RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 XYLBO75191 536 aa14.22□□□□□ -0.13
HMGCS1-205ENST00000508319 SRFP11831 508 aa14.22□□□□□ -0.13
HMGCS1-205ENST00000508319 NCKAP1LP55160 1127 aa14.22□□□□□ -0.13
HMGCS1-205ENST00000508319 ROR1Q01973 937 aa14.22□□□□□ -0.13
HMGCS1-205ENST00000508319 GRIN1Q05586 938 aa14.22□□□□□ -0.13
HMGCS1-205ENST00000508319 MCL1Q07820 350 aa14.22□□□□□ -0.13
HMGCS1-205ENST00000508319 SLC10A6Q3KNW5 377 aa14.22□□□□□ -0.13
HMGCS1-205ENST00000508319 SEZ6Q53EL9 994 aa14.22□□□□□ -0.13
HMGCS1-205ENST00000508319 LARP1BQ659C4 914 aaKnown RBP14.22□□□□□ -0.13
HMGCS1-205ENST00000508319 SLC8B1Q6J4K2 584 aa14.22□□□□□ -0.13
HMGCS1-205ENST00000508319 ZPBP2Q6X784 338 aa14.22□□□□□ -0.13
HMGCS1-205ENST00000508319 REEP2Q9BRK0 252 aa14.22□□□□□ -0.13
HMGCS1-205ENST00000508319 HAPLN2Q9GZV7 340 aa14.22□□□□□ -0.13
HMGCS1-205ENST00000508319 IRF2BPLQ9H1B7 796 aa14.22□□□□□ -0.13
HMGCS1-205ENST00000508319 BLOC1S4Q9NUP1 217 aa14.22□□□□□ -0.13
HMGCS1-205ENST00000508319 WNT16Q9UBV4 365 aa14.22□□□□□ -0.13
HMGCS1-205ENST00000508319 KCNG1Q9UIX4 513 aa14.22□□□□□ -0.13
HMGCS1-205ENST00000508319 CDH7Q9ULB5 785 aa14.22□□□□□ -0.13
HMGCS1-205ENST00000508319 ODF2LQ9ULJ1 636 aa14.22□□□□□ -0.13
HMGCS1-205ENST00000508319 WDR27A2RRH5 827 aa14.21□□□□□ -0.13
HMGCS1-205ENST00000508319 SYN3O14994 580 aa14.21□□□□□ -0.13
HMGCS1-205ENST00000508319 PI15O43692 258 aa14.21□□□□□ -0.13
HMGCS1-205ENST00000508319 TBC1D4O60343 1298 aa14.21□□□□□ -0.13
HMGCS1-205ENST00000508319 CXCL8P10145 99 aa14.21□□□□□ -0.13
HMGCS1-205ENST00000508319 RPL9P32969 192 aaKnown RBP14.21□□□□□ -0.13
HMGCS1-205ENST00000508319 ZNF131P52739 623 aa14.21□□□□□ -0.13
HMGCS1-205ENST00000508319 UVSSAQ2YD98 709 aa14.21□□□□□ -0.13
HMGCS1-205ENST00000508319 VARS2Q5ST30 1063 aaKnown RBP14.21□□□□□ -0.13
HMGCS1-205ENST00000508319 RTL10Q7L3V2 364 aa14.21□□□□□ -0.13
HMGCS1-205ENST00000508319 BRAPQ7Z569 592 aa14.21□□□□□ -0.13
HMGCS1-205ENST00000508319 TMEM130Q8N3G9 435 aa14.21□□□□□ -0.13
HMGCS1-205ENST00000508319 ST13P5Q8NFI4 369 aaPredicted RBP14.21□□□□□ -0.13
HMGCS1-205ENST00000508319 GPR152Q8TDT2 470 aa14.21□□□□□ -0.13
HMGCS1-205ENST00000508319 FGF13Q92913 245 aa14.21□□□□□ -0.13
HMGCS1-205ENST00000508319 FGF14Q92915 247 aa14.21□□□□□ -0.13
HMGCS1-205ENST00000508319 HCFC1R1Q9NWW0 138 aa14.21□□□□□ -0.13
HMGCS1-205ENST00000508319 LARSQ9P2J5 1176 aaKnown RBP14.21□□□□□ -0.13
HMGCS1-205ENST00000508319 TUBGCP4Q9UGJ1 667 aa14.21□□□□□ -0.13
HMGCS1-205ENST00000508319 POLIQ9UNA4 740 aa14.21□□□□□ -0.13
HMGCS1-205ENST00000508319 ZFP37Q9Y6Q3 630 aaPredicted RBP14.21□□□□□ -0.13
HMGCS1-205ENST00000508319 FAM186AA6NE01 2351 aa14.2□□□□□ -0.14
HMGCS1-205ENST00000508319 GVINP1Q7Z2Y8 2422 aa14.2□□□□□ -0.14
HMGCS1-205ENST00000508319 H0YCG3 227 aa14.2□□□□□ -0.14
HMGCS1-205ENST00000508319 CLDN3O15551 220 aa14.2□□□□□ -0.14
HMGCS1-205ENST00000508319 FAM189A1O60320 539 aa14.2□□□□□ -0.14
HMGCS1-205ENST00000508319 ABLIM3O94929 683 aa14.2□□□□□ -0.14
HMGCS1-205ENST00000508319 BMP15O95972 392 aa14.2□□□□□ -0.14
HMGCS1-205ENST00000508319 PLCG1P19174 1290 aa14.2□□□□□ -0.14
HMGCS1-205ENST00000508319 UBA7P41226 1012 aa14.2□□□□□ -0.14
HMGCS1-205ENST00000508319 MRPL58Q14197 206 aaKnown RBP14.2□□□□□ -0.14
HMGCS1-205ENST00000508319 PABPC1LQ4VXU2 614 aaKnown RBP14.2□□□□□ -0.14
HMGCS1-205ENST00000508319 PARM1Q6UWI2 310 aa14.2□□□□□ -0.14
HMGCS1-205ENST00000508319 HAUS6Q7Z4H7 955 aa14.2□□□□□ -0.14
HMGCS1-205ENST00000508319 GPBP1Q86WP2 473 aa14.2□□□□□ -0.14
HMGCS1-205ENST00000508319 ITFG1Q8TB96 612 aa14.2□□□□□ -0.14
HMGCS1-205ENST00000508319 CALML4Q96GE6 196 aa14.2□□□□□ -0.14
HMGCS1-205ENST00000508319 SUSD3Q96L08 255 aa14.2□□□□□ -0.14
HMGCS1-205ENST00000508319 RPP25Q9BUL9 199 aaKnown RBP14.2□□□□□ -0.14
HMGCS1-205ENST00000508319 SLC2A4RGQ9NR83 387 aa14.2□□□□□ -0.14
HMGCS1-205ENST00000508319 DNMT3BQ9UBC3 853 aaKnown RBP14.2□□□□□ -0.14
HMGCS1-205ENST00000508319 CA14Q9ULX7 337 aa14.2□□□□□ -0.14
HMGCS1-205ENST00000508319 COL4A3Q01955 1670 aa14.2□□□□□ -0.14
HMGCS1-205ENST00000508319 ANK1P16157 1881 aa14.19□□□□□ -0.14
HMGCS1-205ENST00000508319 TTC26A0AVF1 554 aa14.19□□□□□ -0.14
HMGCS1-205ENST00000508319 PROB1E7EW31 1015 aa14.19□□□□□ -0.14
HMGCS1-205ENST00000508319 HNRNPDLO14979 420 aaKnown RBP14.19□□□□□ -0.14
HMGCS1-205ENST00000508319 LONP1P36776 959 aaKnown RBP14.19□□□□□ -0.14
HMGCS1-205ENST00000508319 TNFSF9P41273 254 aa14.19□□□□□ -0.14
HMGCS1-205ENST00000508319 CUL4AQ13619 759 aa14.19□□□□□ -0.14
HMGCS1-205ENST00000508319 MCM6Q14566 821 aa14.19□□□□□ -0.14
HMGCS1-205ENST00000508319 KARSQ15046 597 aaKnown RBP14.19□□□□□ -0.14
HMGCS1-205ENST00000508319 SF3A1Q15459 793 aaKnown RBP14.19□□□□□ -0.14
HMGCS1-205ENST00000508319 SLC5A9Q2M3M2 681 aa14.19□□□□□ -0.14
HMGCS1-205ENST00000508319 NPAS3Q8IXF0 933 aa14.19□□□□□ -0.14
HMGCS1-205ENST00000508319 CCDC105Q8IYK2 499 aa14.19□□□□□ -0.14
HMGCS1-205ENST00000508319 ZNF461Q8TAF7 563 aa14.19□□□□□ -0.14
HMGCS1-205ENST00000508319 RAD54LQ92698 747 aa14.19□□□□□ -0.14
HMGCS1-205ENST00000508319 BICD1Q96G01 975 aa14.19□□□□□ -0.14
HMGCS1-205ENST00000508319 FIZ1Q96SL8 496 aa14.19□□□□□ -0.14
HMGCS1-205ENST00000508319 RTP3Q9BQQ7 232 aa14.19□□□□□ -0.14
HMGCS1-205ENST00000508319 TBC1D17Q9HA65 648 aa14.19□□□□□ -0.14
HMGCS1-205ENST00000508319 ARHGEF3Q9NR81 526 aa14.19□□□□□ -0.14
HMGCS1-205ENST00000508319 NUB1Q9Y5A7 615 aa14.19□□□□□ -0.14
HMGCS1-205ENST00000508319 TSC2P49815 1807 aa14.19□□□□□ -0.14
HMGCS1-205ENST00000508319 PTPRZ1P23471 2315 aaPredicted RBP14.19□□□□□ -0.14
HMGCS1-205ENST00000508319 SPTBN4Q9H254 2564 aa14.18□□□□□ -0.14
HMGCS1-205ENST00000508319 ARHGEF37A1IGU5 675 aa14.18□□□□□ -0.14
HMGCS1-205ENST00000508319 K7ENM7 598 aa14.18□□□□□ -0.14
HMGCS1-205ENST00000508319 GFRA3O60609 400 aa14.18□□□□□ -0.14
HMGCS1-205ENST00000508319 FAM13AO94988 1023 aa14.18□□□□□ -0.14
HMGCS1-205ENST00000508319 PIGRP01833 764 aa14.18□□□□□ -0.14
HMGCS1-205ENST00000508319 MCM4P33991 863 aa14.18□□□□□ -0.14
HMGCS1-205ENST00000508319 NBL1P41271 181 aa14.18□□□□□ -0.14
HMGCS1-205ENST00000508319 SPAG1Q07617 926 aa14.18□□□□□ -0.14
HMGCS1-205ENST00000508319 DHX8Q14562 1220 aaKnown RBP14.18□□□□□ -0.14
HMGCS1-205ENST00000508319 ENOX2Q16206 610 aaKnown RBP14.18□□□□□ -0.14
HMGCS1-205ENST00000508319 ZBTB41Q5SVQ8 909 aa14.18□□□□□ -0.14
HMGCS1-205ENST00000508319 SLC39A4Q6P5W5 647 aa14.18□□□□□ -0.14
HMGCS1-205ENST00000508319 MTSS1LQ765P7 747 aa14.18□□□□□ -0.14
HMGCS1-205ENST00000508319 PLEKHA5Q9HAU0 1116 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms