RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 DLGAP5Q15398 846 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 ZNF568Q3ZCX4 644 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 CEP55Q53EZ4 464 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 SYT10Q6XYQ8 523 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 CPNE8Q86YQ8 564 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 SCYL3Q8IZE3 742 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 CPXCR1Q8N123 301 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 CCDC150Q8NCX0 1101 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 GRIN3AQ8TCU5 1115 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 SH2D3AQ9BRG2 576 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 PDCD2LQ9BRP1 358 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 ST6GALNAC4Q9H4F1 302 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 ZNF287Q9HBT7 754 aa6.45□□□□□ -1.38
SCLT1-207ENST00000506233 TNPO3Q9Y5L0 923 aaKnown RBP6.45□□□□□ -1.38
SCLT1-207ENST00000506233 GOLGA6L4A6NEF3 574 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 DYNC1I1O14576 645 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 ARHGAP6O43182 974 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 DDNO94850 711 aaPredicted RBP6.44□□□□□ -1.38
SCLT1-207ENST00000506233 TNNT1P13805 278 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 POU5F1Q01860 360 aaKnown RBP6.44□□□□□ -1.38
SCLT1-207ENST00000506233 DRP2Q13474 957 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 UBAP2Q5T6F2 1119 aaKnown RBP6.44□□□□□ -1.38
SCLT1-207ENST00000506233 KLHL10Q6JEL2 608 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 CCDC174Q6PII3 467 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 VHLLQ6RSH7 139 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 ANKS1BQ7Z6G8 1248 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 SFR1Q86XK3 245 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 CCDC116Q8IYX3 515 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 GPC2Q8N158 579 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 SLC7A14Q8TBB6 771 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 SEMA4DQ92854 862 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 FAM20AQ96MK3 541 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 CDK15Q96Q40 435 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 PTPN18Q99952 460 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 NTPCRQ9BSD7 190 aaKnown RBP6.44□□□□□ -1.38
SCLT1-207ENST00000506233 RAVER2Q9HCJ3 691 aaKnown RBP6.44□□□□□ -1.38
SCLT1-207ENST00000506233 AIPL1Q9NZN9 384 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 A0A1W2PQU0 124 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 GOLGA6CA6NDK9 693 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 GOLGA6BA6NDN3 693 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 ANKRD63C9JTQ0 380 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 MPHOSPH10O00566 681 aaKnown RBP6.44□□□□□ -1.38
SCLT1-207ENST00000506233 WDR46O15213 610 aaKnown RBP6.44□□□□□ -1.38
SCLT1-207ENST00000506233 ATP1A1P05023 1023 aaKnown RBP6.44□□□□□ -1.38
SCLT1-207ENST00000506233 ASGR2P07307 311 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 GOLGA6DP0CG33 693 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 CHRNB2P17787 502 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 SLC9A1P19634 815 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 GUCY2CP25092 1073 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 GSDMDP57764 484 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 ZNF571Q7Z3V5 609 aaPredicted RBP6.44□□□□□ -1.38
SCLT1-207ENST00000506233 NOA1Q8NC60 698 aaKnown RBP6.44□□□□□ -1.38
SCLT1-207ENST00000506233 ELMO3Q96BJ8 720 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 RPAP3Q9H6T3 665 aaPredicted RBP6.44□□□□□ -1.38
SCLT1-207ENST00000506233 GPRC5CQ9NQ84 441 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 A1CFQ9NQ94 594 aaKnown RBP6.44□□□□□ -1.38
SCLT1-207ENST00000506233 GOLGA6AQ9NYA3 693 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 RBPJLQ9UBG7 517 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 PHTF1Q9UMS5 762 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 COG5Q9UP83 839 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 KCNH4Q9UQ05 1017 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 PLD2O14939 933 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 SMC2O95347 1197 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 TBC1D8O95759 1140 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 HLA-DOAP06340 250 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 ADRB2P07550 413 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 ARSDP51689 593 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 TRIM32Q13049 653 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 LRRC27Q9C0I9 530 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 NDST4Q9H3R1 872 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 RAB21Q9UL25 225 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 NME7Q9Y5B8 376 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 STYXL1Q9Y6J8 313 aa6.44□□□□□ -1.38
SCLT1-207ENST00000506233 TRIP12Q14669 1992 aaPredicted RBP6.43□□□□□ -1.38
SCLT1-207ENST00000506233 LRRC53A6NM62 1247 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 BECN2A8MW95 431 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 SPATA31C2B4DYI2 1134 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 ZNF185O15231 689 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 NDUFA10O95299 355 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 PF4V1P10720 104 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 HOXA7P31268 230 aaPredicted RBP6.43□□□□□ -1.38
SCLT1-207ENST00000506233 RBM10P98175 930 aaKnown RBP6.43□□□□□ -1.38
SCLT1-207ENST00000506233 GTF2BQ00403 316 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 PPP3CAQ08209 521 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 EPC2Q52LR7 807 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 KLHDC7AQ5VTJ3 777 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 CCDC62Q6P9F0 684 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 C16orf54Q6UWD8 224 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 RINLQ6ZS11 566 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 SLFN11Q7Z7L1 901 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 CCNJLQ8IV13 435 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 TEX19Q8NA77 164 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 ZSWIM1Q9BR11 485 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 NAT10Q9H0A0 1025 aaKnown RBP6.43□□□□□ -1.38
SCLT1-207ENST00000506233 FBRSQ9HAH7 460 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 FAM86C1Q9NVL1 165 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 GSTTP1A0A1W2PQM5 241 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 AKR1B15C9JRZ8 316 aaPredicted RBP6.43□□□□□ -1.38
SCLT1-207ENST00000506233 MAP2K7O14733 419 aa6.43□□□□□ -1.38
SCLT1-207ENST00000506233 HRO43593 1189 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms