RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 FAM161BQ96MY7 647 aa10.53□□□□□ -0.72
CLCN3-205ENST00000506924 USP28Q96RU2 1077 aa10.53□□□□□ -0.72
CLCN3-205ENST00000506924 MMTAG2Q9BU76 263 aaKnown RBP10.53□□□□□ -0.72
CLCN3-205ENST00000506924 RAB34Q9BZG1 259 aa10.53□□□□□ -0.72
CLCN3-205ENST00000506924 CEP44Q9C0F1 390 aa10.53□□□□□ -0.72
CLCN3-205ENST00000506924 MTIF3Q9H2K0 278 aaKnown RBP10.53□□□□□ -0.72
CLCN3-205ENST00000506924 ADAMTS10Q9H324 1103 aa10.53□□□□□ -0.72
CLCN3-205ENST00000506924 ZSCAN16Q9H4T2 348 aaPredicted RBP10.53□□□□□ -0.72
CLCN3-205ENST00000506924 DDX19AQ9NUU7 478 aaKnown RBP10.53□□□□□ -0.72
CLCN3-205ENST00000506924 NOC2LQ9Y3T9 749 aaKnown RBP10.53□□□□□ -0.72
CLCN3-205ENST00000506924 ARID2Q68CP9 1835 aa10.53□□□□□ -0.72
CLCN3-205ENST00000506924 LAMA2P24043 3122 aaKnown RBP10.53□□□□□ -0.72
CLCN3-205ENST00000506924 LAMA3Q16787 3333 aa10.53□□□□□ -0.72
CLCN3-205ENST00000506924 A0A087WZ62 844 aa10.52□□□□□ -0.73
CLCN3-205ENST00000506924 IGKV6-21A0A0C4DH24 114 aa10.52□□□□□ -0.73
CLCN3-205ENST00000506924 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.52□□□□□ -0.73
CLCN3-205ENST00000506924 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.52□□□□□ -0.73
CLCN3-205ENST00000506924 E9PMD0 336 aa10.52□□□□□ -0.73
CLCN3-205ENST00000506924 DEAF1O75398 565 aaPredicted RBP10.52□□□□□ -0.73
CLCN3-205ENST00000506924 F13A1P00488 732 aa10.52□□□□□ -0.73
CLCN3-205ENST00000506924 SRGAP2CP0DJJ0 459 aa10.52□□□□□ -0.73
CLCN3-205ENST00000506924 ST13P50502 369 aaKnown RBP10.52□□□□□ -0.73
CLCN3-205ENST00000506924 DNM2P50570 870 aa10.52□□□□□ -0.73
CLCN3-205ENST00000506924 GPC3P51654 580 aa10.52□□□□□ -0.73
CLCN3-205ENST00000506924 C19orf57Q0VDD7 668 aa10.52□□□□□ -0.73
CLCN3-205ENST00000506924 PAK2Q13177 524 aa10.52□□□□□ -0.73
CLCN3-205ENST00000506924 HAUS3Q68CZ6 603 aa10.52□□□□□ -0.73
CLCN3-205ENST00000506924 TSHZ1Q6ZSZ6 1077 aa10.52□□□□□ -0.73
CLCN3-205ENST00000506924 KCNK18Q7Z418 384 aa10.52□□□□□ -0.73
CLCN3-205ENST00000506924 MYOCDQ8IZQ8 938 aa10.52□□□□□ -0.73
CLCN3-205ENST00000506924 CLIC6Q96NY7 704 aa10.52□□□□□ -0.73
CLCN3-205ENST00000506924 NACC1Q96RE7 527 aa10.52□□□□□ -0.73
CLCN3-205ENST00000506924 FDXACB1Q9BRP7 624 aaPredicted RBP10.52□□□□□ -0.73
CLCN3-205ENST00000506924 DHX33Q9H6R0 707 aaKnown RBP10.52□□□□□ -0.73
CLCN3-205ENST00000506924 GPRC5CQ9NQ84 441 aa10.52□□□□□ -0.73
CLCN3-205ENST00000506924 XPNPEP1Q9NQW7 623 aa10.52□□□□□ -0.73
CLCN3-205ENST00000506924 ANKEF1Q9NU02 776 aa10.52□□□□□ -0.73
CLCN3-205ENST00000506924 RNF19AQ9NV58 838 aa10.52□□□□□ -0.73
CLCN3-205ENST00000506924 PADI3Q9ULW8 664 aa10.52□□□□□ -0.73
CLCN3-205ENST00000506924 PTPRSQ13332 1948 aa10.52□□□□□ -0.73
CLCN3-205ENST00000506924 GBF1Q92538 1859 aa10.51□□□□□ -0.73
CLCN3-205ENST00000506924 MYH15Q9Y2K3 1946 aa10.51□□□□□ -0.73
CLCN3-205ENST00000506924 ABHD14A-ACY1A0A1B0GW23 586 aa10.51□□□□□ -0.73
CLCN3-205ENST00000506924 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.51□□□□□ -0.73
CLCN3-205ENST00000506924 ARHGEF35A5YM69 484 aa10.51□□□□□ -0.73
CLCN3-205ENST00000506924 DLL1O00548 723 aa10.51□□□□□ -0.73
CLCN3-205ENST00000506924 TM4SF5O14894 197 aa10.51□□□□□ -0.73
CLCN3-205ENST00000506924 RPS6KA5O75582 802 aa10.51□□□□□ -0.73
CLCN3-205ENST00000506924 BAIAP3O94812 1187 aa10.51□□□□□ -0.73
CLCN3-205ENST00000506924 RPLP2P05387 115 aaKnown RBP10.51□□□□□ -0.73
CLCN3-205ENST00000506924 COL8A1P27658 744 aa10.51□□□□□ -0.73
CLCN3-205ENST00000506924 CRYBB1P53674 252 aaPredicted RBP10.51□□□□□ -0.73
CLCN3-205ENST00000506924 SUZ12Q15022 739 aaKnown RBP10.51□□□□□ -0.73
CLCN3-205ENST00000506924 ARL6IP4Q66PJ3 421 aaKnown RBP10.51□□□□□ -0.73
CLCN3-205ENST00000506924 USP49Q70CQ1 688 aa10.51□□□□□ -0.73
CLCN3-205ENST00000506924 RTN4RL1Q86UN2 441 aaPredicted RBP10.51□□□□□ -0.73
CLCN3-205ENST00000506924 CABP7Q86V35 215 aa10.51□□□□□ -0.73
CLCN3-205ENST00000506924 FAM228AQ86W67 206 aa10.51□□□□□ -0.73
CLCN3-205ENST00000506924 PRPF31Q8WWY3 499 aaKnown RBP10.51□□□□□ -0.73
CLCN3-205ENST00000506924 CSRNP2Q9H175 543 aa10.51□□□□□ -0.73
CLCN3-205ENST00000506924 BHMT2Q9H2M3 363 aa10.51□□□□□ -0.73
CLCN3-205ENST00000506924 NKX2-4Q9H2Z4 354 aa10.51□□□□□ -0.73
CLCN3-205ENST00000506924 TMX1Q9H3N1 280 aa10.51□□□□□ -0.73
CLCN3-205ENST00000506924 ATP6V0A4Q9HBG4 840 aa10.51□□□□□ -0.73
CLCN3-205ENST00000506924 ST3GAL5Q9UNP4 418 aa10.51□□□□□ -0.73
CLCN3-205ENST00000506924 YBX2Q9Y2T7 364 aaKnown RBP10.51□□□□□ -0.73
CLCN3-205ENST00000506924 ZDHHC9Q9Y397 364 aa10.51□□□□□ -0.73
CLCN3-205ENST00000506924 KDM3AQ9Y4C1 1321 aa10.51□□□□□ -0.73
CLCN3-205ENST00000506924 MICAL3Q7RTP6 2002 aa10.5□□□□□ -0.73
CLCN3-205ENST00000506924 ENPP3O14638 875 aa10.5□□□□□ -0.73
CLCN3-205ENST00000506924 MGEA5O60502 916 aa10.5□□□□□ -0.73
CLCN3-205ENST00000506924 BMP15O95972 392 aa10.5□□□□□ -0.73
CLCN3-205ENST00000506924 AMHP03971 560 aa10.5□□□□□ -0.73
CLCN3-205ENST00000506924 SSBP05455 408 aaKnown RBP eCLIP10.5□□□□□ -0.73
CLCN3-205ENST00000506924 XRCC6P12956 609 aaKnown RBP eCLIP10.5□□□□□ -0.73
CLCN3-205ENST00000506924 DARSP14868 501 aaKnown RBP10.5□□□□□ -0.73
CLCN3-205ENST00000506924 SMAD3P84022 425 aaKnown RBP10.5□□□□□ -0.73
CLCN3-205ENST00000506924 LAMTOR4Q0VGL1 99 aa10.5□□□□□ -0.73
CLCN3-205ENST00000506924 GRB10Q13322 594 aa10.5□□□□□ -0.73
CLCN3-205ENST00000506924 STK38Q15208 465 aa10.5□□□□□ -0.73
CLCN3-205ENST00000506924 ZNF423Q2M1K9 1284 aa10.5□□□□□ -0.73
CLCN3-205ENST00000506924 FAM102BQ5T8I3 360 aa10.5□□□□□ -0.73
CLCN3-205ENST00000506924 IGF2-ASQ6U949 168 aa10.5□□□□□ -0.73
CLCN3-205ENST00000506924 HERC6Q8IVU3 1022 aa10.5□□□□□ -0.73
CLCN3-205ENST00000506924 PSPC1Q8WXF1 523 aaKnown RBP10.5□□□□□ -0.73
CLCN3-205ENST00000506924 LINC01599Q8WXQ3 324 aa10.5□□□□□ -0.73
CLCN3-205ENST00000506924 APBB2Q92870 758 aa10.5□□□□□ -0.73
CLCN3-205ENST00000506924 EPSTI1Q96J88 318 aa10.5□□□□□ -0.73
CLCN3-205ENST00000506924 ZNF396Q96N95 335 aaPredicted RBP10.5□□□□□ -0.73
CLCN3-205ENST00000506924 JPH2Q9BR39 696 aaPredicted RBP10.5□□□□□ -0.73
CLCN3-205ENST00000506924 POLR3FQ9H1D9 316 aaPredicted RBP10.5□□□□□ -0.73
CLCN3-205ENST00000506924 ERVK-5Q9HDB9 667 aa10.5□□□□□ -0.73
CLCN3-205ENST00000506924 VTI1BQ9UEU0 232 aa10.5□□□□□ -0.73
CLCN3-205ENST00000506924 FBXO2Q9UK22 296 aaPredicted RBP10.5□□□□□ -0.73
CLCN3-205ENST00000506924 DBR1Q9UK59 544 aaKnown RBP10.5□□□□□ -0.73
CLCN3-205ENST00000506924 COL4A3BPQ9Y5P4 624 aa10.5□□□□□ -0.73
CLCN3-205ENST00000506924 SZT2Q5T011 3432 aa10.49□□□□□ -0.73
CLCN3-205ENST00000506924 LCHNA4D1U4 455 aa10.49□□□□□ -0.73
CLCN3-205ENST00000506924 LONP1P36776 959 aaKnown RBP10.49□□□□□ -0.73
CLCN3-205ENST00000506924 UBA7P41226 1012 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms