RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 TIPINQ9BVW5 301 aa10.15□□□□□ -0.78
UBE2D3-223ENST00000508249 EIF2AQ9BY44 585 aaKnown RBP10.15□□□□□ -0.78
UBE2D3-223ENST00000508249 NFKBIZQ9BYH8 718 aa10.15□□□□□ -0.78
UBE2D3-223ENST00000508249 C2orf42Q9NWW7 574 aa10.15□□□□□ -0.78
UBE2D3-223ENST00000508249 WRAP73Q9P2S5 460 aaPredicted RBP10.15□□□□□ -0.78
UBE2D3-223ENST00000508249 DPP7Q9UHL4 492 aa10.15□□□□□ -0.78
UBE2D3-223ENST00000508249 ZMIZ1Q9ULJ6 1067 aa10.15□□□□□ -0.78
UBE2D3-223ENST00000508249 MTMR6Q9Y217 621 aa10.15□□□□□ -0.78
UBE2D3-223ENST00000508249 KIAA1549LQ6ZVL6 1849 aa10.14□□□□□ -0.79
UBE2D3-223ENST00000508249 TRIP11Q15643 1979 aa10.14□□□□□ -0.79
UBE2D3-223ENST00000508249 ARHGEF35A5YM69 484 aa10.14□□□□□ -0.79
UBE2D3-223ENST00000508249 ARL5CA6NH57 179 aa10.14□□□□□ -0.79
UBE2D3-223ENST00000508249 K7ESF4 209 aa10.14□□□□□ -0.79
UBE2D3-223ENST00000508249 MED24O75448 989 aa10.14□□□□□ -0.79
UBE2D3-223ENST00000508249 POU2F2P09086 479 aa10.14□□□□□ -0.79
UBE2D3-223ENST00000508249 HOXA9P31269 272 aa10.14□□□□□ -0.79
UBE2D3-223ENST00000508249 OR1G1P47890 313 aa10.14□□□□□ -0.79
UBE2D3-223ENST00000508249 PFKPQ01813 784 aa10.14□□□□□ -0.79
UBE2D3-223ENST00000508249 SATB1Q01826 763 aa10.14□□□□□ -0.79
UBE2D3-223ENST00000508249 NBR1Q14596 966 aa10.14□□□□□ -0.79
UBE2D3-223ENST00000508249 PPP2R5AQ15172 486 aa10.14□□□□□ -0.79
UBE2D3-223ENST00000508249 HYIQ5T013 277 aa10.14□□□□□ -0.79
UBE2D3-223ENST00000508249 FERMT3Q86UX7 667 aa10.14□□□□□ -0.79
UBE2D3-223ENST00000508249 IFNLR1Q8IU57 520 aaPredicted RBP10.14□□□□□ -0.79
UBE2D3-223ENST00000508249 RHPN2Q8IUC4 686 aa10.14□□□□□ -0.79
UBE2D3-223ENST00000508249 CELF5Q8N6W0 485 aaKnown RBP10.14□□□□□ -0.79
UBE2D3-223ENST00000508249 RABGGTAQ92696 567 aa10.14□□□□□ -0.79
UBE2D3-223ENST00000508249 PGBD4Q96DM1 585 aa10.14□□□□□ -0.79
UBE2D3-223ENST00000508249 CCDC51Q96ER9 411 aa10.14□□□□□ -0.79
UBE2D3-223ENST00000508249 CALML4Q96GE6 196 aa10.14□□□□□ -0.79
UBE2D3-223ENST00000508249 CDK5RAP3Q96JB5 506 aa10.14□□□□□ -0.79
UBE2D3-223ENST00000508249 NLRP4Q96MN2 994 aa10.14□□□□□ -0.79
UBE2D3-223ENST00000508249 ZNF396Q96N95 335 aaPredicted RBP10.14□□□□□ -0.79
UBE2D3-223ENST00000508249 GAD1Q99259 594 aa10.14□□□□□ -0.79
UBE2D3-223ENST00000508249 CLSTN3Q9BQT9 956 aa10.14□□□□□ -0.79
UBE2D3-223ENST00000508249 PAAF1Q9BRP4 392 aa10.14□□□□□ -0.79
UBE2D3-223ENST00000508249 KCND2Q9NZV8 630 aa10.14□□□□□ -0.79
UBE2D3-223ENST00000508249 DNM3Q9UQ16 869 aa10.14□□□□□ -0.79
UBE2D3-223ENST00000508249 SSX2IPQ9Y2D8 614 aa10.14□□□□□ -0.79
UBE2D3-223ENST00000508249 HES2Q9Y543 173 aa10.14□□□□□ -0.79
UBE2D3-223ENST00000508249 IPPQ9Y573 584 aa10.14□□□□□ -0.79
UBE2D3-223ENST00000508249 SDK1Q7Z5N4 2213 aa10.13□□□□□ -0.79
UBE2D3-223ENST00000508249 VWA3AA6NCI4 1184 aa10.13□□□□□ -0.79
UBE2D3-223ENST00000508249 CCL16O15467 120 aa10.13□□□□□ -0.79
UBE2D3-223ENST00000508249 ECI2O75521 394 aa10.13□□□□□ -0.79
UBE2D3-223ENST00000508249 C8AP07357 584 aa10.13□□□□□ -0.79
UBE2D3-223ENST00000508249 CYP11B2P19099 503 aa10.13□□□□□ -0.79
UBE2D3-223ENST00000508249 AXLP30530 894 aa10.13□□□□□ -0.79
UBE2D3-223ENST00000508249 TXLNAP40222 546 aa10.13□□□□□ -0.79
UBE2D3-223ENST00000508249 NCBP1Q09161 790 aaKnown RBP10.13□□□□□ -0.79
UBE2D3-223ENST00000508249 LAMTOR4Q0VGL1 99 aa10.13□□□□□ -0.79
UBE2D3-223ENST00000508249 SF3A1Q15459 793 aaKnown RBP10.13□□□□□ -0.79
UBE2D3-223ENST00000508249 ELMSAN1Q6PJG2 1045 aa10.13□□□□□ -0.79
UBE2D3-223ENST00000508249 ZNF579Q8NAF0 562 aaKnown RBP10.13□□□□□ -0.79
UBE2D3-223ENST00000508249 KDF1Q8NAX2 398 aaPredicted RBP10.13□□□□□ -0.79
UBE2D3-223ENST00000508249 PIGOQ8TEQ8 1089 aa10.13□□□□□ -0.79
UBE2D3-223ENST00000508249 ING5Q8WYH8 240 aa10.13□□□□□ -0.79
UBE2D3-223ENST00000508249 KIFAP3Q92845 792 aa10.13□□□□□ -0.79
UBE2D3-223ENST00000508249 C2orf40Q9H1Z8 148 aa10.13□□□□□ -0.79
UBE2D3-223ENST00000508249 C17orf75Q9HAS0 396 aa10.13□□□□□ -0.79
UBE2D3-223ENST00000508249 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.13□□□□□ -0.79
UBE2D3-223ENST00000508249 KANSL3Q9P2N6 904 aa10.13□□□□□ -0.79
UBE2D3-223ENST00000508249 DNMT3BQ9UBC3 853 aaKnown RBP10.13□□□□□ -0.79
UBE2D3-223ENST00000508249 KIAA1024Q9UPX6 916 aa10.13□□□□□ -0.79
UBE2D3-223ENST00000508249 NUP210Q8TEM1 1887 aaPredicted RBP10.13□□□□□ -0.79
UBE2D3-223ENST00000508249 MYO16Q9Y6X6 1858 aa10.13□□□□□ -0.79
UBE2D3-223ENST00000508249 ARNTLO00327 626 aa10.12□□□□□ -0.79
UBE2D3-223ENST00000508249 USO1O60763 962 aaKnown RBP10.12□□□□□ -0.79
UBE2D3-223ENST00000508249 HNRNPA1P09651 372 aaKnown RBP eCLIP10.12□□□□□ -0.79
UBE2D3-223ENST00000508249 CHRNB1P11230 501 aa10.12□□□□□ -0.79
UBE2D3-223ENST00000508249 CEBPBP17676 345 aa10.12□□□□□ -0.79
UBE2D3-223ENST00000508249 SCP2P22307 547 aa10.12□□□□□ -0.79
UBE2D3-223ENST00000508249 KCNA4P22459 653 aa10.12□□□□□ -0.79
UBE2D3-223ENST00000508249 ARL2P36404 184 aa10.12□□□□□ -0.79
UBE2D3-223ENST00000508249 UBA7P41226 1012 aa10.12□□□□□ -0.79
UBE2D3-223ENST00000508249 SF3A2Q15428 464 aaKnown RBP10.12□□□□□ -0.79
UBE2D3-223ENST00000508249 AMHR2Q16671 573 aa10.12□□□□□ -0.79
UBE2D3-223ENST00000508249 USP41Q3LFD5 358 aa10.12□□□□□ -0.79
UBE2D3-223ENST00000508249 TANGO2Q6ICL3 276 aa10.12□□□□□ -0.79
UBE2D3-223ENST00000508249 PADI6Q6TGC4 694 aa10.12□□□□□ -0.79
UBE2D3-223ENST00000508249 UNQ6494/PRO21346Q6UXR6 183 aa10.12□□□□□ -0.79
UBE2D3-223ENST00000508249 ZNF852Q6ZMS4 543 aa10.12□□□□□ -0.79
UBE2D3-223ENST00000508249 PRR23BQ6ZRT6 265 aa10.12□□□□□ -0.79
UBE2D3-223ENST00000508249 ZBTB8OSQ8IWT0 167 aa10.12□□□□□ -0.79
UBE2D3-223ENST00000508249 FAM160A2Q8N612 972 aaPredicted RBP10.12□□□□□ -0.79
UBE2D3-223ENST00000508249 RNF149Q8NC42 400 aa10.12□□□□□ -0.79
UBE2D3-223ENST00000508249 LNX1Q8TBB1 728 aaPredicted RBP10.12□□□□□ -0.79
UBE2D3-223ENST00000508249 PRPF31Q8WWY3 499 aaKnown RBP10.12□□□□□ -0.79
UBE2D3-223ENST00000508249 DNASE1L2Q92874 299 aa10.12□□□□□ -0.79
UBE2D3-223ENST00000508249 TMEM143Q96AN5 459 aa10.12□□□□□ -0.79
UBE2D3-223ENST00000508249 PRIMPOLQ96LW4 560 aa10.12□□□□□ -0.79
UBE2D3-223ENST00000508249 FAM193BQ96PV7 902 aaPredicted RBP10.12□□□□□ -0.79
UBE2D3-223ENST00000508249 NELL2Q99435 816 aa10.12□□□□□ -0.79
UBE2D3-223ENST00000508249 NXF3Q9H4D5 531 aaKnown RBP10.12□□□□□ -0.79
UBE2D3-223ENST00000508249 XPNPEP1Q9NQW7 623 aa10.12□□□□□ -0.79
UBE2D3-223ENST00000508249 DDX19AQ9NUU7 478 aaKnown RBP10.12□□□□□ -0.79
UBE2D3-223ENST00000508249 ADAM28Q9UKQ2 775 aa10.12□□□□□ -0.79
UBE2D3-223ENST00000508249 NDRG2Q9UN36 371 aaKnown RBP10.12□□□□□ -0.79
UBE2D3-223ENST00000508249 SRPRBQ9Y5M8 271 aaKnown RBP10.12□□□□□ -0.79
UBE2D3-223ENST00000508249 CHURC1-FNTBB4DL54 471 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms