RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 FAM78AQ5JUQ0 283 aa11.43□□□□□ -0.58
DDX41-211ENST00000510171 CYP4A22Q5TCH4 519 aa11.43□□□□□ -0.58
DDX41-211ENST00000510171 POTEHQ6S545 545 aa11.43□□□□□ -0.58
DDX41-211ENST00000510171 ALKAL1Q6UXT8 129 aa11.43□□□□□ -0.58
DDX41-211ENST00000510171 C3orf58Q8NDZ4 430 aa11.43□□□□□ -0.58
DDX41-211ENST00000510171 TOPORSQ9NS56 1045 aaPredicted RBP11.43□□□□□ -0.58
DDX41-211ENST00000510171 CDV3Q9UKY7 258 aaKnown RBP11.43□□□□□ -0.58
DDX41-211ENST00000510171 USP18Q9UMW8 372 aa11.43□□□□□ -0.58
DDX41-211ENST00000510171 NDRG2Q9UN36 371 aaKnown RBP11.43□□□□□ -0.58
DDX41-211ENST00000510171 TNFSF13BQ9Y275 285 aa11.43□□□□□ -0.58
DDX41-211ENST00000510171 WDR27A2RRH5 827 aa11.42□□□□□ -0.58
DDX41-211ENST00000510171 SHISA7A6NL88 538 aa11.42□□□□□ -0.58
DDX41-211ENST00000510171 CCDC169A6NNP5 214 aa11.42□□□□□ -0.58
DDX41-211ENST00000510171 PODXLO00592 558 aa11.42□□□□□ -0.58
DDX41-211ENST00000510171 SYN3O14994 580 aa11.42□□□□□ -0.58
DDX41-211ENST00000510171 LARGE1O95461 756 aa11.42□□□□□ -0.58
DDX41-211ENST00000510171 OR52Z1P0C646 297 aa11.42□□□□□ -0.58
DDX41-211ENST00000510171 FCARP24071 287 aa11.42□□□□□ -0.58
DDX41-211ENST00000510171 RPL9P32969 192 aaKnown RBP11.42□□□□□ -0.58
DDX41-211ENST00000510171 OSTNP61366 133 aa11.42□□□□□ -0.58
DDX41-211ENST00000510171 SOX4Q06945 474 aaPredicted RBP11.42□□□□□ -0.58
DDX41-211ENST00000510171 GRM2Q14416 872 aa11.42□□□□□ -0.58
DDX41-211ENST00000510171 PPP2R5DQ14738 602 aa11.42□□□□□ -0.58
DDX41-211ENST00000510171 XKR4Q5GH76 650 aa11.42□□□□□ -0.58
DDX41-211ENST00000510171 PRSS36Q5K4E3 855 aa11.42□□□□□ -0.58
DDX41-211ENST00000510171 TPGS2Q68CL5 300 aa11.42□□□□□ -0.58
DDX41-211ENST00000510171 HAUS3Q68CZ6 603 aa11.42□□□□□ -0.58
DDX41-211ENST00000510171 IQCEQ6IPM2 695 aa11.42□□□□□ -0.58
DDX41-211ENST00000510171 MAMSTRQ6ZN01 415 aa11.42□□□□□ -0.58
DDX41-211ENST00000510171 PDZD4Q76G19 769 aaPredicted RBP11.42□□□□□ -0.58
DDX41-211ENST00000510171 TCEAL8Q8IYN2 117 aa11.42□□□□□ -0.58
DDX41-211ENST00000510171 ELMOD1Q8N336 334 aa11.42□□□□□ -0.58
DDX41-211ENST00000510171 FAM3CQ92520 227 aa11.42□□□□□ -0.58
DDX41-211ENST00000510171 IRF7Q92985 503 aa11.42□□□□□ -0.58
DDX41-211ENST00000510171 TCEAL4Q96EI5 215 aa11.42□□□□□ -0.58
DDX41-211ENST00000510171 BHMT2Q9H2M3 363 aa11.42□□□□□ -0.58
DDX41-211ENST00000510171 LMAN1LQ9HAT1 526 aa11.42□□□□□ -0.58
DDX41-211ENST00000510171 GMEB2Q9UKD1 530 aa11.42□□□□□ -0.58
DDX41-211ENST00000510171 RAB23Q9ULC3 237 aa11.42□□□□□ -0.58
DDX41-211ENST00000510171 NUB1Q9Y5A7 615 aa11.42□□□□□ -0.58
DDX41-211ENST00000510171 DCHS1Q96JQ0 3298 aa11.42□□□□□ -0.58
DDX41-211ENST00000510171 SEC24AO95486 1093 aa11.41□□□□□ -0.58
DDX41-211ENST00000510171 KCNE1P15382 129 aa11.41□□□□□ -0.58
DDX41-211ENST00000510171 PSMC3P17980 439 aa11.41□□□□□ -0.58
DDX41-211ENST00000510171 GDI1P31150 447 aa11.41□□□□□ -0.58
DDX41-211ENST00000510171 CCT6AP40227 531 aaKnown RBP11.41□□□□□ -0.58
DDX41-211ENST00000510171 NEK4P51957 841 aa11.41□□□□□ -0.58
DDX41-211ENST00000510171 GUCY1B3Q02153 619 aa11.41□□□□□ -0.58
DDX41-211ENST00000510171 ORC2Q13416 577 aaPredicted RBP11.41□□□□□ -0.58
DDX41-211ENST00000510171 MRPL58Q14197 206 aaKnown RBP11.41□□□□□ -0.58
DDX41-211ENST00000510171 ECM1Q16610 540 aa11.41□□□□□ -0.58
DDX41-211ENST00000510171 ZNF568Q3ZCX4 644 aa11.41□□□□□ -0.58
DDX41-211ENST00000510171 CTXN3Q4LDR2 81 aa11.41□□□□□ -0.58
DDX41-211ENST00000510171 MAP4K3Q8IVH8 894 aa11.41□□□□□ -0.58
DDX41-211ENST00000510171 ZNF687Q8N1G0 1237 aa11.41□□□□□ -0.58
DDX41-211ENST00000510171 CELF5Q8N6W0 485 aaKnown RBP11.41□□□□□ -0.58
DDX41-211ENST00000510171 CEP120Q8N960 986 aa11.41□□□□□ -0.58
DDX41-211ENST00000510171 SMARCD2Q92925 531 aa11.41□□□□□ -0.58
DDX41-211ENST00000510171 ZNF512Q96ME7 567 aaPredicted RBP11.41□□□□□ -0.58
DDX41-211ENST00000510171 ZSWIM3Q96MP5 696 aa11.41□□□□□ -0.58
DDX41-211ENST00000510171 ZMAT2Q96NC0 199 aaKnown RBP11.41□□□□□ -0.58
DDX41-211ENST00000510171 ASB16Q96NS5 453 aa11.41□□□□□ -0.58
DDX41-211ENST00000510171 CNTNAP3BQ96NU0 1288 aa11.41□□□□□ -0.58
DDX41-211ENST00000510171 ACAP3Q96P50 834 aa11.41□□□□□ -0.58
DDX41-211ENST00000510171 ACO2Q99798 780 aaKnown RBP11.41□□□□□ -0.58
DDX41-211ENST00000510171 RTKNQ9BST9 563 aa11.41□□□□□ -0.58
DDX41-211ENST00000510171 TCHPQ9BT92 498 aa11.41□□□□□ -0.58
DDX41-211ENST00000510171 IER2Q9BTL4 223 aa11.41□□□□□ -0.58
DDX41-211ENST00000510171 MRPL4Q9BYD3 311 aaKnown RBP11.41□□□□□ -0.58
DDX41-211ENST00000510171 CNTNAP3Q9BZ76 1288 aa11.41□□□□□ -0.58
DDX41-211ENST00000510171 CDT1Q9H211 546 aa11.41□□□□□ -0.58
DDX41-211ENST00000510171 CHRDQ9H2X0 955 aa11.41□□□□□ -0.58
DDX41-211ENST00000510171 TMEM134Q9H6X4 195 aa11.41□□□□□ -0.58
DDX41-211ENST00000510171 ZNF334Q9HCZ1 680 aaPredicted RBP11.41□□□□□ -0.58
DDX41-211ENST00000510171 PTPRHQ9HD43 1115 aa11.41□□□□□ -0.58
DDX41-211ENST00000510171 TRPV5Q9NQA5 729 aa11.41□□□□□ -0.58
DDX41-211ENST00000510171 FBXL5Q9UKA1 691 aa11.41□□□□□ -0.58
DDX41-211ENST00000510171 MAFFQ9ULX9 164 aa11.41□□□□□ -0.58
DDX41-211ENST00000510171 KIAA1024Q9UPX6 916 aa11.41□□□□□ -0.58
DDX41-211ENST00000510171 INSL5Q9Y5Q6 135 aa11.41□□□□□ -0.58
DDX41-211ENST00000510171 PHLPP2Q6ZVD8 1323 aa11.4□□□□□ -0.58
DDX41-211ENST00000510171 ZNF263O14978 683 aa11.4□□□□□ -0.58
DDX41-211ENST00000510171 MCF2P10911 925 aa11.4□□□□□ -0.58
DDX41-211ENST00000510171 TGM1P22735 817 aa11.4□□□□□ -0.58
DDX41-211ENST00000510171 MARCKSP29966 332 aaPredicted RBP11.4□□□□□ -0.58
DDX41-211ENST00000510171 CCR2P41597 374 aa11.4□□□□□ -0.58
DDX41-211ENST00000510171 NPTX2P47972 431 aa11.4□□□□□ -0.58
DDX41-211ENST00000510171 CCR3P51677 355 aa11.4□□□□□ -0.58
DDX41-211ENST00000510171 PEX3P56589 373 aa11.4□□□□□ -0.58
DDX41-211ENST00000510171 TWF1Q12792 350 aa11.4□□□□□ -0.58
DDX41-211ENST00000510171 VITQ6UXI7 678 aa11.4□□□□□ -0.58
DDX41-211ENST00000510171 HS6ST3Q8IZP7 471 aa11.4□□□□□ -0.58
DDX41-211ENST00000510171 LEMD2Q8NC56 503 aa11.4□□□□□ -0.58
DDX41-211ENST00000510171 APPL2Q8NEU8 664 aa11.4□□□□□ -0.58
DDX41-211ENST00000510171 DEPDC1BQ8WUY9 529 aa11.4□□□□□ -0.58
DDX41-211ENST00000510171 C18orf25Q96B23 403 aaPredicted RBP11.4□□□□□ -0.58
DDX41-211ENST00000510171 TARS2Q9BW92 718 aaKnown RBP11.4□□□□□ -0.58
DDX41-211ENST00000510171 LRWD1Q9UFC0 647 aa11.4□□□□□ -0.58
DDX41-211ENST00000510171 AFF4Q9UHB7 1163 aaKnown RBP11.4□□□□□ -0.58
DDX41-211ENST00000510171 RBM19Q9Y4C8 960 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms