RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 API5Q9BZZ5 524 aaKnown RBP3.82□□□□□ -1.8
TCOF1-208ENST00000506063 NRSN2Q9GZP1 204 aa3.82□□□□□ -1.8
TCOF1-208ENST00000506063 IL21RQ9HBE5 538 aa3.82□□□□□ -1.8
TCOF1-208ENST00000506063 CACNG4Q9UBN1 327 aa3.82□□□□□ -1.8
TCOF1-208ENST00000506063 ANAPC4Q9UJX5 808 aa3.82□□□□□ -1.8
TCOF1-208ENST00000506063 EXOC6BQ9Y2D4 811 aa3.82□□□□□ -1.8
TCOF1-208ENST00000506063 BTBD3Q9Y2F9 522 aa3.82□□□□□ -1.8
TCOF1-208ENST00000506063 RP1L1Q8IWN7 2480 aaPredicted RBP3.82□□□□□ -1.8
TCOF1-208ENST00000506063 ESYT2A0FGR8 921 aa3.81□□□□□ -1.8
TCOF1-208ENST00000506063 GCOM1H8Y6P7 765 aaPredicted RBP3.81□□□□□ -1.8
TCOF1-208ENST00000506063 HBP1O60381 514 aa3.81□□□□□ -1.8
TCOF1-208ENST00000506063 RANBP6O60518 1105 aaKnown RBP3.81□□□□□ -1.8
TCOF1-208ENST00000506063 CCNE2O96020 404 aa3.81□□□□□ -1.8
TCOF1-208ENST00000506063 POLR2MP0CAP2 368 aa3.81□□□□□ -1.8
TCOF1-208ENST00000506063 GJA1P17302 382 aa3.81□□□□□ -1.8
TCOF1-208ENST00000506063 HOXB4P17483 251 aaPredicted RBP3.81□□□□□ -1.8
TCOF1-208ENST00000506063 OR1G1P47890 313 aa3.81□□□□□ -1.8
TCOF1-208ENST00000506063 ATXN3P54252 364 aaPredicted RBP3.81□□□□□ -1.8
TCOF1-208ENST00000506063 TMPRSS3P57727 454 aa3.81□□□□□ -1.8
TCOF1-208ENST00000506063 ACTR2P61160 394 aa3.81□□□□□ -1.8
TCOF1-208ENST00000506063 BNC1Q01954 994 aa3.81□□□□□ -1.8
TCOF1-208ENST00000506063 CREMQ03060 361 aa3.81□□□□□ -1.8
TCOF1-208ENST00000506063 DRP2Q13474 957 aa3.81□□□□□ -1.8
TCOF1-208ENST00000506063 NUMA1Q14980 2115 aa3.81□□□□□ -1.8
TCOF1-208ENST00000506063 TBC1D25Q3MII6 688 aa3.81□□□□□ -1.8
TCOF1-208ENST00000506063 PREPLQ4J6C6 727 aaPredicted RBP3.81□□□□□ -1.8
TCOF1-208ENST00000506063 C2orf27AQ580R0 203 aa3.81□□□□□ -1.8
TCOF1-208ENST00000506063 SPDYCQ5MJ68 293 aa3.81□□□□□ -1.8
TCOF1-208ENST00000506063 UBXN11Q5T124 520 aa3.81□□□□□ -1.8
TCOF1-208ENST00000506063 LYSMD4Q5XG99 296 aa3.81□□□□□ -1.8
TCOF1-208ENST00000506063 RTL10Q7L3V2 364 aa3.81□□□□□ -1.8
TCOF1-208ENST00000506063 LPCAT2Q7L5N7 544 aa3.81□□□□□ -1.8
TCOF1-208ENST00000506063 TMPRSS12Q86WS5 348 aa3.81□□□□□ -1.8
TCOF1-208ENST00000506063 SLC41A1Q8IVJ1 513 aa3.81□□□□□ -1.8
TCOF1-208ENST00000506063 ARID3BQ8IVW6 561 aaPredicted RBP3.81□□□□□ -1.8
TCOF1-208ENST00000506063 CCDC60Q8IWA6 550 aaPredicted RBP3.81□□□□□ -1.8
TCOF1-208ENST00000506063 HS6ST3Q8IZP7 471 aa3.81□□□□□ -1.8
TCOF1-208ENST00000506063 CMTR1Q8N1G2 835 aaKnown RBP3.81□□□□□ -1.8
TCOF1-208ENST00000506063 CEP76Q8TAP6 659 aa3.81□□□□□ -1.8
TCOF1-208ENST00000506063 RHPN1Q8TCX5 695 aa3.81□□□□□ -1.8
TCOF1-208ENST00000506063 RABGGTAQ92696 567 aa3.81□□□□□ -1.8
TCOF1-208ENST00000506063 SEC62Q99442 399 aaKnown RBP3.81□□□□□ -1.8
TCOF1-208ENST00000506063 PAAF1Q9BRP4 392 aa3.81□□□□□ -1.8
TCOF1-208ENST00000506063 AMNQ9BXJ7 453 aa3.81□□□□□ -1.8
TCOF1-208ENST00000506063 LRRC3Q9BY71 257 aa3.81□□□□□ -1.8
TCOF1-208ENST00000506063 FAM117AQ9C073 453 aa3.81□□□□□ -1.8
TCOF1-208ENST00000506063 CSRNP2Q9H175 543 aa3.81□□□□□ -1.8
TCOF1-208ENST00000506063 C1orf115Q9H7X2 142 aa3.81□□□□□ -1.8
TCOF1-208ENST00000506063 RSAD1Q9HA92 442 aa3.81□□□□□ -1.8
TCOF1-208ENST00000506063 PRDM16Q9HAZ2 1276 aa3.81□□□□□ -1.8
TCOF1-208ENST00000506063 JPH1Q9HDC5 661 aaPredicted RBP3.81□□□□□ -1.8
TCOF1-208ENST00000506063 HPS4Q9NQG7 708 aa3.81□□□□□ -1.8
TCOF1-208ENST00000506063 KANSL3Q9P2N6 904 aa3.81□□□□□ -1.8
TCOF1-208ENST00000506063 ADAM28Q9UKQ2 775 aa3.81□□□□□ -1.8
TCOF1-208ENST00000506063 PCDHB2Q9Y5E7 798 aa3.81□□□□□ -1.8
TCOF1-208ENST00000506063 HEMK1Q9Y5R4 338 aaPredicted RBP3.81□□□□□ -1.8
TCOF1-208ENST00000506063 UBIAD1Q9Y5Z9 338 aa3.81□□□□□ -1.8
TCOF1-208ENST00000506063 STK24Q9Y6E0 443 aa3.81□□□□□ -1.8
TCOF1-208ENST00000506063 ZNF469Q96JG9 3925 aaPredicted RBP3.81□□□□□ -1.8
TCOF1-208ENST00000506063 ESPL1Q14674 2120 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 ANAPC1Q9H1A4 1944 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 WIPF3A6NGB9 483 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 K7ENP7 123 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 MEIS2O14770 477 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 PRAMEF12O95522 483 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 ZNF883P0CG24 379 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 SKIP12755 728 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 PTPN2P17706 415 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 GNAT2P19087 354 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 IGFBP6P24592 240 aaPredicted RBP3.8□□□□□ -1.8
TCOF1-208ENST00000506063 U2AF2P26368 475 aaKnown RBP eCLIP3.8□□□□□ -1.8
TCOF1-208ENST00000506063 HOXA11P31270 313 aaPredicted RBP3.8□□□□□ -1.8
TCOF1-208ENST00000506063 DPP6P42658 865 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 SLC26A2P50443 739 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 RAB27AP51159 221 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 VAC14Q08AM6 782 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 SCRN1Q12765 414 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 GRIK2Q13002 908 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 ITGB3BPQ13352 177 aaPredicted RBP3.8□□□□□ -1.8
TCOF1-208ENST00000506063 TEAD2Q15562 447 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 IGFBP7Q16270 282 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 PSMD5Q16401 504 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 ZNF484Q5JVG2 852 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 STXBP5Q5T5C0 1151 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 TWF2Q6IBS0 349 aaKnown RBP3.8□□□□□ -1.8
TCOF1-208ENST00000506063 ANO7Q6IWH7 933 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 INO80CQ6PI98 192 aaPredicted RBP3.8□□□□□ -1.8
TCOF1-208ENST00000506063 ABHD15Q6UXT9 468 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 TMEM92Q6UXU6 159 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 POTEDQ86YR6 584 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 GPIHBP1Q8IV16 184 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 STAG2Q8N3U4 1231 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 LRRC71Q8N4P6 559 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 SMG8Q8ND04 991 aaKnown RBP3.8□□□□□ -1.8
TCOF1-208ENST00000506063 TSTD1Q8NFU3 115 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 RIN3Q8TB24 985 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 SHKBP1Q8TBC3 707 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 URGCPQ8TCY9 931 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 ARHGAP45Q92619 1136 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 ZFP42Q96MM3 310 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms