RNA–Protein interactions for RNA: ENST00000506963.1

SFXN1-205, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-205ENST00000506963 ADAM9Q13443 819 aa10.54□□□□□ -0.72
SFXN1-205ENST00000506963 ADGRE1Q14246 886 aa10.54□□□□□ -0.72
SFXN1-205ENST00000506963 PTPROQ16827 1216 aa10.54□□□□□ -0.72
SFXN1-205ENST00000506963 ISM2Q6H9L7 571 aa10.54□□□□□ -0.72
SFXN1-205ENST00000506963 CD300LGQ6UXG3 332 aa10.54□□□□□ -0.72
SFXN1-205ENST00000506963 INTS8Q75QN2 995 aaKnown RBP10.54□□□□□ -0.72
SFXN1-205ENST00000506963 Q7L0L9 218 aa10.54□□□□□ -0.72
SFXN1-205ENST00000506963 WDR49Q8IV35 697 aa10.54□□□□□ -0.72
SFXN1-205ENST00000506963 BEST2Q8NFU1 509 aa10.54□□□□□ -0.72
SFXN1-205ENST00000506963 CXorf38Q8TB03 319 aa10.54□□□□□ -0.72
SFXN1-205ENST00000506963 PARD3BQ8TEW8 1205 aa10.54□□□□□ -0.72
SFXN1-205ENST00000506963 CACTINQ8WUQ7 758 aaKnown RBP10.54□□□□□ -0.72
SFXN1-205ENST00000506963 NELFBQ8WX92 580 aa10.54□□□□□ -0.72
SFXN1-205ENST00000506963 C18orf25Q96B23 403 aaPredicted RBP10.54□□□□□ -0.72
SFXN1-205ENST00000506963 MRPL38Q96DV4 380 aaKnown RBP10.54□□□□□ -0.72
SFXN1-205ENST00000506963 BORCS6Q96GS4 357 aa10.54□□□□□ -0.72
SFXN1-205ENST00000506963 TMEM169Q96HH4 297 aa10.54□□□□□ -0.72
SFXN1-205ENST00000506963 CEP63Q96MT8 703 aa10.54□□□□□ -0.72
SFXN1-205ENST00000506963 CDX2Q99626 313 aaPredicted RBP10.54□□□□□ -0.72
SFXN1-205ENST00000506963 PAAF1Q9BRP4 392 aa10.54□□□□□ -0.72
SFXN1-205ENST00000506963 VN1R3Q9BXE9 311 aa10.54□□□□□ -0.72
SFXN1-205ENST00000506963 PRDM12Q9H4Q4 367 aa10.54□□□□□ -0.72
SFXN1-205ENST00000506963 PDE11AQ9HCR9 933 aa10.54□□□□□ -0.72
SFXN1-205ENST00000506963 INTS13Q9NVM9 706 aa10.54□□□□□ -0.72
SFXN1-205ENST00000506963 TUBGCP4Q9UGJ1 667 aa10.54□□□□□ -0.72
SFXN1-205ENST00000506963 PUF60Q9UHX1 559 aaKnown RBP10.54□□□□□ -0.72
SFXN1-205ENST00000506963 RWDD2AQ9UIY3 292 aa10.54□□□□□ -0.72
SFXN1-205ENST00000506963 ADAM28Q9UKQ2 775 aa10.54□□□□□ -0.72
SFXN1-205ENST00000506963 FRMD4BQ9Y2L6 1034 aa10.54□□□□□ -0.72
SFXN1-205ENST00000506963 IRAK3Q9Y616 596 aa10.54□□□□□ -0.72
SFXN1-205ENST00000506963 TRANK1O15050 2925 aa10.54□□□□□ -0.72
SFXN1-205ENST00000506963 NT5C1B-RDH14C9J2C7 533 aa10.53□□□□□ -0.72
SFXN1-205ENST00000506963 PODXLO00592 558 aa10.53□□□□□ -0.72
SFXN1-205ENST00000506963 IKBKBO14920 756 aa10.53□□□□□ -0.72
SFXN1-205ENST00000506963 KIF4AO95239 1232 aa10.53□□□□□ -0.72
SFXN1-205ENST00000506963 SOD2P04179 222 aa10.53□□□□□ -0.72
SFXN1-205ENST00000506963 DNAJB1P25685 340 aa10.53□□□□□ -0.72
SFXN1-205ENST00000506963 AARSP49588 968 aaKnown RBP eCLIP10.53□□□□□ -0.72
SFXN1-205ENST00000506963 CLCNKBP51801 687 aa10.53□□□□□ -0.72
SFXN1-205ENST00000506963 AP3M2P53677 418 aa10.53□□□□□ -0.72
SFXN1-205ENST00000506963 SPAG1Q07617 926 aa10.53□□□□□ -0.72
SFXN1-205ENST00000506963 ELAVL2Q12926 359 aaKnown RBP10.53□□□□□ -0.72
SFXN1-205ENST00000506963 DUOXA2Q1HG44 320 aa10.53□□□□□ -0.72
SFXN1-205ENST00000506963 DPCR1Q3MIW9 517 aa10.53□□□□□ -0.72
SFXN1-205ENST00000506963 USP37Q86T82 979 aa10.53□□□□□ -0.72
SFXN1-205ENST00000506963 PLEKHO2Q8TD55 490 aa10.53□□□□□ -0.72
SFXN1-205ENST00000506963 GDPD5Q8WTR4 605 aa10.53□□□□□ -0.72
SFXN1-205ENST00000506963 POF1BQ8WVV4 589 aa10.53□□□□□ -0.72
SFXN1-205ENST00000506963 FAM212AQ96EL1 285 aa10.53□□□□□ -0.72
SFXN1-205ENST00000506963 MED15Q96RN5 788 aa10.53□□□□□ -0.72
SFXN1-205ENST00000506963 CGRRF1Q99675 332 aa10.53□□□□□ -0.72
SFXN1-205ENST00000506963 DUSP9Q99956 384 aaKnown RBP10.53□□□□□ -0.72
SFXN1-205ENST00000506963 HERC2P3Q9BVR0 1158 aa10.53□□□□□ -0.72
SFXN1-205ENST00000506963 GOLGA2P5Q9HBQ8 144 aa10.53□□□□□ -0.72
SFXN1-205ENST00000506963 ALG13Q9NP73 1137 aaKnown RBP10.53□□□□□ -0.72
SFXN1-205ENST00000506963 TLR9Q9NR96 1032 aa10.53□□□□□ -0.72
SFXN1-205ENST00000506963 CHST7Q9NS84 486 aa10.53□□□□□ -0.72
SFXN1-205ENST00000506963 DACH1Q9UI36 760 aa10.53□□□□□ -0.72
SFXN1-205ENST00000506963 ITGA11Q9UKX5 1188 aa10.53□□□□□ -0.72
SFXN1-205ENST00000506963 PRG3Q9Y2Y8 225 aaPredicted RBP10.53□□□□□ -0.72
SFXN1-205ENST00000506963 SCN1AP35498 2009 aa10.53□□□□□ -0.72
SFXN1-205ENST00000506963 SF3B1O75533 1304 aaKnown RBP eCLIP10.53□□□□□ -0.729e-6■■■■■ 68.9
SFXN1-205ENST00000506963 PTPRJQ12913 1337 aa10.53□□□□□ -0.72
SFXN1-205ENST00000506963 TRIM49BA6NDI0 452 aa10.52□□□□□ -0.73
SFXN1-205ENST00000506963 RFXAPO00287 272 aa10.52□□□□□ -0.73
SFXN1-205ENST00000506963 TRAPPC3O43617 180 aa10.52□□□□□ -0.73
SFXN1-205ENST00000506963 LILRB3O75022 631 aa10.52□□□□□ -0.73
SFXN1-205ENST00000506963 B3GAT3O94766 335 aa10.52□□□□□ -0.73
SFXN1-205ENST00000506963 LETM1O95202 739 aaPredicted RBP10.52□□□□□ -0.73
SFXN1-205ENST00000506963 CTSAP10619 480 aa10.52□□□□□ -0.73
SFXN1-205ENST00000506963 PNPLA4P41247 253 aa10.52□□□□□ -0.73
SFXN1-205ENST00000506963 MARSP56192 900 aaKnown RBP10.52□□□□□ -0.73
SFXN1-205ENST00000506963 TIGD5Q53EQ6 642 aa10.52□□□□□ -0.73
SFXN1-205ENST00000506963 C9orf57Q5W0N0 161 aa10.52□□□□□ -0.73
SFXN1-205ENST00000506963 CEP135Q66GS9 1140 aa10.52□□□□□ -0.73
SFXN1-205ENST00000506963 FUT10Q6P4F1 479 aa10.52□□□□□ -0.73
SFXN1-205ENST00000506963 FILIP1Q7Z7B0 1213 aa10.52□□□□□ -0.73
SFXN1-205ENST00000506963 FAM186BQ8IYM0 893 aa10.52□□□□□ -0.73
SFXN1-205ENST00000506963 LRRC52Q8N7C0 313 aa10.52□□□□□ -0.73
SFXN1-205ENST00000506963 C1orf127Q8N9H9 656 aa10.52□□□□□ -0.73
SFXN1-205ENST00000506963 RDH13Q8NBN7 331 aa10.52□□□□□ -0.73
SFXN1-205ENST00000506963 C3orf58Q8NDZ4 430 aa10.52□□□□□ -0.73
SFXN1-205ENST00000506963 SUSD3Q96L08 255 aa10.52□□□□□ -0.73
SFXN1-205ENST00000506963 FAM161BQ96MY7 647 aa10.52□□□□□ -0.73
SFXN1-205ENST00000506963 FNBP1Q96RU3 617 aa10.52□□□□□ -0.73
SFXN1-205ENST00000506963 GAS2L1Q99501 681 aaPredicted RBP10.52□□□□□ -0.73
SFXN1-205ENST00000506963 GPR62Q9BZJ7 368 aa10.52□□□□□ -0.73
SFXN1-205ENST00000506963 ZBP1Q9H171 429 aa10.52□□□□□ -0.73
SFXN1-205ENST00000506963 NGRNQ9NPE2 291 aaKnown RBP10.52□□□□□ -0.73
SFXN1-205ENST00000506963 DPP3Q9NY33 737 aa10.52□□□□□ -0.73
SFXN1-205ENST00000506963 CACNG4Q9UBN1 327 aa10.52□□□□□ -0.73
SFXN1-205ENST00000506963 CTNND2Q9UQB3 1225 aa10.52□□□□□ -0.73
SFXN1-205ENST00000506963 MTCH2Q9Y6C9 303 aa10.52□□□□□ -0.73
SFXN1-205ENST00000506963 VWA8A3KMH1 1905 aa10.52□□□□□ -0.73
SFXN1-205ENST00000506963 BRWD1Q9NSI6 2320 aa10.51□□□□□ -0.73
SFXN1-205ENST00000506963 LRRIQ3A6PVS8 624 aaPredicted RBP10.51□□□□□ -0.73
SFXN1-205ENST00000506963 F8W810 466 aa10.51□□□□□ -0.73
SFXN1-205ENST00000506963 M0QZQ0 153 aa10.51□□□□□ -0.73
SFXN1-205ENST00000506963 SYN3O14994 580 aa10.51□□□□□ -0.73
SFXN1-205ENST00000506963 TADA2AO75478 443 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms