 SULT1E1P49888 294 aa11.14□□□□□ -0.63
NEK1-206ENST00000510533 PIGHQ14442 188 aaPredicted RBP11.14□□□□□ -0.63
NEK1-206ENST00000510533 RABL6Q3YEC7 729 aaPredicted RBP11.14□□□□□ -0.63
NEK1-206ENST00000510533 SYCP2LQ5T4T6 812 aa11.14□□□□□ -0.63
NEK1-206ENST00000510533 KIRREL3Q8IZU9 778 aa11.14□□□□□ -0.63
NEK1-206ENST00000510533 MRPL1Q9BYD6 325 aaKnown RBP11.14□□□□□ -0.63
NEK1-206ENST00000510533 GPBP1L1Q9HC44 474 aaPredicted RBP11.14□□□□□ -0.63
NEK1-206ENST00000510533 JPH1Q9HDC5 661 aaPredicted RBP11.14□□□□□ -0.63
NEK1-206ENST00000510533 SMARCAL1Q9NZC9 954 aa11.14□□□□□ -0.63
NEK1-206ENST00000510533 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.14□□□□□ -0.63
NEK1-206ENST00000510533 MYMKA6NI61 221 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 PDGFRAP16234 1089 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 STILQ15468 1287 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 UGP2Q16851 508 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 C16orf89Q6UX73 402 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 ELMOD1Q8N336 334 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 TMCO5AQ8N6Q1 288 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 TEX9Q8N6V9 391 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 RNF149Q8NC42 400 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 SCFD1Q8WVM8 642 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 TMA16Q96EY4 203 aaKnown RBP11.13□□□□□ -0.63
NEK1-206ENST00000510533 ISCUQ9H1K1 167 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 HERC5Q9UII4 1024 aaKnown RBP11.13□□□□□ -0.63
NEK1-206ENST00000510533 MTO1Q9Y2Z2 717 aaKnown RBP11.13□□□□□ -0.63
NEK1-206ENST00000510533 TMEM120BA0PK00 339 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 PSMD3O43242 534 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 KLHL2O95198 593 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 GYPCP04921 128 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 ENO3P13929 434 aaPredicted RBP11.13□□□□□ -0.63
NEK1-206ENST00000510533 NBPF20Q3BBV1 942 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 MMGT1Q8N4V1 131 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 ZNF555Q8NEP9 628 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 NSUN4Q96CB9 384 aaKnown RBP11.13□□□□□ -0.63
NEK1-206ENST00000510533 MARCOQ9UEW3 520 aaPredicted RBP11.13□□□□□ -0.63
NEK1-206ENST00000510533 ZNF229Q9UJW7 825 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 TBX3O15119 743 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 DGAT1O75907 488 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 TMEM253P0C7T8 217 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 KCNA3P22001 575 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 IRAK1P51617 712 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 LRRC36Q1X8D7 754 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 POTEAQ6S8J7 498 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 RRM2BQ7LG56 351 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 SEPT8Q92599 483 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 MMP19Q99542 508 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 SYNDIG1LA6NDD5 238 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 MAP4P27816 1152 aaKnown RBP11.13□□□□□ -0.63
NEK1-206ENST00000510533 TRPC1P48995 793 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 CARSP49589 748 aaKnown RBP11.13□□□□□ -0.63
NEK1-206ENST00000510533 PTK7Q13308 1070 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 DCAF4L1Q3SXM0 396 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 LRRC8BQ6P9F7 803 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 USP38Q8NB14 1042 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 AGAP3Q96P47 875 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 PCMTD2Q9NV79 361 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 KCND2Q9NZV8 630 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 A2ML1A8K2U0 1454 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 C16orf96A6NNT2 1141 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 AKAP10O43572 662 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 KDM1AO60341 852 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 DEAF1O75398 565 aaPredicted RBP11.13□□□□□ -0.63
NEK1-206ENST00000510533 DAB1O75553 588 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 SPAG6O75602 509 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 CCDC85BQ15834 202 aaPredicted RBP11.13□□□□□ -0.63
NEK1-206ENST00000510533 SNRNP35Q16560 246 aaKnown RBP11.13□□□□□ -0.63
NEK1-206ENST00000510533 RBBP8NLQ8NC74 664 aaPredicted RBP11.13□□□□□ -0.63
NEK1-206ENST00000510533 EME1Q96AY2 570 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 TSPAN17Q96FV3 270 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 MCEEQ96PE7 176 aa11.13□□□□□ -0.63
NEK1-206ENST00000510533 NRKQ7Z2Y5 1582 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 PLA2R1Q13018 1463 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 PDS5AQ29RF7 1337 aaKnown RBP11.12□□□□□ -0.63
NEK1-206ENST00000510533 CCT8L1PA6NM43 557 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 RALAP11233 206 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 COMTP21964 271 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 HMOX2P30519 316 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 MAGEA4P43358 317 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 ZNF543Q08ER8 600 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 KRT72Q14CN4 511 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 SH3TC2Q8TF17 1288 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 DNAJC9Q8WXX5 260 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 SH3KBP1Q96B97 665 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 CMTM5Q96DZ9 223 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 DTNBP1Q96EV8 351 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 ERP44Q9BS26 406 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 THTPAQ9BU02 230 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 CCDC134Q9H6E4 229 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 DDX28Q9NUL7 540 aaKnown RBP11.12□□□□□ -0.63
NEK1-206ENST00000510533 PIM2Q9P1W9 311 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 SPATA31A3Q5VYP0 1347 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 PJA2O43164 708 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 MYBP10242 640 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 STAT5BP51692 787 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 RAP1GDS1P52306 607 aa11.12□□□□□ -0.63
NEK1-206ENST00000510533 RAD51Q06609 339 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms