RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 ABHD14A-ACY1A0A1B0GW23 586 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 B4E1Z4 1266 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 KLRF2D3W0D1 207 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 H0Y8X5 98 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 SMIM22K7EJ46 135 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 ZBTB5O15062 677 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 SUSD5O60279 629 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 LPXNO60711 386 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 PPFIA4O75335 1185 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 STAM2O75886 525 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 CD4P01730 458 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 RPLP2P05387 115 aaKnown RBP4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 CA3P07451 260 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 MMP3P08254 477 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 IQCF3P0C7M6 154 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 CALM1P0DP23 149 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 CALM2P0DP24 149 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 CALM3P0DP25 149 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 TGFB3P10600 412 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 NAT2P11245 290 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 CTSKP43235 329 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 RABGGTBP53611 331 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 EPHB4P54760 987 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 PCBP3P57721 371 aaKnown RBP4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 LY6KQ17RY6 165 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 KIAA0753Q2KHM9 967 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 SV2CQ496J9 727 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 SPOUT1Q5T280 376 aaKnown RBP4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 CWF19L1Q69YN2 538 aaKnown RBP4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 CCSAPQ6IQ19 270 aaPredicted RBP4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 TAPT1Q6NXT6 567 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 CNKSR3Q6P9H4 555 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 BTNL9Q6UXG8 535 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 HERC6Q8IVU3 1022 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 ADGRF4Q8IZF3 695 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 ABI1Q8IZP0 508 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 TMTC2Q8N394 836 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 AFG1LQ8WV93 481 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 GLG1Q92896 1179 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 ATP6V0A1Q93050 837 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 FAM122AQ96E09 287 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 UIMC1Q96RL1 719 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 YME1L1Q96TA2 773 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 LZTS2Q9BRK4 669 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 AZI2Q9H6S1 392 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 INCENPQ9NQS7 918 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 IL17RBQ9NRM6 502 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 PRR13Q9NZ81 148 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 SLAMF8Q9P0V8 285 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 SUSD2Q9UGT4 822 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 TCFL5Q9UL49 500 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 MTUS1Q9ULD2 1270 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 SF3B6Q9Y3B4 125 aaKnown RBP4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 RWDD3Q9Y3V2 267 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 INSL6Q9Y581 213 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 FHOD1Q9Y613 1164 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 MYH4Q9Y623 1939 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 FRMPD3Q5JV73 1810 aa4.3□□□□□ -1.72
HMGN1P11-201ENST00000508668 ALPK3Q96L96 1907 aa4.29□□□□□ -1.72
HMGN1P11-201ENST00000508668 RSPH10B2B2RC85 870 aa4.29□□□□□ -1.72
HMGN1P11-201ENST00000508668 NCK2O43639 380 aa4.29□□□□□ -1.72
HMGN1P11-201ENST00000508668 GGPS1O95749 300 aa4.29□□□□□ -1.72
HMGN1P11-201ENST00000508668 GSNP06396 782 aa4.29□□□□□ -1.72
HMGN1P11-201ENST00000508668 RSPH10BP0C881 870 aa4.29□□□□□ -1.72
HMGN1P11-201ENST00000508668 SRGAP2BP0DMP2 458 aa4.29□□□□□ -1.72
HMGN1P11-201ENST00000508668 IBSPP21815 317 aaPredicted RBP4.29□□□□□ -1.72
HMGN1P11-201ENST00000508668 ITGB8P26012 769 aa4.29□□□□□ -1.72
HMGN1P11-201ENST00000508668 RPL10P27635 214 aaKnown RBP4.29□□□□□ -1.72
HMGN1P11-201ENST00000508668 NKX3-2P78367 333 aa4.29□□□□□ -1.72
HMGN1P11-201ENST00000508668 AKAP17AQ02040 695 aaKnown RBP4.29□□□□□ -1.72
HMGN1P11-201ENST00000508668 SP4Q02446 784 aa4.29□□□□□ -1.72
HMGN1P11-201ENST00000508668 RBL2Q08999 1139 aa4.29□□□□□ -1.72
HMGN1P11-201ENST00000508668 BMS1Q14692 1282 aaKnown RBP4.29□□□□□ -1.72
HMGN1P11-201ENST00000508668 QRICH1Q2TAL8 776 aa4.29□□□□□ -1.72
HMGN1P11-201ENST00000508668 RALGPS1Q5JS13 557 aa4.29□□□□□ -1.72
HMGN1P11-201ENST00000508668 ODR4Q5SWX8 454 aa4.29□□□□□ -1.72
HMGN1P11-201ENST00000508668 MYOCDQ8IZQ8 938 aa4.29□□□□□ -1.72
HMGN1P11-201ENST00000508668 PPTC7Q8NI37 304 aa4.29□□□□□ -1.72
HMGN1P11-201ENST00000508668 OTUD7AQ8TE49 926 aaPredicted RBP4.29□□□□□ -1.72
HMGN1P11-201ENST00000508668 PIBF1Q8WXW3 757 aa4.29□□□□□ -1.72
HMGN1P11-201ENST00000508668 APBB2Q92870 758 aa4.29□□□□□ -1.72
HMGN1P11-201ENST00000508668 SAMD11Q96NU1 681 aa4.29□□□□□ -1.72
HMGN1P11-201ENST00000508668 ALPK1Q96QP1 1244 aa4.29□□□□□ -1.72
HMGN1P11-201ENST00000508668 TGS1Q96RS0 853 aaKnown RBP4.29□□□□□ -1.72
HMGN1P11-201ENST00000508668 RAD9AQ99638 391 aa4.29□□□□□ -1.72
HMGN1P11-201ENST00000508668 SDF4Q9BRK5 362 aa4.29□□□□□ -1.72
HMGN1P11-201ENST00000508668 LGR4Q9BXB1 951 aa4.29□□□□□ -1.72
HMGN1P11-201ENST00000508668 UPF3BQ9BZI7 483 aaKnown RBP4.29□□□□□ -1.72
HMGN1P11-201ENST00000508668 LMCD1Q9NZU5 365 aa4.29□□□□□ -1.72
HMGN1P11-201ENST00000508668 CGGBP1Q9UFW8 167 aaPredicted RBP4.29□□□□□ -1.72
HMGN1P11-201ENST00000508668 ADAMTS6Q9UKP5 1117 aa4.29□□□□□ -1.72
HMGN1P11-201ENST00000508668 OAS3Q9Y6K5 1087 aaKnown RBP4.29□□□□□ -1.72
HMGN1P11-201ENST00000508668 COL11A1P12107 1806 aaPredicted RBP4.29□□□□□ -1.72
HMGN1P11-201ENST00000508668 RLFQ13129 1914 aa4.29□□□□□ -1.72
HMGN1P11-201ENST00000508668 ZNFX1Q9P2E3 1918 aaKnown RBP4.29□□□□□ -1.72
HMGN1P11-201ENST00000508668 NEDD4P46934 1319 aa4.28□□□□□ -1.72
HMGN1P11-201ENST00000508668 FIBPO43427 364 aa4.28□□□□□ -1.72
HMGN1P11-201ENST00000508668 CAND2O75155 1236 aa4.28□□□□□ -1.72
HMGN1P11-201ENST00000508668 CD3EP07766 207 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms