RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 SPATA1Q5VX52 437 aa9.57□□□□□ -0.88
SCAMP1-202ENST00000506858 GAS2L3Q86XJ1 694 aa9.57□□□□□ -0.88
SCAMP1-202ENST00000506858 URGCPQ8TCY9 931 aa9.57□□□□□ -0.88
SCAMP1-202ENST00000506858 PARD3BQ8TEW8 1205 aa9.57□□□□□ -0.88
SCAMP1-202ENST00000506858 BCL7CQ8WUZ0 217 aaPredicted RBP9.57□□□□□ -0.88
SCAMP1-202ENST00000506858 PPP1R10Q96QC0 940 aaKnown RBP9.57□□□□□ -0.88
SCAMP1-202ENST00000506858 GTPBP4Q9BZE4 634 aaKnown RBP9.57□□□□□ -0.88
SCAMP1-202ENST00000506858 MTMR12Q9C0I1 747 aa9.57□□□□□ -0.88
SCAMP1-202ENST00000506858 HSD3B7Q9H2F3 369 aa9.57□□□□□ -0.88
SCAMP1-202ENST00000506858 CNTN3Q9P232 1028 aa9.57□□□□□ -0.88
SCAMP1-202ENST00000506858 CGNQ9P2M7 1197 aaKnown RBP9.57□□□□□ -0.88
SCAMP1-202ENST00000506858 DACH1Q9UI36 760 aa9.57□□□□□ -0.88
SCAMP1-202ENST00000506858 PCDHGA4Q9Y5G9 962 aa9.57□□□□□ -0.88
SCAMP1-202ENST00000506858 LINC01553A4QN01 128 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 LINC00271P0C7V0 271 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 EPB41P11171 864 aaKnown RBP9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 ATP1A3P13637 1013 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 KCNE1P15382 129 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 TNNI1P19237 187 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 PPP1R2P41236 205 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 OR1G1P47890 313 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 GCLMP48507 274 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 CLCNKBP51801 687 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 VAMP7P51809 220 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 BCAR1P56945 870 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 TAP1Q03518 808 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 TMEM132DQ14C87 1099 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 PSMD6Q15008 389 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 IQCB1Q15051 598 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 ZBTB6Q15916 424 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 NFIL3Q16649 462 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 TCERG1LQ5VWI1 586 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 LRSAM1Q6UWE0 723 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 FILIP1Q7Z7B0 1213 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 COLGALT2Q8IYK4 626 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 FIBCD1Q8N539 461 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 C3orf58Q8NDZ4 430 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 ENOX1Q8TC92 643 aaKnown RBP9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 CNOT6LQ96LI5 555 aaKnown RBP9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 FAM193BQ96PV7 902 aaPredicted RBP9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 TSPY26PQ9H489 355 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 UBN1Q9NPG3 1134 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 CITO14578 2027 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 FNDC1Q4ZHG4 1894 aaPredicted RBP9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 EPOPA6NHQ4 379 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 NRP1O14786 923 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 HOXA2O43364 376 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 CST3P01034 146 aaPredicted RBP9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 GALTP07902 379 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 DNAJB2P25686 324 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 CDR1P51861 262 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 MYBPC2Q14324 1141 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 CD300LGQ6UXG3 332 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 TAS1R1Q7RTX1 841 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 CMTR2Q8IYT2 770 aaKnown RBP9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 ZNF687Q8N1G0 1237 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 C1orf127Q8N9H9 656 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 ARNTL2Q8WYA1 636 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 B3GALT6Q96L58 329 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 CEP63Q96MT8 703 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 FAM161BQ96MY7 647 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 FNBP1Q96RU3 617 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 PLEKHA5Q9HAU0 1116 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 KIAA1586Q9HCI6 787 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 INTS13Q9NVM9 706 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 DPP3Q9NY33 737 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 TAB2Q9NYJ8 693 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 ARMCX3Q9UH62 379 aaPredicted RBP9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 SIX4Q9UIU6 781 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 PCDHA11Q9Y5I1 949 aa9.56□□□□□ -0.88
SCAMP1-202ENST00000506858 TRANK1O15050 2925 aa9.55□□□□□ -0.88
SCAMP1-202ENST00000506858 GBF1Q92538 1859 aa9.55□□□□□ -0.88
SCAMP1-202ENST00000506858 KIAA0391O15091 583 aaKnown RBP9.55□□□□□ -0.88
SCAMP1-202ENST00000506858 SPTLC1O15269 473 aa9.55□□□□□ -0.88
SCAMP1-202ENST00000506858 INPPL1O15357 1258 aa9.55□□□□□ -0.88
SCAMP1-202ENST00000506858 IL18RAPO95256 599 aa9.55□□□□□ -0.88
SCAMP1-202ENST00000506858 ITGB3P05106 788 aa9.55□□□□□ -0.88
SCAMP1-202ENST00000506858 KRT19P08727 400 aa9.55□□□□□ -0.88
SCAMP1-202ENST00000506858 KRT13P13646 458 aa9.55□□□□□ -0.88
SCAMP1-202ENST00000506858 POLR2BP30876 1174 aaKnown RBP9.55□□□□□ -0.88
SCAMP1-202ENST00000506858 MTIF2P46199 727 aaKnown RBP9.55□□□□□ -0.88
SCAMP1-202ENST00000506858 BRCC3P46736 316 aa9.55□□□□□ -0.88
SCAMP1-202ENST00000506858 ZNF445P59923 1031 aa9.55□□□□□ -0.88
SCAMP1-202ENST00000506858 MYL5Q02045 173 aa9.55□□□□□ -0.88
SCAMP1-202ENST00000506858 DSC1Q08554 894 aa9.55□□□□□ -0.88
SCAMP1-202ENST00000506858 BFSP1Q12934 665 aa9.55□□□□□ -0.88
SCAMP1-202ENST00000506858 GRIK3Q13003 919 aa9.55□□□□□ -0.88
SCAMP1-202ENST00000506858 TUSC3Q13454 348 aa9.55□□□□□ -0.88
SCAMP1-202ENST00000506858 KYAT1Q16773 422 aa9.55□□□□□ -0.88
SCAMP1-202ENST00000506858 CBWD6Q4V339 395 aa9.55□□□□□ -0.88
SCAMP1-202ENST00000506858 CBWD3Q5JTY5 395 aa9.55□□□□□ -0.88
SCAMP1-202ENST00000506858 CBWD5Q5RIA9 395 aa9.55□□□□□ -0.88
SCAMP1-202ENST00000506858 TDRD10Q5VZ19 366 aaKnown RBP9.55□□□□□ -0.88
SCAMP1-202ENST00000506858 KCNT2Q6UVM3 1135 aa9.55□□□□□ -0.88
SCAMP1-202ENST00000506858 SV2AQ7L0J3 742 aa9.55□□□□□ -0.88
SCAMP1-202ENST00000506858 TRAPPC11Q7Z392 1133 aa9.55□□□□□ -0.88
SCAMP1-202ENST00000506858 LRRC43Q8N309 656 aa9.55□□□□□ -0.88
SCAMP1-202ENST00000506858 COLGALT1Q8NBJ5 622 aa9.55□□□□□ -0.88
SCAMP1-202ENST00000506858 TIFAQ96CG3 184 aa9.55□□□□□ -0.88
SCAMP1-202ENST00000506858 CGRRF1Q99675 332 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms