RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 MSCO60682 206 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 GH1P01241 217 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 MYZAPP0CAP1 466 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 ITGA4P13612 1032 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 ECHS1P30084 290 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 GBP1P32455 592 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 GNGT1P63211 74 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 MKRN4PQ13434 485 aaPredicted RBP12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 GRB14Q14449 540 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 CRELD2Q6UXH1 353 aaPredicted RBP12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 KDM7AQ6ZMT4 941 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 PALB2Q86YC2 1186 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 HELQQ8TDG4 1101 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 TAS1R2Q8TE23 839 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 SEMA4DQ92854 862 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 ATP6V1G3Q96LB4 118 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 KATNBL1Q9H079 304 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 FAM107BQ9H098 131 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 PDGFCQ9NRA1 345 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 ERAP1Q9NZ08 941 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 NOCTQ9UK39 431 aaKnown RBP12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 PLXNA1Q9UIW2 1896 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 TTI1O43156 1089 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 MAPK4P31152 587 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 HSD17B3P37058 310 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 AP3M2P53677 418 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 DR1Q01658 176 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 POU5F1BQ06416 359 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 LAMTOR4Q0VGL1 99 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 IRF5Q13568 498 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 TFDP1Q14186 410 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 ZACNQ401N2 412 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 ZNF484Q5JVG2 852 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 SPDYCQ5MJ68 293 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 SEL1L2Q5TEA6 688 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 DCAF12L1Q5VU92 463 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 RUFY4Q6ZNE9 571 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 SRLQ86TD4 932 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 ZBTB8OSQ8IWT0 167 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 ARFGAP2Q8N6H7 521 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 PIK3R5Q8WYR1 880 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 COPS5Q92905 334 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 KREMEN1Q96MU8 473 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 FNBP1Q96RU3 617 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 POP1Q99575 1024 aaKnown RBP12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 ZSWIM1Q9BR11 485 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 MSTO1Q9BUK6 570 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 TARS2Q9BW92 718 aaKnown RBP12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 MRPL4Q9BYD3 311 aaKnown RBP12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 NFKBIZQ9BYH8 718 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 HAPLN2Q9GZV7 340 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 WNT8AQ9H1J5 351 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 ZFYVE28Q9HCC9 887 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 RSPH14Q9UHP6 348 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 CPA4Q9UI42 421 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 COG5Q9UP83 839 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 RRP15Q9Y3B9 282 aaKnown RBP12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 ALG6Q9Y672 507 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 ZNF236Q9UL36 1845 aa12.38□□□□□ -0.43
PRPF40B-203ENST00000508736 TULP2O00295 520 aa12.37□□□□□ -0.43
PRPF40B-203ENST00000508736 DAPK3O43293 454 aa12.37□□□□□ -0.43
PRPF40B-203ENST00000508736 TOM1L1O75674 476 aa12.37□□□□□ -0.43
PRPF40B-203ENST00000508736 TRPA1O75762 1119 aa12.37□□□□□ -0.43
PRPF40B-203ENST00000508736 SGPL1O95470 568 aa12.37□□□□□ -0.43
PRPF40B-203ENST00000508736 ALDH1A1P00352 501 aa12.37□□□□□ -0.43
PRPF40B-203ENST00000508736 C4BPAP04003 597 aaKnown RBP12.37□□□□□ -0.43
PRPF40B-203ENST00000508736 DLATP10515 647 aaKnown RBP12.37□□□□□ -0.43
PRPF40B-203ENST00000508736 NR1D1P20393 614 aa12.37□□□□□ -0.43
PRPF40B-203ENST00000508736 CTNNA1P35221 906 aaKnown RBP12.37□□□□□ -0.43
PRPF40B-203ENST00000508736 NLRP11P59045 1033 aaKnown RBP12.37□□□□□ -0.43
PRPF40B-203ENST00000508736 CRHR2Q13324 411 aa12.37□□□□□ -0.43
PRPF40B-203ENST00000508736 DRP2Q13474 957 aa12.37□□□□□ -0.43
PRPF40B-203ENST00000508736 BIRC3Q13489 604 aa12.37□□□□□ -0.43
PRPF40B-203ENST00000508736 TRADDQ15628 312 aa12.37□□□□□ -0.43
PRPF40B-203ENST00000508736 DNAJC21Q5F1R6 531 aaKnown RBP12.37□□□□□ -0.43
PRPF40B-203ENST00000508736 CEP85LQ5SZL2 805 aa12.37□□□□□ -0.43
PRPF40B-203ENST00000508736 EMC10Q5UCC4 262 aa12.37□□□□□ -0.43
PRPF40B-203ENST00000508736 GPR142Q7Z601 462 aa12.37□□□□□ -0.43
PRPF40B-203ENST00000508736 NOP9Q86U38 636 aaKnown RBP12.37□□□□□ -0.43
PRPF40B-203ENST00000508736 TRIM50Q86XT4 487 aa12.37□□□□□ -0.43
PRPF40B-203ENST00000508736 EFCAB13Q8IY85 973 aa12.37□□□□□ -0.43
PRPF40B-203ENST00000508736 PPTC7Q8NI37 304 aa12.37□□□□□ -0.43
PRPF40B-203ENST00000508736 RUNDC3BQ96NL0 473 aa12.37□□□□□ -0.43
PRPF40B-203ENST00000508736 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.37□□□□□ -0.43
PRPF40B-203ENST00000508736 RBAKQ9NYW8 714 aaPredicted RBP12.37□□□□□ -0.43
PRPF40B-203ENST00000508736 UVRAGQ9P2Y5 699 aa12.37□□□□□ -0.43
PRPF40B-203ENST00000508736 GTF3C4Q9UKN8 822 aa12.37□□□□□ -0.43
PRPF40B-203ENST00000508736 TRPC6Q9Y210 931 aa12.37□□□□□ -0.43
PRPF40B-203ENST00000508736 MCM3APO60318 1980 aa12.37□□□□□ -0.43
PRPF40B-203ENST00000508736 COL1A2P08123 1366 aa12.37□□□□□ -0.43
PRPF40B-203ENST00000508736 CLDN3O15551 220 aa12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 CYP26A1O43174 497 aa12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 CA12O43570 354 aa12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 PHF2O75151 1096 aa12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 MARK3P27448 753 aa12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 CHRNA3P32297 505 aa12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 CDR2Q01850 454 aa12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 MAPK6Q16659 721 aa12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 KCTD16Q68DU8 428 aa12.36□□□□□ -0.43
PRPF40B-203ENST00000508736 ZNF516Q92618 1163 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms