RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 LONP1P36776 959 aaKnown RBP13.66□□□□□ -0.22
PDPN-208ENST00000509009 NCKAP1LP55160 1127 aa13.66□□□□□ -0.22
PDPN-208ENST00000509009 GRIN1Q05586 938 aa13.66□□□□□ -0.22
PDPN-208ENST00000509009 CUL4AQ13619 759 aa13.66□□□□□ -0.22
PDPN-208ENST00000509009 HTR4Q13639 388 aa13.66□□□□□ -0.22
PDPN-208ENST00000509009 MRPL58Q14197 206 aaKnown RBP13.66□□□□□ -0.22
PDPN-208ENST00000509009 DHX8Q14562 1220 aaKnown RBP13.66□□□□□ -0.22
PDPN-208ENST00000509009 NOLC1Q14978 699 aaKnown RBP eCLIP13.66□□□□□ -0.22
PDPN-208ENST00000509009 VARS2Q5ST30 1063 aaKnown RBP13.66□□□□□ -0.22
PDPN-208ENST00000509009 SLC8B1Q6J4K2 584 aa13.66□□□□□ -0.22
PDPN-208ENST00000509009 HAUS6Q7Z4H7 955 aa13.66□□□□□ -0.22
PDPN-208ENST00000509009 BRAPQ7Z569 592 aa13.66□□□□□ -0.22
PDPN-208ENST00000509009 ZNF461Q8TAF7 563 aa13.66□□□□□ -0.22
PDPN-208ENST00000509009 ITFG1Q8TB96 612 aa13.66□□□□□ -0.22
PDPN-208ENST00000509009 SLC7A14Q8TBB6 771 aa13.66□□□□□ -0.22
PDPN-208ENST00000509009 KCNN1Q92952 543 aa13.66□□□□□ -0.22
PDPN-208ENST00000509009 ANKFY1Q9P2R3 1169 aa13.66□□□□□ -0.22
PDPN-208ENST00000509009 DNMT3BQ9UBC3 853 aaKnown RBP13.66□□□□□ -0.22
PDPN-208ENST00000509009 CDH7Q9ULB5 785 aa13.66□□□□□ -0.22
PDPN-208ENST00000509009 POLIQ9UNA4 740 aa13.66□□□□□ -0.22
PDPN-208ENST00000509009 VWA8A3KMH1 1905 aa13.65□□□□□ -0.22
PDPN-208ENST00000509009 H0YCG3 227 aa13.65□□□□□ -0.22
PDPN-208ENST00000509009 SYN3O14994 580 aa13.65□□□□□ -0.22
PDPN-208ENST00000509009 BMP15O95972 392 aa13.65□□□□□ -0.22
PDPN-208ENST00000509009 CLTAP09496 248 aa13.65□□□□□ -0.22
PDPN-208ENST00000509009 MCM6Q14566 821 aa13.65□□□□□ -0.22
PDPN-208ENST00000509009 SF3A1Q15459 793 aaKnown RBP13.65□□□□□ -0.22
PDPN-208ENST00000509009 ZBTB6Q15916 424 aa13.65□□□□□ -0.22
PDPN-208ENST00000509009 PARM1Q6UWI2 310 aa13.65□□□□□ -0.22
PDPN-208ENST00000509009 GPBP1Q86WP2 473 aa13.65□□□□□ -0.22
PDPN-208ENST00000509009 MYCT1Q8N699 235 aa13.65□□□□□ -0.22
PDPN-208ENST00000509009 FGF13Q92913 245 aa13.65□□□□□ -0.22
PDPN-208ENST00000509009 SUSD3Q96L08 255 aa13.65□□□□□ -0.22
PDPN-208ENST00000509009 RTP3Q9BQQ7 232 aa13.65□□□□□ -0.22
PDPN-208ENST00000509009 REEP2Q9BRK0 252 aa13.65□□□□□ -0.22
PDPN-208ENST00000509009 PLEKHA5Q9HAU0 1116 aa13.65□□□□□ -0.22
PDPN-208ENST00000509009 HCFC1R1Q9NWW0 138 aa13.65□□□□□ -0.22
PDPN-208ENST00000509009 ODF2LQ9ULJ1 636 aa13.65□□□□□ -0.22
PDPN-208ENST00000509009 NUB1Q9Y5A7 615 aa13.65□□□□□ -0.22
PDPN-208ENST00000509009 NUMBLQ9Y6R0 609 aa13.65□□□□□ -0.22
PDPN-208ENST00000509009 TTC26A0AVF1 554 aa13.64□□□□□ -0.23
PDPN-208ENST00000509009 ARHGEF37A1IGU5 675 aa13.64□□□□□ -0.23
PDPN-208ENST00000509009 STK25O00506 426 aa13.64□□□□□ -0.23
PDPN-208ENST00000509009 PLCG1P19174 1290 aa13.64□□□□□ -0.23
PDPN-208ENST00000509009 DDIT3P35638 169 aa13.64□□□□□ -0.23
PDPN-208ENST00000509009 MATR3P43243 847 aaKnown RBP eCLIP13.64□□□□□ -0.23
PDPN-208ENST00000509009 ZNF131P52739 623 aa13.64□□□□□ -0.23
PDPN-208ENST00000509009 GPC5P78333 572 aa13.64□□□□□ -0.23
PDPN-208ENST00000509009 ROR1Q01973 937 aa13.64□□□□□ -0.23
PDPN-208ENST00000509009 KARSQ15046 597 aaKnown RBP13.64□□□□□ -0.23
PDPN-208ENST00000509009 TMEM130Q8N3G9 435 aa13.64□□□□□ -0.23
PDPN-208ENST00000509009 GPR152Q8TDT2 470 aa13.64□□□□□ -0.23
PDPN-208ENST00000509009 RAD54LQ92698 747 aa13.64□□□□□ -0.23
PDPN-208ENST00000509009 FGF14Q92915 247 aa13.64□□□□□ -0.23
PDPN-208ENST00000509009 SLC2A4RGQ9NR83 387 aa13.64□□□□□ -0.23
PDPN-208ENST00000509009 FBXL5Q9UKA1 691 aa13.64□□□□□ -0.23
PDPN-208ENST00000509009 KCNH3Q9ULD8 1083 aa13.64□□□□□ -0.23
PDPN-208ENST00000509009 TBX20Q9UMR3 447 aa13.64□□□□□ -0.23
PDPN-208ENST00000509009 WDR27A2RRH5 827 aa13.63□□□□□ -0.23
PDPN-208ENST00000509009 LACTBL1A8MY62 500 aa13.63□□□□□ -0.23
PDPN-208ENST00000509009 PROB1E7EW31 1015 aa13.63□□□□□ -0.23
PDPN-208ENST00000509009 H7C4K7 107 aa13.63□□□□□ -0.23
PDPN-208ENST00000509009 FAM13AO94988 1023 aa13.63□□□□□ -0.23
PDPN-208ENST00000509009 SEC24AO95486 1093 aa13.63□□□□□ -0.23
PDPN-208ENST00000509009 PIGRP01833 764 aa13.63□□□□□ -0.23
PDPN-208ENST00000509009 ADRB2P07550 413 aa13.63□□□□□ -0.23
PDPN-208ENST00000509009 CXCL8P10145 99 aa13.63□□□□□ -0.23
PDPN-208ENST00000509009 ATF2P15336 505 aa13.63□□□□□ -0.23
PDPN-208ENST00000509009 SCP2P22307 547 aa13.63□□□□□ -0.23
PDPN-208ENST00000509009 ELF1P32519 619 aa13.63□□□□□ -0.23
PDPN-208ENST00000509009 TNFSF9P41273 254 aa13.63□□□□□ -0.23
PDPN-208ENST00000509009 ARPP19P56211 112 aa13.63□□□□□ -0.23
PDPN-208ENST00000509009 SPAG1Q07617 926 aa13.63□□□□□ -0.23
PDPN-208ENST00000509009 PABPC1LQ4VXU2 614 aaKnown RBP13.63□□□□□ -0.23
PDPN-208ENST00000509009 USP49Q70CQ1 688 aa13.63□□□□□ -0.23
PDPN-208ENST00000509009 TCEAL8Q8IYN2 117 aa13.63□□□□□ -0.23
PDPN-208ENST00000509009 DTWD2Q8NBA8 298 aa13.63□□□□□ -0.23
PDPN-208ENST00000509009 DDX12PQ92771 950 aa13.63□□□□□ -0.23
PDPN-208ENST00000509009 BICD1Q96G01 975 aa13.63□□□□□ -0.23
PDPN-208ENST00000509009 FIZ1Q96SL8 496 aa13.63□□□□□ -0.23
PDPN-208ENST00000509009 CCSER1Q9C0I3 900 aa13.63□□□□□ -0.23
PDPN-208ENST00000509009 PARVGQ9HBI0 331 aa13.63□□□□□ -0.23
PDPN-208ENST00000509009 AVENQ9NQS1 362 aaPredicted RBP13.63□□□□□ -0.23
PDPN-208ENST00000509009 TUBGCP4Q9UGJ1 667 aa13.63□□□□□ -0.23
PDPN-208ENST00000509009 CA14Q9ULX7 337 aa13.63□□□□□ -0.23
PDPN-208ENST00000509009 CLIC4Q9Y696 253 aa13.63□□□□□ -0.23
PDPN-208ENST00000509009 USP34Q70CQ2 3546 aa13.63□□□□□ -0.23
PDPN-208ENST00000509009 A0A0B4J269 797 aa13.62□□□□□ -0.23
PDPN-208ENST00000509009 OGTO15294 1046 aa13.62□□□□□ -0.23
PDPN-208ENST00000509009 TRAK2O60296 914 aa13.62□□□□□ -0.23
PDPN-208ENST00000509009 FAM189A1O60320 539 aa13.62□□□□□ -0.23
PDPN-208ENST00000509009 RHOP08100 348 aa13.62□□□□□ -0.23
PDPN-208ENST00000509009 PTPN2P17706 415 aa13.62□□□□□ -0.23
PDPN-208ENST00000509009 CYP3A5P20815 502 aa13.62□□□□□ -0.23
PDPN-208ENST00000509009 MARCKSP29966 332 aaPredicted RBP13.62□□□□□ -0.23
PDPN-208ENST00000509009 LRPAP1P30533 357 aa13.62□□□□□ -0.23
PDPN-208ENST00000509009 MCM4P33991 863 aa13.62□□□□□ -0.23
PDPN-208ENST00000509009 LIG4P49917 911 aa13.62□□□□□ -0.23
PDPN-208ENST00000509009 GTF2BQ00403 316 aa13.62□□□□□ -0.23
PDPN-208ENST00000509009 PTPAQ15257 358 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms