RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 LACTBL1A8MY62 500 aa9.15□□□□□ -0.94
PDGFC-205ENST00000506880 PIRO00625 290 aa9.15□□□□□ -0.94
PDGFC-205ENST00000506880 LPXNO60711 386 aa9.15□□□□□ -0.94
PDGFC-205ENST00000506880 ZC3H11AO75152 810 aaKnown RBP eCLIP9.15□□□□□ -0.94
PDGFC-205ENST00000506880 FGF18O76093 207 aa9.15□□□□□ -0.94
PDGFC-205ENST00000506880 KIF4AO95239 1232 aa9.15□□□□□ -0.94
PDGFC-205ENST00000506880 SOD2P04179 222 aa9.15□□□□□ -0.94
PDGFC-205ENST00000506880 TMEM191BP0C7N4 346 aa9.15□□□□□ -0.94
PDGFC-205ENST00000506880 SRGAP2BP0DMP2 458 aa9.15□□□□□ -0.94
PDGFC-205ENST00000506880 CTSAP10619 480 aa9.15□□□□□ -0.94
PDGFC-205ENST00000506880 TYMPP19971 482 aa9.15□□□□□ -0.94
PDGFC-205ENST00000506880 AKAP5P24588 427 aa9.15□□□□□ -0.94
PDGFC-205ENST00000506880 CASP1P29466 404 aa9.15□□□□□ -0.94
PDGFC-205ENST00000506880 SCNN1GP51170 649 aa9.15□□□□□ -0.94
PDGFC-205ENST00000506880 RBP5P82980 135 aa9.15□□□□□ -0.94
PDGFC-205ENST00000506880 BFSP1Q12934 665 aa9.15□□□□□ -0.94
PDGFC-205ENST00000506880 USP41Q3LFD5 358 aa9.15□□□□□ -0.94
PDGFC-205ENST00000506880 SV2CQ496J9 727 aa9.15□□□□□ -0.94
PDGFC-205ENST00000506880 LRRC55Q6ZSA7 311 aa9.15□□□□□ -0.94
PDGFC-205ENST00000506880 ANKS3Q6ZW76 656 aa9.15□□□□□ -0.94
PDGFC-205ENST00000506880 ZBTB33Q86T24 672 aa9.15□□□□□ -0.94
PDGFC-205ENST00000506880 NELFCDQ8IXH7 590 aa9.15□□□□□ -0.94
PDGFC-205ENST00000506880 FAM186BQ8IYM0 893 aa9.15□□□□□ -0.94
PDGFC-205ENST00000506880 CSGALNACT2Q8N6G5 542 aa9.15□□□□□ -0.94
PDGFC-205ENST00000506880 CCDC150Q8NCX0 1101 aa9.15□□□□□ -0.94
PDGFC-205ENST00000506880 ANKRD20A12PQ8NF67 263 aa9.15□□□□□ -0.94
PDGFC-205ENST00000506880 NELFBQ8WX92 580 aa9.15□□□□□ -0.94
PDGFC-205ENST00000506880 KIF12Q96FN5 646 aa9.15□□□□□ -0.94
PDGFC-205ENST00000506880 SUSD3Q96L08 255 aa9.15□□□□□ -0.94
PDGFC-205ENST00000506880 CEP295NLQ96MC4 621 aa9.15□□□□□ -0.94
PDGFC-205ENST00000506880 HERC2P3Q9BVR0 1158 aa9.15□□□□□ -0.94
PDGFC-205ENST00000506880 HAPLN2Q9GZV7 340 aa9.15□□□□□ -0.94
PDGFC-205ENST00000506880 NKX2-4Q9H2Z4 354 aa9.15□□□□□ -0.94
PDGFC-205ENST00000506880 POLD4Q9HCU8 107 aa9.15□□□□□ -0.94
PDGFC-205ENST00000506880 TLR9Q9NR96 1032 aa9.15□□□□□ -0.94
PDGFC-205ENST00000506880 GDAP2Q9NXN4 497 aa9.15□□□□□ -0.94
PDGFC-205ENST00000506880 ARMCX3Q9UH62 379 aaPredicted RBP9.15□□□□□ -0.94
PDGFC-205ENST00000506880 PLAGL2Q9UPG8 496 aa9.15□□□□□ -0.94
PDGFC-205ENST00000506880 HES2Q9Y543 173 aa9.15□□□□□ -0.94
PDGFC-205ENST00000506880 SCN1AP35498 2009 aa9.15□□□□□ -0.94
PDGFC-205ENST00000506880 BRWD1Q9NSI6 2320 aa9.15□□□□□ -0.95
PDGFC-205ENST00000506880 MYO7AQ13402 2215 aa9.15□□□□□ -0.95
PDGFC-205ENST00000506880 PRRC2BQ5JSZ5 2229 aaKnown RBP9.15□□□□□ -0.95
PDGFC-205ENST00000506880 SMTNL1A8MU46 457 aa9.14□□□□□ -0.95
PDGFC-205ENST00000506880 H7C4K7 107 aa9.14□□□□□ -0.95
PDGFC-205ENST00000506880 M0QZQ0 153 aa9.14□□□□□ -0.95
PDGFC-205ENST00000506880 NRP1O14786 923 aa9.14□□□□□ -0.95
PDGFC-205ENST00000506880 FSCN2O14926 492 aa9.14□□□□□ -0.95
PDGFC-205ENST00000506880 PAPLNO95428 1278 aa9.14□□□□□ -0.95
PDGFC-205ENST00000506880 CYP11A1P05108 521 aa9.14□□□□□ -0.95
PDGFC-205ENST00000506880 TPM2P07951 284 aa9.14□□□□□ -0.95
PDGFC-205ENST00000506880 POU2F2P09086 479 aa9.14□□□□□ -0.95
PDGFC-205ENST00000506880 EEF1GP26641 437 aaKnown RBP9.14□□□□□ -0.95
PDGFC-205ENST00000506880 ACOT2P49753 483 aa9.14□□□□□ -0.95
PDGFC-205ENST00000506880 TAF6P49848 677 aa9.14□□□□□ -0.95
PDGFC-205ENST00000506880 VAMP7P51809 220 aa9.14□□□□□ -0.95
PDGFC-205ENST00000506880 RABGGTBP53611 331 aa9.14□□□□□ -0.95
PDGFC-205ENST00000506880 GPM6BQ13491 265 aa9.14□□□□□ -0.95
PDGFC-205ENST00000506880 SMC1AQ14683 1233 aaKnown RBP9.14□□□□□ -0.95
PDGFC-205ENST00000506880 COL19A1Q14993 1142 aa9.14□□□□□ -0.95
PDGFC-205ENST00000506880 ZACNQ401N2 412 aa9.14□□□□□ -0.95
PDGFC-205ENST00000506880 FMNL3Q8IVF7 1028 aa9.14□□□□□ -0.95
PDGFC-205ENST00000506880 SPDYE1Q8NFV5 336 aaPredicted RBP9.14□□□□□ -0.95
PDGFC-205ENST00000506880 SPPL3Q8TCT6 385 aa9.14□□□□□ -0.95
PDGFC-205ENST00000506880 PIK3R5Q8WYR1 880 aa9.14□□□□□ -0.95
PDGFC-205ENST00000506880 LPPQ93052 612 aa9.14□□□□□ -0.95
PDGFC-205ENST00000506880 JAKMIP2Q96AA8 810 aa9.14□□□□□ -0.95
PDGFC-205ENST00000506880 BORCS6Q96GS4 357 aa9.14□□□□□ -0.95
PDGFC-205ENST00000506880 ZFP42Q96MM3 310 aa9.14□□□□□ -0.95
PDGFC-205ENST00000506880 EMILIN2Q9BXX0 1053 aa9.14□□□□□ -0.95
PDGFC-205ENST00000506880 FGFBP2Q9BYJ0 223 aa9.14□□□□□ -0.95
PDGFC-205ENST00000506880 IMPG2Q9BZV3 1241 aa9.14□□□□□ -0.95
PDGFC-205ENST00000506880 TMEM8AQ9HCN3 771 aa9.14□□□□□ -0.95
PDGFC-205ENST00000506880 CHST7Q9NS84 486 aa9.14□□□□□ -0.95
PDGFC-205ENST00000506880 DPP3Q9NY33 737 aa9.14□□□□□ -0.95
PDGFC-205ENST00000506880 INPP5FQ9Y2H2 1132 aa9.14□□□□□ -0.95
PDGFC-205ENST00000506880 USP20Q9Y2K6 914 aa9.14□□□□□ -0.95
PDGFC-205ENST00000506880 COQ4Q9Y3A0 265 aa9.14□□□□□ -0.95
PDGFC-205ENST00000506880 BACE2Q9Y5Z0 518 aa9.14□□□□□ -0.95
PDGFC-205ENST00000506880 PLXNA4Q9HCM2 1894 aa9.14□□□□□ -0.95
PDGFC-205ENST00000506880 PODXLO00592 558 aa9.13□□□□□ -0.95
PDGFC-205ENST00000506880 TADA2AO75478 443 aa9.13□□□□□ -0.95
PDGFC-205ENST00000506880 B3GAT3O94766 335 aa9.13□□□□□ -0.95
PDGFC-205ENST00000506880 DDHD2O94830 711 aa9.13□□□□□ -0.95
PDGFC-205ENST00000506880 OAZ2O95190 189 aa9.13□□□□□ -0.95
PDGFC-205ENST00000506880 POMCP01189 267 aa9.13□□□□□ -0.95
PDGFC-205ENST00000506880 URODP06132 367 aa9.13□□□□□ -0.95
PDGFC-205ENST00000506880 TNNI1P19237 187 aa9.13□□□□□ -0.95
PDGFC-205ENST00000506880 BMP6P22004 513 aa9.13□□□□□ -0.95
PDGFC-205ENST00000506880 FGFR3P22607 806 aa9.13□□□□□ -0.95
PDGFC-205ENST00000506880 RFX1P22670 979 aa9.13□□□□□ -0.95
PDGFC-205ENST00000506880 SLC11A1P49279 550 aa9.13□□□□□ -0.95
PDGFC-205ENST00000506880 CYP2J2P51589 502 aa9.13□□□□□ -0.95
PDGFC-205ENST00000506880 TPM4P67936 248 aa9.13□□□□□ -0.95
PDGFC-205ENST00000506880 DSG1Q02413 1049 aa9.13□□□□□ -0.95
PDGFC-205ENST00000506880 CAMK4Q16566 473 aa9.13□□□□□ -0.95
PDGFC-205ENST00000506880 SGSM1Q2NKQ1 1148 aa9.13□□□□□ -0.95
PDGFC-205ENST00000506880 C9orf57Q5W0N0 161 aa9.13□□□□□ -0.95
PDGFC-205ENST00000506880 KRT39Q6A163 491 aa9.13□□□□□ -0.95
PDGFC-205ENST00000506880 ANKRD40Q6AI12 368 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms