RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 C8AP07357 584 aa11.37□□□□□ -0.59
NR1I3-222ENST00000506018 CLTAP09496 248 aa11.37□□□□□ -0.59
NR1I3-222ENST00000506018 ELF1P32519 619 aa11.37□□□□□ -0.59
NR1I3-222ENST00000506018 PPP2R3AQ06190 1150 aa11.37□□□□□ -0.59
NR1I3-222ENST00000506018 MCL1Q07820 350 aa11.37□□□□□ -0.59
NR1I3-222ENST00000506018 RAB33AQ14088 237 aa11.37□□□□□ -0.59
NR1I3-222ENST00000506018 KARSQ15046 597 aaKnown RBP11.37□□□□□ -0.59
NR1I3-222ENST00000506018 APPL2Q8NEU8 664 aa11.37□□□□□ -0.59
NR1I3-222ENST00000506018 KCNN1Q92952 543 aa11.37□□□□□ -0.59
NR1I3-222ENST00000506018 MS4A3Q96HJ5 214 aa11.37□□□□□ -0.59
NR1I3-222ENST00000506018 TSPAN18Q96SJ8 248 aa11.37□□□□□ -0.59
NR1I3-222ENST00000506018 CLSTN3Q9BQT9 956 aa11.37□□□□□ -0.59
NR1I3-222ENST00000506018 CCSER1Q9C0I3 900 aa11.37□□□□□ -0.59
NR1I3-222ENST00000506018 ZSCAN16Q9H4T2 348 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-222ENST00000506018 GOLGA2P5Q9HBQ8 144 aa11.37□□□□□ -0.59
NR1I3-222ENST00000506018 MTRRQ9UBK8 725 aa11.37□□□□□ -0.59
NR1I3-222ENST00000506018 STK17AQ9UEE5 414 aa11.37□□□□□ -0.59
NR1I3-222ENST00000506018 FBXL21Q9UKT6 434 aa11.37□□□□□ -0.59
NR1I3-222ENST00000506018 POLIQ9UNA4 740 aa11.37□□□□□ -0.59
NR1I3-222ENST00000506018 BACE2Q9Y5Z0 518 aa11.37□□□□□ -0.59
NR1I3-222ENST00000506018 CDY1Q9Y6F8 540 aa11.37□□□□□ -0.59
NR1I3-222ENST00000506018 MYH15Q9Y2K3 1946 aa11.37□□□□□ -0.59
NR1I3-222ENST00000506018 DOCK6Q96HP0 2047 aa11.36□□□□□ -0.59
NR1I3-222ENST00000506018 NPHP3-ACAD11A0A0J9YXS1 232 aa11.36□□□□□ -0.59
NR1I3-222ENST00000506018 SYT1P21579 422 aa11.36□□□□□ -0.59
NR1I3-222ENST00000506018 FSHRP23945 695 aa11.36□□□□□ -0.59
NR1I3-222ENST00000506018 TKTP29401 623 aaKnown RBP11.36□□□□□ -0.59
NR1I3-222ENST00000506018 MARCKSP29966 332 aaPredicted RBP11.36□□□□□ -0.59
NR1I3-222ENST00000506018 AVPR2P30518 371 aa11.36□□□□□ -0.59
NR1I3-222ENST00000506018 MCM4P33991 863 aa11.36□□□□□ -0.59
NR1I3-222ENST00000506018 OR1D2P34982 312 aa11.36□□□□□ -0.59
NR1I3-222ENST00000506018 DDIT3P35638 169 aa11.36□□□□□ -0.59
NR1I3-222ENST00000506018 MCM6Q14566 821 aa11.36□□□□□ -0.59
NR1I3-222ENST00000506018 ARSHQ5FYA8 562 aa11.36□□□□□ -0.59
NR1I3-222ENST00000506018 GET4Q7L5D6 327 aaPredicted RBP11.36□□□□□ -0.59
NR1I3-222ENST00000506018 ZNF707Q96C28 371 aaPredicted RBP11.36□□□□□ -0.59
NR1I3-222ENST00000506018 ZBTB45Q96K62 511 aaPredicted RBP11.36□□□□□ -0.59
NR1I3-222ENST00000506018 CXCL16Q9H2A7 254 aa11.36□□□□□ -0.59
NR1I3-222ENST00000506018 KCNK12Q9HB15 430 aa11.36□□□□□ -0.59
NR1I3-222ENST00000506018 EPS15L1Q9UBC2 864 aa11.36□□□□□ -0.59
NR1I3-222ENST00000506018 TBX20Q9UMR3 447 aa11.36□□□□□ -0.59
NR1I3-222ENST00000506018 DUSP12Q9UNI6 340 aa11.36□□□□□ -0.59
NR1I3-222ENST00000506018 ABLIM1O14639 778 aa11.35□□□□□ -0.59
NR1I3-222ENST00000506018 LRG1P02750 347 aa11.35□□□□□ -0.59
NR1I3-222ENST00000506018 POU2F2P09086 479 aa11.35□□□□□ -0.59
NR1I3-222ENST00000506018 RFX1P22670 979 aa11.35□□□□□ -0.59
NR1I3-222ENST00000506018 BRCC3P46736 316 aa11.35□□□□□ -0.59
NR1I3-222ENST00000506018 ZNF131P52739 623 aa11.35□□□□□ -0.59
NR1I3-222ENST00000506018 NHLH1Q02575 133 aa11.35□□□□□ -0.59
NR1I3-222ENST00000506018 TCHHQ07283 1943 aa11.35□□□□□ -0.59
NR1I3-222ENST00000506018 AXDND1Q5T1B0 1012 aaPredicted RBP11.35□□□□□ -0.59
NR1I3-222ENST00000506018 RRAGBQ5VZM2 374 aa11.35□□□□□ -0.59
NR1I3-222ENST00000506018 SLFN12LQ6IEE8 588 aa11.35□□□□□ -0.59
NR1I3-222ENST00000506018 ZNF280DQ6N043 979 aa11.35□□□□□ -0.59
NR1I3-222ENST00000506018 CD302Q8IX05 232 aa11.35□□□□□ -0.59
NR1I3-222ENST00000506018 SLC7A14Q8TBB6 771 aa11.35□□□□□ -0.59
NR1I3-222ENST00000506018 ZMAT2Q96NC0 199 aaKnown RBP11.35□□□□□ -0.59
NR1I3-222ENST00000506018 OXCT2Q9BYC2 517 aaPredicted RBP11.35□□□□□ -0.59
NR1I3-222ENST00000506018 RPF1Q9H9Y2 349 aaKnown RBP11.35□□□□□ -0.59
NR1I3-222ENST00000506018 BLOC1S4Q9NUP1 217 aa11.35□□□□□ -0.59
NR1I3-222ENST00000506018 UBQLN1Q9UMX0 589 aaKnown RBP11.35□□□□□ -0.59
NR1I3-222ENST00000506018 SRPRBQ9Y5M8 271 aaKnown RBP11.35□□□□□ -0.59
NR1I3-222ENST00000506018 ARHGEF37A1IGU5 675 aa11.34□□□□□ -0.59
NR1I3-222ENST00000506018 PRRG1O14668 218 aa11.34□□□□□ -0.59
NR1I3-222ENST00000506018 OGTO15294 1046 aa11.34□□□□□ -0.59
NR1I3-222ENST00000506018 CCL16O15467 120 aa11.34□□□□□ -0.59
NR1I3-222ENST00000506018 GALR2O43603 387 aaPredicted RBP11.34□□□□□ -0.59
NR1I3-222ENST00000506018 PIGRP01833 764 aa11.34□□□□□ -0.59
NR1I3-222ENST00000506018 CXCL8P10145 99 aa11.34□□□□□ -0.59
NR1I3-222ENST00000506018 LAMP2P13473 410 aa11.34□□□□□ -0.59
NR1I3-222ENST00000506018 CYP3A5P20815 502 aa11.34□□□□□ -0.59
NR1I3-222ENST00000506018 PAX3P23760 479 aa11.34□□□□□ -0.59
NR1I3-222ENST00000506018 NUCB2P80303 420 aa11.34□□□□□ -0.59
NR1I3-222ENST00000506018 CEBPZQ03701 1054 aaKnown RBP11.34□□□□□ -0.59
NR1I3-222ENST00000506018 SOX4Q06945 474 aaPredicted RBP11.34□□□□□ -0.59
NR1I3-222ENST00000506018 RESTQ13127 1097 aa11.34□□□□□ -0.59
NR1I3-222ENST00000506018 SLC10A6Q3KNW5 377 aa11.34□□□□□ -0.59
NR1I3-222ENST00000506018 VARS2Q5ST30 1063 aaKnown RBP11.34□□□□□ -0.59
NR1I3-222ENST00000506018 CCDC73Q6ZRK6 1079 aa11.34□□□□□ -0.59
NR1I3-222ENST00000506018 MTSS1LQ765P7 747 aa11.34□□□□□ -0.59
NR1I3-222ENST00000506018 SV2BQ7L1I2 683 aa11.34□□□□□ -0.59
NR1I3-222ENST00000506018 GRASPQ7Z6J2 395 aaPredicted RBP11.34□□□□□ -0.59
NR1I3-222ENST00000506018 ELMOD1Q8N336 334 aa11.34□□□□□ -0.59
NR1I3-222ENST00000506018 SPRYD3Q8NCJ5 442 aa11.34□□□□□ -0.59
NR1I3-222ENST00000506018 C3orf58Q8NDZ4 430 aa11.34□□□□□ -0.59
NR1I3-222ENST00000506018 ZNF461Q8TAF7 563 aa11.34□□□□□ -0.59
NR1I3-222ENST00000506018 HVCN1Q96D96 273 aa11.34□□□□□ -0.59
NR1I3-222ENST00000506018 SUSD3Q96L08 255 aa11.34□□□□□ -0.59
NR1I3-222ENST00000506018 MSTO1Q9BUK6 570 aa11.34□□□□□ -0.59
NR1I3-222ENST00000506018 SEL1LQ9UBV2 794 aa11.34□□□□□ -0.59
NR1I3-222ENST00000506018 EXOC7Q9UPT5 735 aa11.34□□□□□ -0.59
NR1I3-222ENST00000506018 CLIC4Q9Y696 253 aa11.34□□□□□ -0.59
NR1I3-222ENST00000506018 I3L4J1 428 aa11.33□□□□□ -0.6
NR1I3-222ENST00000506018 STX6O43752 255 aa11.33□□□□□ -0.6
NR1I3-222ENST00000506018 GAP43P17677 238 aa11.33□□□□□ -0.6
NR1I3-222ENST00000506018 CLCN5P51795 746 aa11.33□□□□□ -0.6
NR1I3-222ENST00000506018 ARPP19P56211 112 aa11.33□□□□□ -0.6
NR1I3-222ENST00000506018 GTF2BQ00403 316 aa11.33□□□□□ -0.6
NR1I3-222ENST00000506018 GRIN1Q05586 938 aa11.33□□□□□ -0.6
NR1I3-222ENST00000506018 POSTNQ15063 836 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms