RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 TMEM132AQ24JP5 1023 aa11.7□□□□□ -0.54
SEC31A-228ENST00000509142 C2CD6Q53TS8 623 aa11.7□□□□□ -0.54
SEC31A-228ENST00000509142 DENND2CQ68D51 928 aa11.7□□□□□ -0.54
SEC31A-228ENST00000509142 CCDC25Q86WR0 208 aa11.7□□□□□ -0.54
SEC31A-228ENST00000509142 PASD1Q8IV76 773 aa11.7□□□□□ -0.54
SEC31A-228ENST00000509142 CCDC50Q8IVM0 306 aa11.7□□□□□ -0.54
SEC31A-228ENST00000509142 ZNF516Q92618 1163 aa11.7□□□□□ -0.54
SEC31A-228ENST00000509142 PORCNQ9H237 461 aa11.7□□□□□ -0.54
SEC31A-228ENST00000509142 AZI2Q9H6S1 392 aa11.7□□□□□ -0.54
SEC31A-228ENST00000509142 FBXO40Q9UH90 709 aa11.7□□□□□ -0.54
SEC31A-228ENST00000509142 AFG3L2Q9Y4W6 797 aa11.7□□□□□ -0.54
SEC31A-228ENST00000509142 GLRA2P23416 452 aa11.7□□□□□ -0.54
SEC31A-228ENST00000509142 KCNJ1P48048 391 aa11.7□□□□□ -0.54
SEC31A-228ENST00000509142 IRX3P78415 501 aaPredicted RBP11.7□□□□□ -0.54
SEC31A-228ENST00000509142 SIX1Q15475 284 aaPredicted RBP11.7□□□□□ -0.54
SEC31A-228ENST00000509142 SGO2Q562F6 1265 aa11.7□□□□□ -0.54
SEC31A-228ENST00000509142 FAM160B1Q5W0V3 765 aa11.7□□□□□ -0.54
SEC31A-228ENST00000509142 UHMK1Q8TAS1 419 aaKnown RBP11.7□□□□□ -0.54
SEC31A-228ENST00000509142 TRIM11Q96F44 468 aa11.7□□□□□ -0.54
SEC31A-228ENST00000509142 GPRC5DQ9NZD1 345 aa11.7□□□□□ -0.54
SEC31A-228ENST00000509142 PASKQ96RG2 1323 aa11.7□□□□□ -0.54
SEC31A-228ENST00000509142 CLDN3O15551 220 aa11.69□□□□□ -0.54
SEC31A-228ENST00000509142 GBP1P32455 592 aa11.69□□□□□ -0.54
SEC31A-228ENST00000509142 SSTR3P32745 418 aaPredicted RBP11.69□□□□□ -0.54
SEC31A-228ENST00000509142 GJC1P36383 396 aa11.69□□□□□ -0.54
SEC31A-228ENST00000509142 STAT5BP51692 787 aa11.69□□□□□ -0.54
SEC31A-228ENST00000509142 PMS2P54278 862 aa11.69□□□□□ -0.54
SEC31A-228ENST00000509142 SNX1Q13596 522 aa11.69□□□□□ -0.54
SEC31A-228ENST00000509142 SLC29A2Q14542 456 aa11.69□□□□□ -0.54
SEC31A-228ENST00000509142 ZACNQ401N2 412 aa11.69□□□□□ -0.54
SEC31A-228ENST00000509142 SEZ6Q53EL9 994 aa11.69□□□□□ -0.54
SEC31A-228ENST00000509142 ZNF526Q8TF50 670 aaPredicted RBP11.69□□□□□ -0.54
SEC31A-228ENST00000509142 CD101Q93033 1021 aa11.69□□□□□ -0.54
SEC31A-228ENST00000509142 ZNF317Q96PQ6 595 aaPredicted RBP11.69□□□□□ -0.54
SEC31A-228ENST00000509142 GGA2Q9UJY4 613 aa11.69□□□□□ -0.54
SEC31A-228ENST00000509142 RRM1P23921 792 aa11.69□□□□□ -0.54
SEC31A-228ENST00000509142 COILP38432 576 aaPredicted RBP11.69□□□□□ -0.54
SEC31A-228ENST00000509142 EIF3BP55884 814 aaKnown RBP11.69□□□□□ -0.54
SEC31A-228ENST00000509142 FSTL1Q12841 308 aa11.69□□□□□ -0.54
SEC31A-228ENST00000509142 WDR78Q5VTH9 848 aa11.69□□□□□ -0.54
SEC31A-228ENST00000509142 TDRD10Q5VZ19 366 aaKnown RBP11.69□□□□□ -0.54
SEC31A-228ENST00000509142 HOOK3Q86VS8 718 aa11.69□□□□□ -0.54
SEC31A-228ENST00000509142 FAM228AQ86W67 206 aa11.69□□□□□ -0.54
SEC31A-228ENST00000509142 ATXN2LQ8WWM7 1075 aaKnown RBP11.69□□□□□ -0.54
SEC31A-228ENST00000509142 DDX1Q92499 740 aaKnown RBP11.69□□□□□ -0.54
SEC31A-228ENST00000509142 RUNDC3BQ96NL0 473 aa11.69□□□□□ -0.54
SEC31A-228ENST00000509142 C11orf70Q9BRQ4 267 aa11.69□□□□□ -0.54
SEC31A-228ENST00000509142 CD248Q9HCU0 757 aa11.69□□□□□ -0.54
SEC31A-228ENST00000509142 MAFBQ9Y5Q3 323 aaPredicted RBP11.69□□□□□ -0.54
SEC31A-228ENST00000509142 ECEL1O95672 775 aa11.69□□□□□ -0.54
SEC31A-228ENST00000509142 ALDH5A1P51649 535 aaPredicted RBP11.69□□□□□ -0.54
SEC31A-228ENST00000509142 PDE4CQ08493 712 aa11.69□□□□□ -0.54
SEC31A-228ENST00000509142 ERMARDQ5T6L9 678 aa11.69□□□□□ -0.54
SEC31A-228ENST00000509142 ZBTB33Q86T24 672 aa11.69□□□□□ -0.54
SEC31A-228ENST00000509142 ZNF677Q86XU0 584 aa11.69□□□□□ -0.54
SEC31A-228ENST00000509142 MCOLN2Q8IZK6 566 aa11.69□□□□□ -0.54
SEC31A-228ENST00000509142 C1orf54Q8WWF1 131 aa11.69□□□□□ -0.54
SEC31A-228ENST00000509142 ASIC3Q9UHC3 531 aa11.69□□□□□ -0.54
SEC31A-228ENST00000509142 USTQ9Y2C2 406 aa11.69□□□□□ -0.54
SEC31A-228ENST00000509142 MYH9P35579 1960 aaKnown RBP11.68□□□□□ -0.54
SEC31A-228ENST00000509142 THAP12O43422 761 aa11.68□□□□□ -0.54
SEC31A-228ENST00000509142 KIAA0754O94854 1291 aa11.68□□□□□ -0.54
SEC31A-228ENST00000509142 NUDT17P0C025 328 aa11.68□□□□□ -0.54
SEC31A-228ENST00000509142 RARAP10276 462 aa11.68□□□□□ -0.54
SEC31A-228ENST00000509142 ATP4AP20648 1035 aa11.68□□□□□ -0.54
SEC31A-228ENST00000509142 CTNNA2P26232 953 aa11.68□□□□□ -0.54
SEC31A-228ENST00000509142 MARK3P27448 753 aa11.68□□□□□ -0.54
SEC31A-228ENST00000509142 GNA15P30679 374 aa11.68□□□□□ -0.54
SEC31A-228ENST00000509142 NEDD9Q14511 834 aa11.68□□□□□ -0.54
SEC31A-228ENST00000509142 SWT1Q5T5J6 900 aaKnown RBP11.68□□□□□ -0.54
SEC31A-228ENST00000509142 SPATS2Q86XZ4 545 aaKnown RBP11.68□□□□□ -0.54
SEC31A-228ENST00000509142 PABPC3Q9H361 631 aaKnown RBP11.68□□□□□ -0.54
SEC31A-228ENST00000509142 DHX33Q9H6R0 707 aaKnown RBP11.68□□□□□ -0.54
SEC31A-228ENST00000509142 ADAM22Q9P0K1 906 aa11.68□□□□□ -0.54
SEC31A-228ENST00000509142 PCYOX1Q9UHG3 505 aa11.68□□□□□ -0.54
SEC31A-228ENST00000509142 PPP2R3BQ9Y5P8 575 aa11.68□□□□□ -0.54
SEC31A-228ENST00000509142 MYPNQ86TC9 1320 aa11.68□□□□□ -0.54
SEC31A-228ENST00000509142 KIAA1217Q5T5P2 1943 aa11.68□□□□□ -0.54
SEC31A-228ENST00000509142 FOXO6A8MYZ6 492 aa11.68□□□□□ -0.54
SEC31A-228ENST00000509142 NOP56O00567 594 aaKnown RBP11.68□□□□□ -0.54
SEC31A-228ENST00000509142 SRGAP2CP0DJJ0 459 aa11.68□□□□□ -0.54
SEC31A-228ENST00000509142 MYBL1P10243 752 aa11.68□□□□□ -0.54
SEC31A-228ENST00000509142 UBA1P22314 1058 aaKnown RBP11.68□□□□□ -0.54
SEC31A-228ENST00000509142 CUL2Q13617 745 aa11.68□□□□□ -0.54
SEC31A-228ENST00000509142 TREML2Q5T2D2 321 aa11.68□□□□□ -0.54
SEC31A-228ENST00000509142 IPO4Q8TEX9 1081 aaKnown RBP11.68□□□□□ -0.54
SEC31A-228ENST00000509142 CD2APQ9Y5K6 639 aa11.68□□□□□ -0.54
SEC31A-228ENST00000509142 LTBP3Q9NS15 1303 aa11.68□□□□□ -0.54
SEC31A-228ENST00000509142 C4BPAP04003 597 aaKnown RBP11.68□□□□□ -0.54
SEC31A-228ENST00000509142 CHN1P15882 459 aa11.68□□□□□ -0.54
SEC31A-228ENST00000509142 ICAM3P32942 547 aa11.68□□□□□ -0.54
SEC31A-228ENST00000509142 RFC5P40937 340 aa11.68□□□□□ -0.54
SEC31A-228ENST00000509142 DRG2P55039 364 aaKnown RBP11.68□□□□□ -0.54
SEC31A-228ENST00000509142 VGLL4Q14135 290 aa11.68□□□□□ -0.54
SEC31A-228ENST00000509142 R3HDM1Q15032 1099 aaKnown RBP11.68□□□□□ -0.54
SEC31A-228ENST00000509142 ANKRD20A8PQ5CZ79 823 aa11.68□□□□□ -0.54
SEC31A-228ENST00000509142 EPS8L3Q8TE67 593 aaKnown RBP11.68□□□□□ -0.54
SEC31A-228ENST00000509142 MAIP1Q8WWC4 291 aa11.68□□□□□ -0.54
SEC31A-228ENST00000509142 CCDC114Q96M63 670 aa11.68□□□□□ -0.54
SEC31A-228ENST00000509142 HERPUD2Q9BSE4 406 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms