RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 NOLC1Q14978 699 aaKnown RBP eCLIP17.72■□□□□ 0.43
LMNA-222ENST00000508500 SPECC1Q5M775 1068 aa17.72■□□□□ 0.43
LMNA-222ENST00000508500 ZBTB41Q5SVQ8 909 aa17.72■□□□□ 0.43
LMNA-222ENST00000508500 CWF19L1Q69YN2 538 aaKnown RBP17.72■□□□□ 0.43
LMNA-222ENST00000508500 PDXDC1Q6P996 788 aa17.72■□□□□ 0.43
LMNA-222ENST00000508500 GET4Q7L5D6 327 aaPredicted RBP17.72■□□□□ 0.43
LMNA-222ENST00000508500 SLC44A3Q8N4M1 653 aa17.72■□□□□ 0.43
LMNA-222ENST00000508500 STAMQ92783 540 aa17.72■□□□□ 0.43
LMNA-222ENST00000508500 CALML4Q96GE6 196 aa17.72■□□□□ 0.43
LMNA-222ENST00000508500 EPSTI1Q96J88 318 aa17.72■□□□□ 0.43
LMNA-222ENST00000508500 SLC38A7Q9NVC3 462 aa17.72■□□□□ 0.43
LMNA-222ENST00000508500 LARSQ9P2J5 1176 aaKnown RBP17.72■□□□□ 0.43
LMNA-222ENST00000508500 TUBGCP4Q9UGJ1 667 aa17.72■□□□□ 0.43
LMNA-222ENST00000508500 KCNG1Q9UIX4 513 aa17.72■□□□□ 0.43
LMNA-222ENST00000508500 COL4A3Q01955 1670 aa17.71■□□□□ 0.43
LMNA-222ENST00000508500 CLDN3O15551 220 aa17.71■□□□□ 0.43
LMNA-222ENST00000508500 BMP15O95972 392 aa17.71■□□□□ 0.43
LMNA-222ENST00000508500 HNRNPA1P09651 372 aaKnown RBP eCLIP17.71■□□□□ 0.43
LMNA-222ENST00000508500 CXCL8P10145 99 aa17.71■□□□□ 0.43
LMNA-222ENST00000508500 SYT1P21579 422 aa17.71■□□□□ 0.43
LMNA-222ENST00000508500 MRPL58Q14197 206 aaKnown RBP17.71■□□□□ 0.43
LMNA-222ENST00000508500 ZBTB6Q15916 424 aa17.71■□□□□ 0.43
LMNA-222ENST00000508500 PPM1LQ5SGD2 360 aa17.71■□□□□ 0.43
LMNA-222ENST00000508500 VARS2Q5ST30 1063 aaKnown RBP17.71■□□□□ 0.43
LMNA-222ENST00000508500 AXDND1Q5T1B0 1012 aaPredicted RBP17.71■□□□□ 0.43
LMNA-222ENST00000508500 SLC39A4Q6P5W5 647 aa17.71■□□□□ 0.43
LMNA-222ENST00000508500 POTEHQ6S545 545 aa17.71■□□□□ 0.43
LMNA-222ENST00000508500 SLC7A14Q8TBB6 771 aa17.71■□□□□ 0.43
LMNA-222ENST00000508500 RPP25Q9BUL9 199 aaKnown RBP17.71■□□□□ 0.43
LMNA-222ENST00000508500 CCSER1Q9C0I3 900 aa17.71■□□□□ 0.43
LMNA-222ENST00000508500 IRF2BPLQ9H1B7 796 aa17.71■□□□□ 0.43
LMNA-222ENST00000508500 HCFC1R1Q9NWW0 138 aa17.71■□□□□ 0.43
LMNA-222ENST00000508500 FBXO2Q9UK22 296 aaPredicted RBP17.71■□□□□ 0.43
LMNA-222ENST00000508500 TBX20Q9UMR3 447 aa17.71■□□□□ 0.43
LMNA-222ENST00000508500 DCHS1Q96JQ0 3298 aa17.71■□□□□ 0.43
LMNA-222ENST00000508500 SPTBN4Q9H254 2564 aa17.71■□□□□ 0.43
LMNA-222ENST00000508500 TTC26A0AVF1 554 aa17.7■□□□□ 0.42
LMNA-222ENST00000508500 ANHXE9PGG2 379 aa17.7■□□□□ 0.42
LMNA-222ENST00000508500 H0Y858 1186 aa17.7■□□□□ 0.42
LMNA-222ENST00000508500 TRAPPC3O43617 180 aa17.7■□□□□ 0.42
LMNA-222ENST00000508500 PI15O43692 258 aa17.7■□□□□ 0.42
LMNA-222ENST00000508500 GFRA3O60609 400 aa17.7■□□□□ 0.42
LMNA-222ENST00000508500 PIGRP01833 764 aa17.7■□□□□ 0.42
LMNA-222ENST00000508500 MARCKSP29966 332 aaPredicted RBP17.7■□□□□ 0.42
LMNA-222ENST00000508500 HOXA9P31269 272 aa17.7■□□□□ 0.42
LMNA-222ENST00000508500 RPL9P32969 192 aaKnown RBP17.7■□□□□ 0.42
LMNA-222ENST00000508500 ROR1Q01973 937 aa17.7■□□□□ 0.42
LMNA-222ENST00000508500 LIN9Q5TKA1 542 aa17.7■□□□□ 0.42
LMNA-222ENST00000508500 SLC8B1Q6J4K2 584 aa17.7■□□□□ 0.42
LMNA-222ENST00000508500 ANKS3Q6ZW76 656 aa17.7■□□□□ 0.42
LMNA-222ENST00000508500 MYCT1Q8N699 235 aa17.7■□□□□ 0.42
LMNA-222ENST00000508500 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.7■□□□□ 0.42
LMNA-222ENST00000508500 DNMT3BQ9UBC3 853 aaKnown RBP17.7■□□□□ 0.42
LMNA-222ENST00000508500 MIA3Q5JRA6 1907 aa17.7■□□□□ 0.42
LMNA-222ENST00000508500 FAM186AA6NE01 2351 aa17.69■□□□□ 0.42
LMNA-222ENST00000508500 WDR27A2RRH5 827 aa17.69■□□□□ 0.42
LMNA-222ENST00000508500 KRBA1A5PL33 1030 aa17.69■□□□□ 0.42
LMNA-222ENST00000508500 TRAK2O60296 914 aa17.69■□□□□ 0.42
LMNA-222ENST00000508500 ABLIM3O94929 683 aa17.69■□□□□ 0.42
LMNA-222ENST00000508500 CLTAP09496 248 aa17.69■□□□□ 0.42
LMNA-222ENST00000508500 FSHRP23945 695 aa17.69■□□□□ 0.42
LMNA-222ENST00000508500 NMT1P30419 496 aaKnown RBP17.69■□□□□ 0.42
LMNA-222ENST00000508500 DDIT3P35638 169 aa17.69■□□□□ 0.42
LMNA-222ENST00000508500 NBL1P41271 181 aa17.69■□□□□ 0.42
LMNA-222ENST00000508500 HTR4Q13639 388 aa17.69■□□□□ 0.42
LMNA-222ENST00000508500 UVSSAQ2YD98 709 aa17.69■□□□□ 0.42
LMNA-222ENST00000508500 ASTLQ6HA08 431 aaPredicted RBP17.69■□□□□ 0.42
LMNA-222ENST00000508500 ITFG1Q8TB96 612 aa17.69■□□□□ 0.42
LMNA-222ENST00000508500 LARP4BQ92615 738 aaKnown RBP17.69■□□□□ 0.42
LMNA-222ENST00000508500 SUSD3Q96L08 255 aa17.69■□□□□ 0.42
LMNA-222ENST00000508500 CLIC6Q96NY7 704 aa17.69■□□□□ 0.42
LMNA-222ENST00000508500 IKZF4Q9H2S9 585 aa17.69■□□□□ 0.42
LMNA-222ENST00000508500 PARVGQ9HBI0 331 aa17.69■□□□□ 0.42
LMNA-222ENST00000508500 RIF1Q5UIP0 2472 aaKnown RBP17.69■□□□□ 0.42
LMNA-222ENST00000508500 LACTBL1A8MY62 500 aa17.68■□□□□ 0.42
LMNA-222ENST00000508500 K7ENM7 598 aa17.68■□□□□ 0.42
LMNA-222ENST00000508500 SYN3O14994 580 aa17.68■□□□□ 0.42
LMNA-222ENST00000508500 FAM13AO94988 1023 aa17.68■□□□□ 0.42
LMNA-222ENST00000508500 SEC24AO95486 1093 aa17.68■□□□□ 0.42
LMNA-222ENST00000508500 ADRB2P07550 413 aa17.68■□□□□ 0.42
LMNA-222ENST00000508500 CFHP08603 1231 aa17.68■□□□□ 0.42
LMNA-222ENST00000508500 POU2F2P09086 479 aa17.68■□□□□ 0.42
LMNA-222ENST00000508500 ANP32AP39687 249 aaKnown RBP17.68■□□□□ 0.42
LMNA-222ENST00000508500 GUCY2FP51841 1108 aa17.68■□□□□ 0.42
LMNA-222ENST00000508500 GTF2BQ00403 316 aa17.68■□□□□ 0.42
LMNA-222ENST00000508500 ENOX2Q16206 610 aaKnown RBP17.68■□□□□ 0.42
LMNA-222ENST00000508500 ZC2HC1CQ53FD0 456 aaPredicted RBP17.68■□□□□ 0.42
LMNA-222ENST00000508500 ZNF461Q8TAF7 563 aa17.68■□□□□ 0.42
LMNA-222ENST00000508500 FGF14Q92915 247 aa17.68■□□□□ 0.42
LMNA-222ENST00000508500 FOXD4L1Q9NU39 408 aa17.68■□□□□ 0.42
LMNA-222ENST00000508500 FBXL5Q9UKA1 691 aa17.68■□□□□ 0.42
LMNA-222ENST00000508500 POLIQ9UNA4 740 aa17.68■□□□□ 0.42
LMNA-222ENST00000508500 MTMR6Q9Y217 621 aa17.68■□□□□ 0.42
LMNA-222ENST00000508500 SRPRBQ9Y5M8 271 aaKnown RBP17.68■□□□□ 0.42
LMNA-222ENST00000508500 NUMBLQ9Y6R0 609 aa17.68■□□□□ 0.42
LMNA-222ENST00000508500 FANCMQ8IYD8 2048 aa17.67■□□□□ 0.42
LMNA-222ENST00000508500 CACNA1IQ9P0X4 2223 aa17.67■□□□□ 0.42
LMNA-222ENST00000508500 TISP43B9A030 160 aa17.67■□□□□ 0.42
LMNA-222ENST00000508500 ANKRD63C9JTQ0 380 aa17.67■□□□□ 0.42
LMNA-222ENST00000508500 H0YCG3 227 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms