RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 SLITRK6Q9H5Y7 841 aa12.02□□□□□ -0.49
SNF8-207ENST00000509995 CLMPQ9H6B4 373 aa12.02□□□□□ -0.49
SNF8-207ENST00000509995 PTPRDP23468 1912 aa12.01□□□□□ -0.49
SNF8-207ENST00000509995 GOLGA4Q13439 2230 aaKnown RBP12.01□□□□□ -0.49
SNF8-207ENST00000509995 CHMP2AO43633 222 aa12.01□□□□□ -0.49
SNF8-207ENST00000509995 TSPAN1O60635 241 aa12.01□□□□□ -0.49
SNF8-207ENST00000509995 RNF40O75150 1001 aa12.01□□□□□ -0.49
SNF8-207ENST00000509995 STBD1O95210 358 aa12.01□□□□□ -0.49
SNF8-207ENST00000509995 SRGAP2CP0DJJ0 459 aa12.01□□□□□ -0.49
SNF8-207ENST00000509995 GJA1P17302 382 aa12.01□□□□□ -0.49
SNF8-207ENST00000509995 RXRAP19793 462 aa12.01□□□□□ -0.49
SNF8-207ENST00000509995 FGFR3P22607 806 aa12.01□□□□□ -0.49
SNF8-207ENST00000509995 AXLP30530 894 aa12.01□□□□□ -0.49
SNF8-207ENST00000509995 SFNP31947 248 aa12.01□□□□□ -0.49
SNF8-207ENST00000509995 ABCG1P45844 678 aa12.01□□□□□ -0.49
SNF8-207ENST00000509995 ANTXR2P58335 489 aa12.01□□□□□ -0.49
SNF8-207ENST00000509995 ROR1Q01973 937 aa12.01□□□□□ -0.49
SNF8-207ENST00000509995 TNK2Q07912 1038 aa12.01□□□□□ -0.49
SNF8-207ENST00000509995 HNRNPDQ14103 355 aaKnown RBP12.01□□□□□ -0.49
SNF8-207ENST00000509995 TEAD2Q15562 447 aa12.01□□□□□ -0.49
SNF8-207ENST00000509995 ARHGAP29Q52LW3 1261 aa12.01□□□□□ -0.49
SNF8-207ENST00000509995 TMEM196Q5HYL7 178 aa12.01□□□□□ -0.49
SNF8-207ENST00000509995 FSTL4Q6MZW2 842 aa12.01□□□□□ -0.49
SNF8-207ENST00000509995 HAUS6Q7Z4H7 955 aa12.01□□□□□ -0.49
SNF8-207ENST00000509995 SCUBE3Q8IX30 993 aa12.01□□□□□ -0.49
SNF8-207ENST00000509995 HS6ST3Q8IZP7 471 aa12.01□□□□□ -0.49
SNF8-207ENST00000509995 HDDC3Q8N4P3 179 aa12.01□□□□□ -0.49
SNF8-207ENST00000509995 CCDC82Q8N4S0 544 aa12.01□□□□□ -0.49
SNF8-207ENST00000509995 ZNF461Q8TAF7 563 aa12.01□□□□□ -0.49
SNF8-207ENST00000509995 CPB2Q96IY4 423 aa12.01□□□□□ -0.49
SNF8-207ENST00000509995 GPR88Q9GZN0 384 aa12.01□□□□□ -0.49
SNF8-207ENST00000509995 CSRNP2Q9H175 543 aa12.01□□□□□ -0.49
SNF8-207ENST00000509995 DIAPH3Q9NSV4 1193 aa12.01□□□□□ -0.49
SNF8-207ENST00000509995 KLK14Q9P0G3 267 aa12.01□□□□□ -0.49
SNF8-207ENST00000509995 INSL5Q9Y5Q6 135 aa12.01□□□□□ -0.49
SNF8-207ENST00000509995 BACE2Q9Y5Z0 518 aa12.01□□□□□ -0.49
SNF8-207ENST00000509995 MGAQ8IWI9 3026 aa12□□□□□ -0.49
SNF8-207ENST00000509995 PCDH15Q96QU1 1955 aa12□□□□□ -0.49
SNF8-207ENST00000509995 TEX15Q9BXT5 2789 aa12□□□□□ -0.49
SNF8-207ENST00000509995 BCKDHBP21953 392 aa12□□□□□ -0.49
SNF8-207ENST00000509995 ELF1P32519 619 aa12□□□□□ -0.49
SNF8-207ENST00000509995 DHPSP49366 369 aaPredicted RBP12□□□□□ -0.49
SNF8-207ENST00000509995 JAK3P52333 1124 aa12□□□□□ -0.49
SNF8-207ENST00000509995 EPHA5P54756 1037 aa12□□□□□ -0.49
SNF8-207ENST00000509995 SRSF1Q07955 248 aaKnown RBP eCLIP12□□□□□ -0.499e-7■■■■□ 24.1
SNF8-207ENST00000509995 GRSF1Q12849 480 aaKnown RBP eCLIP12□□□□□ -0.491e-7■■□□□ 11.4
SNF8-207ENST00000509995 PCBP1Q15365 356 aaKnown RBP eCLIP12□□□□□ -0.49
SNF8-207ENST00000509995 PRR16Q569H4 304 aa12□□□□□ -0.49
SNF8-207ENST00000509995 IQCEQ6IPM2 695 aa12□□□□□ -0.49
SNF8-207ENST00000509995 TCEAL8Q8IYN2 117 aa12□□□□□ -0.49
SNF8-207ENST00000509995 ELMOD1Q8N336 334 aa12□□□□□ -0.49
SNF8-207ENST00000509995 LEMD2Q8NC56 503 aa12□□□□□ -0.49
SNF8-207ENST00000509995 NCOA7Q8NI08 942 aa12□□□□□ -0.49
SNF8-207ENST00000509995 PRPF31Q8WWY3 499 aaKnown RBP12□□□□□ -0.49
SNF8-207ENST00000509995 PSPC1Q8WXF1 523 aaKnown RBP12□□□□□ -0.49
SNF8-207ENST00000509995 LENG9Q96B70 501 aa12□□□□□ -0.49
SNF8-207ENST00000509995 ASAH2Q9NR71 780 aa12□□□□□ -0.49
SNF8-207ENST00000509995 INVSQ9Y283 1065 aa12□□□□□ -0.49
SNF8-207ENST00000509995 TEP1Q99973 2627 aaKnown RBP11.99□□□□□ -0.49
SNF8-207ENST00000509995 ABLIM3O94929 683 aa11.99□□□□□ -0.49
SNF8-207ENST00000509995 CYP21A2P08686 494 aa11.99□□□□□ -0.49
SNF8-207ENST00000509995 FTH1P19P0C7X4 201 aa11.99□□□□□ -0.49
SNF8-207ENST00000509995 MYL4P12829 197 aa11.99□□□□□ -0.49
SNF8-207ENST00000509995 DGKEP52429 567 aa11.99□□□□□ -0.49
SNF8-207ENST00000509995 LAMTOR4Q0VGL1 99 aa11.99□□□□□ -0.49
SNF8-207ENST00000509995 SLC8B1Q6J4K2 584 aa11.99□□□□□ -0.49
SNF8-207ENST00000509995 ANKS3Q6ZW76 656 aa11.99□□□□□ -0.49
SNF8-207ENST00000509995 TMTC3Q6ZXV5 915 aa11.99□□□□□ -0.49
SNF8-207ENST00000509995 SYT13Q7L8C5 426 aa11.99□□□□□ -0.49
SNF8-207ENST00000509995 PNPLA1Q8N8W4 532 aa11.99□□□□□ -0.49
SNF8-207ENST00000509995 SHKBP1Q8TBC3 707 aa11.99□□□□□ -0.49
SNF8-207ENST00000509995 DDX27Q96GQ7 796 aaKnown RBP11.99□□□□□ -0.49
SNF8-207ENST00000509995 LRRC3BQ96PB8 259 aa11.99□□□□□ -0.49
SNF8-207ENST00000509995 GLT8D2Q9H1C3 349 aa11.99□□□□□ -0.49
SNF8-207ENST00000509995 UNC45AQ9H3U1 944 aa11.99□□□□□ -0.49
SNF8-207ENST00000509995 CYP4F11Q9HBI6 524 aa11.99□□□□□ -0.49
SNF8-207ENST00000509995 ZBTB47Q9UFB7 747 aaPredicted RBP11.99□□□□□ -0.49
SNF8-207ENST00000509995 MBD1Q9UIS9 605 aaPredicted RBP11.99□□□□□ -0.49
SNF8-207ENST00000509995 NBPF19A0A087WUL8 3843 aa11.98□□□□□ -0.49
SNF8-207ENST00000509995 TSC2P49815 1807 aa11.98□□□□□ -0.49
SNF8-207ENST00000509995 MUC22E2RYF6 1773 aaPredicted RBP11.98□□□□□ -0.49
SNF8-207ENST00000509995 CNTNAP5Q8WYK1 1306 aa11.98□□□□□ -0.49
SNF8-207ENST00000509995 SMCO2A6NFE2 343 aa11.98□□□□□ -0.49
SNF8-207ENST00000509995 GAS7O60861 476 aa11.98□□□□□ -0.49
SNF8-207ENST00000509995 SEC24AO95486 1093 aa11.98□□□□□ -0.49
SNF8-207ENST00000509995 EGFP01133 1207 aa11.98□□□□□ -0.49
SNF8-207ENST00000509995 PRKCBP05771 671 aa11.98□□□□□ -0.49
SNF8-207ENST00000509995 CALM1P0DP23 149 aa11.98□□□□□ -0.49
SNF8-207ENST00000509995 CALM2P0DP24 149 aa11.98□□□□□ -0.49
SNF8-207ENST00000509995 CALM3P0DP25 149 aa11.98□□□□□ -0.49
SNF8-207ENST00000509995 ATF2P15336 505 aa11.98□□□□□ -0.49
SNF8-207ENST00000509995 TKTP29401 623 aaKnown RBP11.98□□□□□ -0.49
SNF8-207ENST00000509995 PLCB2Q00722 1185 aa11.98□□□□□ -0.49
SNF8-207ENST00000509995 DMC1Q14565 340 aa11.98□□□□□ -0.49
SNF8-207ENST00000509995 TRIP6Q15654 476 aaKnown RBP11.98□□□□□ -0.49
SNF8-207ENST00000509995 MAPK6Q16659 721 aa11.98□□□□□ -0.49
SNF8-207ENST00000509995 ITPRIPL2Q3MIP1 535 aa11.98□□□□□ -0.49
SNF8-207ENST00000509995 USP39Q53GS9 565 aaKnown RBP11.98□□□□□ -0.49
SNF8-207ENST00000509995 ANKRD45Q5TZF3 282 aa11.98□□□□□ -0.49
SNF8-207ENST00000509995 JAKMIP3Q5VZ66 844 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms