RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 CASD1Q96PB1 797 aa9.35□□□□□ -0.91
USP46-207ENST00000508499 FNBP1Q96RU3 617 aa9.35□□□□□ -0.91
USP46-207ENST00000508499 RBSNQ9H1K0 784 aa9.35□□□□□ -0.91
USP46-207ENST00000508499 VRTNQ9H8Y1 702 aa9.35□□□□□ -0.91
USP46-207ENST00000508499 TMEM8AQ9HCN3 771 aa9.35□□□□□ -0.91
USP46-207ENST00000508499 PDE11AQ9HCR9 933 aa9.35□□□□□ -0.91
USP46-207ENST00000508499 ITGA11Q9UKX5 1188 aa9.35□□□□□ -0.91
USP46-207ENST00000508499 DAAM1Q9Y4D1 1078 aa9.35□□□□□ -0.91
USP46-207ENST00000508499 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.35□□□□□ -0.91
USP46-207ENST00000508499 A0A1B0GTH6 734 aa9.34□□□□□ -0.91
USP46-207ENST00000508499 ANO9A1A5B4 782 aa9.34□□□□□ -0.91
USP46-207ENST00000508499 MEIS3P2A8K0S8 358 aa9.34□□□□□ -0.91
USP46-207ENST00000508499 ZC3H11AO75152 810 aaKnown RBP eCLIP9.34□□□□□ -0.91
USP46-207ENST00000508499 HARSP12081 509 aaKnown RBP9.34□□□□□ -0.91
USP46-207ENST00000508499 RPL9P32969 192 aaKnown RBP9.34□□□□□ -0.91
USP46-207ENST00000508499 MLH1P40692 756 aa9.34□□□□□ -0.91
USP46-207ENST00000508499 WNT7BP56706 349 aa9.34□□□□□ -0.91
USP46-207ENST00000508499 KCNH2Q12809 1159 aa9.34□□□□□ -0.91
USP46-207ENST00000508499 TMEM132DQ14C87 1099 aa9.34□□□□□ -0.91
USP46-207ENST00000508499 VWA3BQ502W6 1294 aa9.34□□□□□ -0.91
USP46-207ENST00000508499 SEZ6Q53EL9 994 aa9.34□□□□□ -0.91
USP46-207ENST00000508499 NOMO2Q5JPE7 1267 aa9.34□□□□□ -0.91
USP46-207ENST00000508499 KRT39Q6A163 491 aa9.34□□□□□ -0.91
USP46-207ENST00000508499 OTOP2Q7RTS6 562 aa9.34□□□□□ -0.91
USP46-207ENST00000508499 EFCAB13Q8IY85 973 aa9.34□□□□□ -0.91
USP46-207ENST00000508499 LRRC43Q8N309 656 aa9.34□□□□□ -0.91
USP46-207ENST00000508499 LRRC52Q8N7C0 313 aa9.34□□□□□ -0.91
USP46-207ENST00000508499 RDH13Q8NBN7 331 aa9.34□□□□□ -0.91
USP46-207ENST00000508499 URGCPQ8TCY9 931 aa9.34□□□□□ -0.91
USP46-207ENST00000508499 ZNF516Q92618 1163 aa9.34□□□□□ -0.91
USP46-207ENST00000508499 TAF4BQ92750 862 aa9.34□□□□□ -0.91
USP46-207ENST00000508499 EEF2KMTQ96G04 330 aa9.34□□□□□ -0.91
USP46-207ENST00000508499 DDX27Q96GQ7 796 aaKnown RBP9.34□□□□□ -0.91
USP46-207ENST00000508499 RPS6KC1Q96S38 1066 aa9.34□□□□□ -0.91
USP46-207ENST00000508499 GAD1Q99259 594 aa9.34□□□□□ -0.91
USP46-207ENST00000508499 TMEM175Q9BSA9 504 aa9.34□□□□□ -0.91
USP46-207ENST00000508499 NDST4Q9H3R1 872 aa9.34□□□□□ -0.91
USP46-207ENST00000508499 LRFN2Q9ULH4 789 aa9.34□□□□□ -0.91
USP46-207ENST00000508499 INSL6Q9Y581 213 aa9.34□□□□□ -0.91
USP46-207ENST00000508499 SLC4A7Q9Y6M7 1214 aa9.34□□□□□ -0.91
USP46-207ENST00000508499 TSC2P49815 1807 aa9.34□□□□□ -0.91
USP46-207ENST00000508499 PDE4DIPQ5VU43 2346 aa9.34□□□□□ -0.91
USP46-207ENST00000508499 PTPRJQ12913 1337 aa9.33□□□□□ -0.92
USP46-207ENST00000508499 LGALS16A8MUM7 142 aa9.33□□□□□ -0.92
USP46-207ENST00000508499 H0YGN5 161 aa9.33□□□□□ -0.92
USP46-207ENST00000508499 PIRO00625 290 aa9.33□□□□□ -0.92
USP46-207ENST00000508499 AFPP02771 609 aaKnown RBP9.33□□□□□ -0.92
USP46-207ENST00000508499 TPM2P07951 284 aa9.33□□□□□ -0.92
USP46-207ENST00000508499 NFICP08651 508 aa9.33□□□□□ -0.92
USP46-207ENST00000508499 ATP1A3P13637 1013 aa9.33□□□□□ -0.92
USP46-207ENST00000508499 TNNI1P19237 187 aa9.33□□□□□ -0.92
USP46-207ENST00000508499 CDK11BP21127 795 aaKnown RBP9.33□□□□□ -0.92
USP46-207ENST00000508499 ATICP31939 592 aa9.33□□□□□ -0.92
USP46-207ENST00000508499 MTIF2P46199 727 aaKnown RBP9.33□□□□□ -0.92
USP46-207ENST00000508499 FMO5P49326 533 aa9.33□□□□□ -0.92
USP46-207ENST00000508499 COPB1P53618 953 aaKnown RBP9.33□□□□□ -0.92
USP46-207ENST00000508499 OSTNP61366 133 aa9.33□□□□□ -0.92
USP46-207ENST00000508499 DLG4P78352 724 aa9.33□□□□□ -0.92
USP46-207ENST00000508499 DEFB103AP81534 67 aa9.33□□□□□ -0.92
USP46-207ENST00000508499 MLLT1Q03111 559 aaPredicted RBP9.33□□□□□ -0.92
USP46-207ENST00000508499 PPP3CAQ08209 521 aa9.33□□□□□ -0.92
USP46-207ENST00000508499 TUSC3Q13454 348 aa9.33□□□□□ -0.92
USP46-207ENST00000508499 NR1I3Q14994 352 aa9.33□□□□□ -0.92
USP46-207ENST00000508499 JADE1Q6IE81 842 aa9.33□□□□□ -0.92
USP46-207ENST00000508499 SV2AQ7L0J3 742 aa9.33□□□□□ -0.92
USP46-207ENST00000508499 HERC6Q8IVU3 1022 aa9.33□□□□□ -0.92
USP46-207ENST00000508499 ABI1Q8IZP0 508 aa9.33□□□□□ -0.92
USP46-207ENST00000508499 BEST2Q8NFU1 509 aa9.33□□□□□ -0.92
USP46-207ENST00000508499 CLP1Q92989 425 aaKnown RBP9.33□□□□□ -0.92
USP46-207ENST00000508499 LPPQ93052 612 aa9.33□□□□□ -0.92
USP46-207ENST00000508499 ANKRD36BP1Q96IX9 119 aa9.33□□□□□ -0.92
USP46-207ENST00000508499 ZFP42Q96MM3 310 aa9.33□□□□□ -0.92
USP46-207ENST00000508499 ERGIC2Q96RQ1 377 aa9.33□□□□□ -0.92
USP46-207ENST00000508499 RAD9AQ99638 391 aa9.33□□□□□ -0.92
USP46-207ENST00000508499 TBC1D13Q9NVG8 400 aa9.33□□□□□ -0.92
USP46-207ENST00000508499 CXXC1Q9P0U4 656 aaPredicted RBP9.33□□□□□ -0.92
USP46-207ENST00000508499 STK39Q9UEW8 545 aa9.33□□□□□ -0.92
USP46-207ENST00000508499 PARP2Q9UGN5 583 aa9.33□□□□□ -0.92
USP46-207ENST00000508499 FBXL5Q9UKA1 691 aa9.33□□□□□ -0.92
USP46-207ENST00000508499 A0A1W2PQC6 194 aa9.32□□□□□ -0.92
USP46-207ENST00000508499 TNNC2P02585 160 aa9.32□□□□□ -0.92
USP46-207ENST00000508499 FAM163BP0C2L3 166 aa9.32□□□□□ -0.92
USP46-207ENST00000508499 TMEM191BP0C7N4 346 aa9.32□□□□□ -0.92
USP46-207ENST00000508499 FGFR1P11362 822 aa9.32□□□□□ -0.92
USP46-207ENST00000508499 ATP2A2P16615 1042 aaKnown RBP9.32□□□□□ -0.92
USP46-207ENST00000508499 RFX1P22670 979 aa9.32□□□□□ -0.92
USP46-207ENST00000508499 PNPLA4P41247 253 aa9.32□□□□□ -0.92
USP46-207ENST00000508499 AARSP49588 968 aaKnown RBP eCLIP9.32□□□□□ -0.92
USP46-207ENST00000508499 MXI1P50539 228 aa9.32□□□□□ -0.92
USP46-207ENST00000508499 SCNN1GP51170 649 aa9.32□□□□□ -0.92
USP46-207ENST00000508499 CETN1Q12798 172 aa9.32□□□□□ -0.92
USP46-207ENST00000508499 UPP1Q16831 310 aa9.32□□□□□ -0.92
USP46-207ENST00000508499 CBWD6Q4V339 395 aa9.32□□□□□ -0.92
USP46-207ENST00000508499 EPC2Q52LR7 807 aa9.32□□□□□ -0.92
USP46-207ENST00000508499 CBWD3Q5JTY5 395 aa9.32□□□□□ -0.92
USP46-207ENST00000508499 CBWD5Q5RIA9 395 aa9.32□□□□□ -0.92
USP46-207ENST00000508499 TDRD10Q5VZ19 366 aaKnown RBP9.32□□□□□ -0.92
USP46-207ENST00000508499 TRAPPC11Q7Z392 1133 aa9.32□□□□□ -0.92
USP46-207ENST00000508499 COLGALT2Q8IYK4 626 aa9.32□□□□□ -0.92
USP46-207ENST00000508499 C1orf127Q8N9H9 656 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms