RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 GALR2O43603 387 aaPredicted RBP13.97□□□□□ -0.17
RNF4-206ENST00000504782 TBC1D4O60343 1298 aa13.97□□□□□ -0.17
RNF4-206ENST00000504782 HNRNPA1P09651 372 aaKnown RBP eCLIP13.97□□□□□ -0.17
RNF4-206ENST00000504782 UBA7P41226 1012 aa13.97□□□□□ -0.17
RNF4-206ENST00000504782 GUCY2FP51841 1108 aa13.97□□□□□ -0.17
RNF4-206ENST00000504782 SMTNP53814 917 aa13.97□□□□□ -0.17
RNF4-206ENST00000504782 ARPP19P56211 112 aa13.97□□□□□ -0.17
RNF4-206ENST00000504782 ROR1Q01973 937 aa13.97□□□□□ -0.17
RNF4-206ENST00000504782 HTR4Q13639 388 aa13.97□□□□□ -0.17
RNF4-206ENST00000504782 PTPAQ15257 358 aa13.97□□□□□ -0.17
RNF4-206ENST00000504782 LIN9Q5TKA1 542 aa13.97□□□□□ -0.17
RNF4-206ENST00000504782 SLC39A4Q6P5W5 647 aa13.97□□□□□ -0.17
RNF4-206ENST00000504782 PARM1Q6UWI2 310 aa13.97□□□□□ -0.17
RNF4-206ENST00000504782 ZPBP2Q6X784 338 aa13.97□□□□□ -0.17
RNF4-206ENST00000504782 RAD54LQ92698 747 aa13.97□□□□□ -0.17
RNF4-206ENST00000504782 CALML4Q96GE6 196 aa13.97□□□□□ -0.17
RNF4-206ENST00000504782 AK8Q96MA6 479 aa13.97□□□□□ -0.17
RNF4-206ENST00000504782 FIZ1Q96SL8 496 aa13.97□□□□□ -0.17
RNF4-206ENST00000504782 PRRX2Q99811 253 aa13.97□□□□□ -0.17
RNF4-206ENST00000504782 FOXD4L1Q9NU39 408 aa13.97□□□□□ -0.17
RNF4-206ENST00000504782 SLC38A7Q9NVC3 462 aa13.97□□□□□ -0.17
RNF4-206ENST00000504782 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.97□□□□□ -0.17
RNF4-206ENST00000504782 KCND2Q9NZV8 630 aa13.97□□□□□ -0.17
RNF4-206ENST00000504782 FBXL21Q9UKT6 434 aa13.97□□□□□ -0.17
RNF4-206ENST00000504782 BACE2Q9Y5Z0 518 aa13.97□□□□□ -0.17
RNF4-206ENST00000504782 NUMBLQ9Y6R0 609 aa13.97□□□□□ -0.17
RNF4-206ENST00000504782 TISP43B9A030 160 aa13.96□□□□□ -0.17
RNF4-206ENST00000504782 CLDN3O15551 220 aa13.96□□□□□ -0.17
RNF4-206ENST00000504782 FAM189A1O60320 539 aa13.96□□□□□ -0.17
RNF4-206ENST00000504782 SEC24AO95486 1093 aa13.96□□□□□ -0.17
RNF4-206ENST00000504782 MARCKSP29966 332 aaPredicted RBP13.96□□□□□ -0.17
RNF4-206ENST00000504782 NMT1P30419 496 aaKnown RBP13.96□□□□□ -0.17
RNF4-206ENST00000504782 LONP1P36776 959 aaKnown RBP13.96□□□□□ -0.17
RNF4-206ENST00000504782 MATR3P43243 847 aaKnown RBP eCLIP13.96□□□□□ -0.17
RNF4-206ENST00000504782 MRPL58Q14197 206 aaKnown RBP13.96□□□□□ -0.17
RNF4-206ENST00000504782 PDXDC1Q6P996 788 aa13.96□□□□□ -0.17
RNF4-206ENST00000504782 ANKS3Q6ZW76 656 aa13.96□□□□□ -0.17
RNF4-206ENST00000504782 BRAPQ7Z569 592 aa13.96□□□□□ -0.17
RNF4-206ENST00000504782 KCTD17Q8N5Z5 321 aa13.96□□□□□ -0.17
RNF4-206ENST00000504782 MYCT1Q8N699 235 aa13.96□□□□□ -0.17
RNF4-206ENST00000504782 GPR152Q8TDT2 470 aa13.96□□□□□ -0.17
RNF4-206ENST00000504782 ING5Q8WYH8 240 aa13.96□□□□□ -0.17
RNF4-206ENST00000504782 ATOH1Q92858 354 aaPredicted RBP13.96□□□□□ -0.17
RNF4-206ENST00000504782 FGF13Q92913 245 aa13.96□□□□□ -0.17
RNF4-206ENST00000504782 BICD1Q96G01 975 aa13.96□□□□□ -0.17
RNF4-206ENST00000504782 CLIC6Q96NY7 704 aa13.96□□□□□ -0.17
RNF4-206ENST00000504782 LARSQ9P2J5 1176 aaKnown RBP13.96□□□□□ -0.17
RNF4-206ENST00000504782 ODF2LQ9ULJ1 636 aa13.96□□□□□ -0.17
RNF4-206ENST00000504782 TBX20Q9UMR3 447 aa13.96□□□□□ -0.17
RNF4-206ENST00000504782 MYO15AQ9UKN7 3530 aa13.96□□□□□ -0.17
RNF4-206ENST00000504782 USP34Q70CQ2 3546 aa13.95□□□□□ -0.18
RNF4-206ENST00000504782 TTC26A0AVF1 554 aa13.95□□□□□ -0.18
RNF4-206ENST00000504782 LACTBL1A8MY62 500 aa13.95□□□□□ -0.18
RNF4-206ENST00000504782 ANKRD63C9JTQ0 380 aa13.95□□□□□ -0.18
RNF4-206ENST00000504782 K7ENM7 598 aa13.95□□□□□ -0.18
RNF4-206ENST00000504782 PPEF2O14830 753 aa13.95□□□□□ -0.18
RNF4-206ENST00000504782 TRAPPC3O43617 180 aa13.95□□□□□ -0.18
RNF4-206ENST00000504782 ABLIM3O94929 683 aa13.95□□□□□ -0.18
RNF4-206ENST00000504782 FAM13AO94988 1023 aa13.95□□□□□ -0.18
RNF4-206ENST00000504782 AOC1P19801 751 aa13.95□□□□□ -0.18
RNF4-206ENST00000504782 HOXA9P31269 272 aa13.95□□□□□ -0.18
RNF4-206ENST00000504782 RPL9P32969 192 aaKnown RBP13.95□□□□□ -0.18
RNF4-206ENST00000504782 CLCN5P51795 746 aa13.95□□□□□ -0.18
RNF4-206ENST00000504782 ZNF131P52739 623 aa13.95□□□□□ -0.18
RNF4-206ENST00000504782 CEBPZQ03701 1054 aaKnown RBP13.95□□□□□ -0.18
RNF4-206ENST00000504782 RESTQ13127 1097 aa13.95□□□□□ -0.18
RNF4-206ENST00000504782 ZBTB6Q15916 424 aa13.95□□□□□ -0.18
RNF4-206ENST00000504782 SLC5A9Q2M3M2 681 aa13.95□□□□□ -0.18
RNF4-206ENST00000504782 UVSSAQ2YD98 709 aa13.95□□□□□ -0.18
RNF4-206ENST00000504782 ZC2HC1CQ53FD0 456 aaPredicted RBP13.95□□□□□ -0.18
RNF4-206ENST00000504782 SLC8B1Q6J4K2 584 aa13.95□□□□□ -0.18
RNF4-206ENST00000504782 ZNF461Q8TAF7 563 aa13.95□□□□□ -0.18
RNF4-206ENST00000504782 DDX12PQ92771 950 aa13.95□□□□□ -0.18
RNF4-206ENST00000504782 ZHX3Q9H4I2 956 aa13.95□□□□□ -0.18
RNF4-206ENST00000504782 FBXO2Q9UK22 296 aaPredicted RBP13.95□□□□□ -0.18
RNF4-206ENST00000504782 FBXL5Q9UKA1 691 aa13.95□□□□□ -0.18
RNF4-206ENST00000504782 CDH7Q9ULB5 785 aa13.95□□□□□ -0.18
RNF4-206ENST00000504782 NUB1Q9Y5A7 615 aa13.95□□□□□ -0.18
RNF4-206ENST00000504782 TIMM13Q9Y5L4 95 aaPredicted RBP13.95□□□□□ -0.18
RNF4-206ENST00000504782 TSC2P49815 1807 aa13.94□□□□□ -0.18
RNF4-206ENST00000504782 TRAK2O60296 914 aa13.94□□□□□ -0.18
RNF4-206ENST00000504782 XYLBO75191 536 aa13.94□□□□□ -0.18
RNF4-206ENST00000504782 SRFP11831 508 aa13.94□□□□□ -0.18
RNF4-206ENST00000504782 SYT1P21579 422 aa13.94□□□□□ -0.18
RNF4-206ENST00000504782 MCM4P33991 863 aa13.94□□□□□ -0.18
RNF4-206ENST00000504782 LIG4P49917 911 aa13.94□□□□□ -0.18
RNF4-206ENST00000504782 GPC5P78333 572 aa13.94□□□□□ -0.18
RNF4-206ENST00000504782 ENOX2Q16206 610 aaKnown RBP13.94□□□□□ -0.18
RNF4-206ENST00000504782 RASSF8Q8NHQ8 419 aa13.94□□□□□ -0.18
RNF4-206ENST00000504782 LARP4BQ92615 738 aaKnown RBP13.94□□□□□ -0.18
RNF4-206ENST00000504782 KCNN1Q92952 543 aa13.94□□□□□ -0.18
RNF4-206ENST00000504782 KIF12Q96FN5 646 aa13.94□□□□□ -0.18
RNF4-206ENST00000504782 SUSD3Q96L08 255 aa13.94□□□□□ -0.18
RNF4-206ENST00000504782 CCSER1Q9C0I3 900 aa13.94□□□□□ -0.18
RNF4-206ENST00000504782 PARVGQ9HBI0 331 aa13.94□□□□□ -0.18
RNF4-206ENST00000504782 WNT16Q9UBV4 365 aa13.94□□□□□ -0.18
RNF4-206ENST00000504782 ARHGEF37A1IGU5 675 aa13.93□□□□□ -0.18
RNF4-206ENST00000504782 HNRNPDLO14979 420 aaKnown RBP13.93□□□□□ -0.18
RNF4-206ENST00000504782 SYN3O14994 580 aa13.93□□□□□ -0.18
RNF4-206ENST00000504782 SLC26A4O43511 780 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms