RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 TAF4BQ92750 862 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 RPGRIP1Q96KN7 1286 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 ZCCHC17Q9NP64 241 aaKnown RBP13.09□□□□□ -0.31
LIN54-206ENST00000506560 RNF19AQ9NV58 838 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 ALG6Q9Y672 507 aa13.09□□□□□ -0.31
LIN54-206ENST00000506560 TRIP11Q15643 1979 aa13.08□□□□□ -0.31
LIN54-206ENST00000506560 GUCY2FP51841 1108 aa13.08□□□□□ -0.32
LIN54-206ENST00000506560 OLFML2BQ68BL8 750 aa13.08□□□□□ -0.32
LIN54-206ENST00000506560 ZNF467Q7Z7K2 595 aaPredicted RBP13.08□□□□□ -0.32
LIN54-206ENST00000506560 USP38Q8NB14 1042 aa13.08□□□□□ -0.32
LIN54-206ENST00000506560 ZNF653Q96CK0 615 aa13.08□□□□□ -0.32
LIN54-206ENST00000506560 CYFIP2Q96F07 1278 aa13.08□□□□□ -0.32
LIN54-206ENST00000506560 NOC2LQ9Y3T9 749 aaKnown RBP13.08□□□□□ -0.32
LIN54-206ENST00000506560 PCDHB4Q9Y5E5 795 aa13.08□□□□□ -0.32
LIN54-206ENST00000506560 ATP8B3O60423 1300 aa13.08□□□□□ -0.32
LIN54-206ENST00000506560 LOC102724159A0A0B4J2E5 919 aa13.08□□□□□ -0.32
LIN54-206ENST00000506560 KIAA0391O15091 583 aaKnown RBP13.08□□□□□ -0.32
LIN54-206ENST00000506560 GAS2O43903 313 aaKnown RBP13.08□□□□□ -0.32
LIN54-206ENST00000506560 GJB6O95452 261 aa13.08□□□□□ -0.32
LIN54-206ENST00000506560 NFICP08651 508 aa13.08□□□□□ -0.32
LIN54-206ENST00000506560 WEE2P0C1S8 567 aa13.08□□□□□ -0.32
LIN54-206ENST00000506560 CYP2B6P20813 491 aa13.08□□□□□ -0.32
LIN54-206ENST00000506560 ABCD1P33897 745 aa13.08□□□□□ -0.32
LIN54-206ENST00000506560 GPC5P78333 572 aa13.08□□□□□ -0.32
LIN54-206ENST00000506560 PPFIA1Q13136 1202 aa13.08□□□□□ -0.32
LIN54-206ENST00000506560 PWP2Q15269 919 aaKnown RBP13.08□□□□□ -0.32
LIN54-206ENST00000506560 TAF1CQ15572 869 aaPredicted RBP13.08□□□□□ -0.32
LIN54-206ENST00000506560 GRIK4Q16099 956 aa13.08□□□□□ -0.32
LIN54-206ENST00000506560 IFI16Q16666 785 aaKnown RBP13.08□□□□□ -0.32
LIN54-206ENST00000506560 KRT222Q8N1A0 295 aa13.08□□□□□ -0.32
LIN54-206ENST00000506560 HNRNPLLQ8WVV9 542 aaKnown RBP13.08□□□□□ -0.32
LIN54-206ENST00000506560 ZSWIM1Q9BR11 485 aa13.08□□□□□ -0.32
LIN54-206ENST00000506560 NUP85Q9BW27 656 aa13.08□□□□□ -0.32
LIN54-206ENST00000506560 FAM49AQ9H0Q0 323 aaPredicted RBP13.08□□□□□ -0.32
LIN54-206ENST00000506560 ABHD16BQ9H3Z7 469 aa13.08□□□□□ -0.32
LIN54-206ENST00000506560 CDHR5Q9HBB8 845 aa13.08□□□□□ -0.32
LIN54-206ENST00000506560 AMFRQ9UKV5 643 aa13.08□□□□□ -0.32
LIN54-206ENST00000506560 H3BQF6 201 aa13.07□□□□□ -0.32
LIN54-206ENST00000506560 MAP2K7O14733 419 aa13.07□□□□□ -0.32
LIN54-206ENST00000506560 ZC3H11AO75152 810 aaKnown RBP eCLIP13.07□□□□□ -0.32
LIN54-206ENST00000506560 PPFIA4O75335 1185 aa13.07□□□□□ -0.32
LIN54-206ENST00000506560 ARF4P18085 180 aaPredicted RBP13.07□□□□□ -0.32
LIN54-206ENST00000506560 CTGFP29279 349 aa13.07□□□□□ -0.32
LIN54-206ENST00000506560 KIZQ2M2Z5 673 aa13.07□□□□□ -0.32
LIN54-206ENST00000506560 ZNF484Q5JVG2 852 aa13.07□□□□□ -0.32
LIN54-206ENST00000506560 EMID1Q96A84 441 aaPredicted RBP13.07□□□□□ -0.32
LIN54-206ENST00000506560 POLIQ9UNA4 740 aa13.07□□□□□ -0.32
LIN54-206ENST00000506560 GZMAP12544 262 aa13.07□□□□□ -0.32
LIN54-206ENST00000506560 UNGP13051 313 aaPredicted RBP13.07□□□□□ -0.32
LIN54-206ENST00000506560 COMTP21964 271 aa13.07□□□□□ -0.32
LIN54-206ENST00000506560 MAPK4P31152 587 aa13.07□□□□□ -0.32
LIN54-206ENST00000506560 RAP1GAPP47736 663 aa13.07□□□□□ -0.32
LIN54-206ENST00000506560 ITIH3Q06033 890 aa13.07□□□□□ -0.32
LIN54-206ENST00000506560 ORC1Q13415 861 aa13.07□□□□□ -0.32
LIN54-206ENST00000506560 TFDP1Q14186 410 aa13.07□□□□□ -0.32
LIN54-206ENST00000506560 CLEC16AQ2KHT3 1053 aa13.07□□□□□ -0.32
LIN54-206ENST00000506560 MORN1Q5T089 497 aa13.07□□□□□ -0.32
LIN54-206ENST00000506560 C8orf74Q6P047 294 aa13.07□□□□□ -0.32
LIN54-206ENST00000506560 CCNI2Q6ZMN8 369 aaPredicted RBP13.07□□□□□ -0.32
LIN54-206ENST00000506560 KIAA0319LQ8IZA0 1049 aa13.07□□□□□ -0.32
LIN54-206ENST00000506560 RBBP8NLQ8NC74 664 aaPredicted RBP13.07□□□□□ -0.32
LIN54-206ENST00000506560 DDX47Q9H0S4 455 aaKnown RBP13.07□□□□□ -0.32
LIN54-206ENST00000506560 C2orf40Q9H1Z8 148 aa13.07□□□□□ -0.32
LIN54-206ENST00000506560 PPME1Q9Y570 386 aa13.07□□□□□ -0.32
LIN54-206ENST00000506560 RAD51CO43502 376 aa13.06□□□□□ -0.32
LIN54-206ENST00000506560 ASS1P00966 412 aaKnown RBP13.06□□□□□ -0.32
LIN54-206ENST00000506560 ZNF200P98182 395 aaPredicted RBP13.06□□□□□ -0.32
LIN54-206ENST00000506560 BEX3Q00994 111 aa13.06□□□□□ -0.32
LIN54-206ENST00000506560 TNFAIP2Q03169 654 aa13.06□□□□□ -0.32
LIN54-206ENST00000506560 GRM1Q13255 1194 aa13.06□□□□□ -0.32
LIN54-206ENST00000506560 CASP8Q14790 479 aa13.06□□□□□ -0.32
LIN54-206ENST00000506560 WDR49Q8IV35 697 aa13.06□□□□□ -0.32
LIN54-206ENST00000506560 FMNL3Q8IVF7 1028 aa13.06□□□□□ -0.32
LIN54-206ENST00000506560 ZNF564Q8TBZ8 553 aaPredicted RBP13.06□□□□□ -0.32
LIN54-206ENST00000506560 NLRP7Q8WX94 980 aa13.06□□□□□ -0.32
LIN54-206ENST00000506560 VTI1AQ96AJ9 217 aa13.06□□□□□ -0.32
LIN54-206ENST00000506560 PDZD7Q9H5P4 517 aa13.06□□□□□ -0.32
LIN54-206ENST00000506560 TMEM59LQ9UK28 342 aa13.06□□□□□ -0.32
LIN54-206ENST00000506560 TARSL2A2RTX5 802 aaKnown RBP13.06□□□□□ -0.32
LIN54-206ENST00000506560 RRM1P23921 792 aa13.06□□□□□ -0.32
LIN54-206ENST00000506560 ENPEPQ07075 957 aa13.06□□□□□ -0.32
LIN54-206ENST00000506560 ACAD10Q6JQN1 1059 aa13.06□□□□□ -0.32
LIN54-206ENST00000506560 SAPCD2Q86UD0 394 aa13.06□□□□□ -0.32
LIN54-206ENST00000506560 LMBR1Q8WVP7 490 aa13.06□□□□□ -0.32
LIN54-206ENST00000506560 KAT2BQ92831 832 aa13.06□□□□□ -0.32
LIN54-206ENST00000506560 SCLT1Q96NL6 688 aa13.06□□□□□ -0.32
LIN54-206ENST00000506560 XYLT2Q9H1B5 865 aa13.06□□□□□ -0.32
LIN54-206ENST00000506560 CNOT8Q9UFF9 292 aaKnown RBP13.06□□□□□ -0.32
LIN54-206ENST00000506560 SIX4Q9UIU6 781 aa13.06□□□□□ -0.32
LIN54-206ENST00000506560 TNFSF13BQ9Y275 285 aa13.06□□□□□ -0.32
LIN54-206ENST00000506560 ZSWIM8A7E2V4 1837 aa13.05□□□□□ -0.32
LIN54-206ENST00000506560 SLC15A5A6NIM6 579 aa13.05□□□□□ -0.32
LIN54-206ENST00000506560 LACTBL1A8MY62 500 aa13.05□□□□□ -0.32
LIN54-206ENST00000506560 FGGP02679 453 aa13.05□□□□□ -0.32
LIN54-206ENST00000506560 KRT19P08727 400 aa13.05□□□□□ -0.32
LIN54-206ENST00000506560 GYS2P54840 703 aa13.05□□□□□ -0.32
LIN54-206ENST00000506560 ZDHHC14Q8IZN3 488 aa13.05□□□□□ -0.32
LIN54-206ENST00000506560 SYCE1Q8N0S2 351 aa13.05□□□□□ -0.32
LIN54-206ENST00000506560 JPH2Q9BR39 696 aaPredicted RBP13.05□□□□□ -0.32
LIN54-206ENST00000506560 ERVK-5Q9HDB9 667 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms